Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1574

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
1,809,279	-		Echvi_1573	0.44	+0.0
1,809,322	-		Echvi_1573	0.48	+0.1
1,809,322	-		Echvi_1573	0.48	-0.8
1,809,360	+		Echvi_1573	0.51	+0.3
1,809,370	-		Echvi_1573	0.51	+0.0
1,809,385	-		Echvi_1573	0.53	+0.5
1,809,398	-		Echvi_1573	0.54	-0.2
1,809,398	-		Echvi_1573	0.54	+0.5
1,809,431	+		Echvi_1573	0.56	-1.2
1,809,452	+		Echvi_1573	0.58	-0.3
1,809,452	+		Echvi_1573	0.58	-0.4
1,809,452	+		Echvi_1573	0.58	-2.2
1,809,453	-		Echvi_1573	0.58	-0.1
1,809,492	-		Echvi_1573	0.61	+0.8
1,809,584	-		Echvi_1573	0.68	-0.1
1,809,601	-				-0.3
1,809,701	+		Echvi_1573	0.77	-0.7
1,809,702	-		Echvi_1573	0.77	+0.1
1,809,806	+		Echvi_1573	0.85	-0.2
1,809,806	+		Echvi_1573	0.85	+0.7
1,810,102	+				-1.1
1,810,102	+				-0.7
1,810,103	-				+0.4
1,810,103	-				+0.6
1,810,104	+				-0.2
1,810,105	-				+0.3
1,810,105	-				-1.4
1,810,105	-				+0.4
1,810,143	+				+1.1
1,810,191	+				-1.8
1,810,222	+				-0.0
1,810,222	+				-0.3
1,810,270	-				-0.6
1,810,309	+				-0.2
1,810,310	-				+1.1
1,810,332	-				+0.3
1,810,405	+		Echvi_1574	0.13	+0.7
1,810,416	+		Echvi_1574	0.13	+0.7
1,810,416	+		Echvi_1574	0.13	+0.2
1,810,443	-		Echvi_1574	0.15	+0.5
1,810,472	+		Echvi_1574	0.18	-0.3
1,810,473	-		Echvi_1574	0.18	-0.4
1,810,473	-		Echvi_1574	0.18	+0.3
1,810,489	-		Echvi_1574	0.19	-0.0
1,810,489	-		Echvi_1574	0.19	-0.0
1,810,492	+		Echvi_1574	0.19	-0.7
1,810,492	+		Echvi_1574	0.19	+0.1
1,810,492	+		Echvi_1574	0.19	-0.4
1,810,493	-		Echvi_1574	0.19	-1.9
1,810,493	-		Echvi_1574	0.19	+1.4
1,810,493	-		Echvi_1574	0.19	+2.0
1,810,527	-		Echvi_1574	0.22	-0.7
1,810,527	-		Echvi_1574	0.22	-0.8
1,810,529	-		Echvi_1574	0.22	-0.8
1,810,718	+		Echvi_1574	0.36	-3.2
1,810,719	-		Echvi_1574	0.36	-0.8
1,810,735	+		Echvi_1574	0.37	-1.0
1,810,778	-		Echvi_1574	0.40	+0.4
1,810,808	+		Echvi_1574	0.43	+0.8
1,810,808	+		Echvi_1574	0.43	+0.0
1,810,860	+		Echvi_1574	0.46	+1.3
1,810,877	+		Echvi_1574	0.48	-1.6
1,810,878	-		Echvi_1574	0.48	-1.3
1,810,878	-		Echvi_1574	0.48	+1.0
1,810,952	+		Echvi_1574	0.53	+0.6
1,810,990	+		Echvi_1574	0.56	-0.4
1,810,997	-		Echvi_1574	0.57	+0.1
1,811,131	+		Echvi_1574	0.67	-0.1
1,811,131	+		Echvi_1574	0.67	+1.0
1,811,132	-		Echvi_1574	0.67	+0.1
1,811,132	-		Echvi_1574	0.67	+2.5
1,811,132	-		Echvi_1574	0.67	+1.1
1,811,132	-		Echvi_1574	0.67	-0.1
1,811,135	+		Echvi_1574	0.67	-0.2
1,811,136	-		Echvi_1574	0.67	+0.4
1,811,238	+		Echvi_1574	0.74	+2.0
1,811,239	-		Echvi_1574	0.75	+1.0
1,811,239	-		Echvi_1574	0.75	-0.4
1,811,239	-		Echvi_1574	0.75	+0.5
1,811,263	+		Echvi_1574	0.76	+0.9
1,811,263	+		Echvi_1574	0.76	-0.3
1,811,263	+		Echvi_1574	0.76	+1.4
1,811,263	+		Echvi_1574	0.76	+3.0
1,811,263	+		Echvi_1574	0.76	+0.6
1,811,264	-		Echvi_1574	0.76	-0.9
1,811,264	-		Echvi_1574	0.76	+0.8
1,811,264	-		Echvi_1574	0.76	+0.5
1,811,264	-		Echvi_1574	0.76	-0.8
1,811,345	+		Echvi_1574	0.82	-1.2
1,811,432	-		Echvi_1574	0.89	-1.3
1,811,464	+				-0.1
1,811,476	-				+1.6
1,811,476	-				+0.2
1,811,480	+				+0.7
1,811,481	-				+0.2
1,811,481	-				+0.1
1,811,481	-				+0.4
1,811,484	-				+1.0
1,811,484	-				+0.1
1,811,580	-				+2.2
1,811,600	-				-1.2
1,811,603	+				-0.6
1,811,604	-				-1.2
1,811,640	+				-0.2
1,811,703	-				+0.6
1,811,739	+				+0.5
1,811,739	+				+0.8
1,811,750	-				+0.3
1,811,824	+		Echvi_1575	0.11	-0.1
1,811,824	+		Echvi_1575	0.11	+0.2
1,811,824	+		Echvi_1575	0.11	-1.1
1,811,825	-		Echvi_1575	0.11	-0.5
1,811,865	-		Echvi_1575	0.18	-0.4
1,811,865	-		Echvi_1575	0.18	-0.6
1,811,901	-		Echvi_1575	0.25	+0.2
1,811,917	-		Echvi_1575	0.28	+0.2
1,811,917	-		Echvi_1575	0.28	+0.5
1,811,917	-		Echvi_1575	0.28	+0.4
1,812,035	+		Echvi_1575	0.49	-0.7
1,812,048	-		Echvi_1575	0.51	+2.4
1,812,143	+		Echvi_1575	0.68	+0.2
1,812,143	+		Echvi_1575	0.68	-1.3
1,812,144	-		Echvi_1575	0.69	+0.0
1,812,144	-		Echvi_1575	0.69	-1.0
1,812,195	+		Echvi_1575	0.78	+1.3
1,812,196	-		Echvi_1575	0.78	-0.1
1,812,196	-		Echvi_1575	0.78	+0.1
1,812,196	-		Echvi_1575	0.78	-0.1
1,812,198	-		Echvi_1575	0.78	+1.2
1,812,229	+		Echvi_1575	0.84	-1.2
1,812,229	+		Echvi_1575	0.84	-0.2
1,812,229	+		Echvi_1575	0.84	+1.1
1,812,230	-		Echvi_1575	0.84	+0.7
1,812,230	-		Echvi_1575	0.84	+0.4
1,812,230	-		Echvi_1575	0.84	-0.5
1,812,246	+		Echvi_1575	0.87	-1.1
1,812,246	+		Echvi_1575	0.87	-0.2
1,812,246	+		Echvi_1575	0.87	+0.5
1,812,246	+		Echvi_1575	0.87	-1.9
1,812,246	+		Echvi_1575	0.87	+0.9
1,812,246	+		Echvi_1575	0.87	-0.1
1,812,247	-		Echvi_1575	0.87	-0.8
1,812,247	-		Echvi_1575	0.87	+0.7
1,812,247	-		Echvi_1575	0.87	+0.5
1,812,247	-		Echvi_1575	0.87	-0.3
1,812,250	+		Echvi_1575	0.88	+0.6
1,812,250	+		Echvi_1575	0.88	-0.8
1,812,250	+		Echvi_1575	0.88	-0.8
1,812,250	+		Echvi_1575	0.88	-0.6
1,812,251	-		Echvi_1575	0.88	+0.8
1,812,251	-		Echvi_1575	0.88	-0.9
1,812,251	-		Echvi_1575	0.88	-1.6
1,812,252	+		Echvi_1575	0.88	+0.6
1,812,252	+		Echvi_1575	0.88	-0.4
1,812,253	-		Echvi_1575	0.88	+1.0
1,812,254	+		Echvi_1575	0.88	+0.1
1,812,254	+		Echvi_1575	0.88	-0.9
1,812,254	+		Echvi_1575	0.88	+1.2
1,812,254	+		Echvi_1575	0.88	-0.0
1,812,255	-		Echvi_1575	0.89	-0.3
1,812,255	-		Echvi_1575	0.89	-0.6
1,812,255	-		Echvi_1575	0.89	+0.6
1,812,271	-				+0.2
1,812,287	+				-1.0
1,812,287	+				+3.0
1,812,288	-				+1.2
1,812,336	+				+0.7
1,812,336	+				+1.7
1,812,337	-				+0.7
1,812,341	-				+1.7
1,812,369	+				+1.7
1,812,392	+				-0.7
1,812,392	+				+0.5
1,812,392	+				+0.1
1,812,393	-				-0.3
1,812,422	+				+0.3
1,812,423	-				-0.0
1,812,424	+				+0.6
1,812,434	+				-0.2
1,812,435	-				+0.3
1,812,480	+				-0.6
1,812,550	+				-0.6
1,812,551	-				-0.9
1,812,555	+				+0.4