Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1519

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
1,742,918	-				-0.8
1,742,926	+				-4.3
1,742,926	+				-0.8
1,742,926	+				-1.7
1,742,926	+				-1.0
1,742,927	-				-1.0
1,742,927	-				-3.3
1,742,929	+				-1.2
1,742,930	-				-2.9
1,743,042	-				-1.5
1,743,043	+				+0.4
1,743,044	-				-3.1
1,743,044	-				-0.8
1,743,185	+		Echvi_1519	0.19	+0.0
1,743,185	+		Echvi_1519	0.19	-1.8
1,743,186	-		Echvi_1519	0.19	+0.4
1,743,186	-		Echvi_1519	0.19	-1.0
1,743,187	+		Echvi_1519	0.19	-1.2
1,743,187	+		Echvi_1519	0.19	-2.7
1,743,187	+		Echvi_1519	0.19	-2.5
1,743,265	-		Echvi_1519	0.25	-0.6
1,743,306	+		Echvi_1519	0.28	+0.0
1,743,307	-		Echvi_1519	0.28	-3.2
1,743,453	+		Echvi_1519	0.39	+0.0
1,743,513	+		Echvi_1519	0.44	-3.1
1,743,514	-		Echvi_1519	0.44	-1.7
1,743,543	-				+0.4
1,743,543	-		Echvi_1519	0.46	-1.5
1,743,544	+		Echvi_1519	0.46	-1.3
1,743,544	+		Echvi_1519	0.46	-0.6
1,743,544	+		Echvi_1519	0.46	-2.3
1,743,544	+		Echvi_1519	0.46	-0.3
1,743,544	+		Echvi_1519	0.46	-0.9
1,743,545	-		Echvi_1519	0.46	+0.4
1,743,563	+		Echvi_1519	0.47	+0.4
1,743,652	-		Echvi_1519	0.54	-1.6
1,743,657	-		Echvi_1519	0.54	-1.0
1,743,685	-		Echvi_1519	0.57	-3.5
1,743,835	-		Echvi_1519	0.68	-0.8
1,743,920	+		Echvi_1519	0.74	-0.6
1,744,006	+		Echvi_1519	0.81	-0.3
1,744,006	+		Echvi_1519	0.81	-1.8
1,744,011	+		Echvi_1519	0.81	-2.7
1,744,012	-		Echvi_1519	0.81	-3.2
1,744,135	+				-3.5
1,744,285	+				-0.6
1,744,285	+				-1.9
1,744,285	+				-0.6
1,744,285	+				-2.3
1,744,286	-				-0.2
1,744,286	-				-2.1
1,744,286	-				-2.1
1,744,287	+				-1.0
1,744,384	+				-0.8
1,744,390	+				+0.7
1,744,391	-				+0.0
1,744,424	+				+0.3
1,744,425	-				+0.0
1,744,449	+				-0.4
1,744,449	+				+3.0
1,744,450	-				-0.3
1,744,454	-				-0.9
1,744,454	-				+0.1
1,744,454	-				-0.6
1,744,454	-				+0.9
1,744,455	+				+1.1
1,744,653	-		Echvi_1520	0.40	+1.4
1,744,653	-		Echvi_1520	0.40	+1.1
1,744,668	-		Echvi_1520	0.42	+0.7
1,744,752	-		Echvi_1520	0.57	+2.1
1,744,775	+		Echvi_1520	0.61	-0.2
1,744,776	-		Echvi_1520	0.61	-0.6
1,744,808	-		Echvi_1520	0.66	+1.0
1,744,823	+		Echvi_1520	0.69	+1.8
1,744,880	+		Echvi_1520	0.79	+1.1
1,744,880	+		Echvi_1520	0.79	+2.0
1,744,881	-		Echvi_1520	0.79	+1.1
1,744,887	-		Echvi_1520	0.80	+1.8
1,745,019	-				-0.4
1,745,020	+				-1.3
1,745,021	-				+0.4
1,745,025	+				-0.7
1,745,092	+				+1.0
1,745,098	+				-0.4
1,745,130	+				+0.8
1,745,133	+				+0.1
1,745,133	+				-1.2
1,745,133	+				-0.3
1,745,133	+				+0.4
1,745,133	+				+0.6
1,745,133	+				-0.3
1,745,134	-				+0.1
1,745,134	-				-0.4
1,745,190	-				-0.1
1,745,190	-				+0.3
1,745,230	+		Echvi_1521	0.13	-0.9
1,745,230	+		Echvi_1521	0.13	-0.2
1,745,231	-		Echvi_1521	0.13	-0.3