Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1515

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
1,737,255	-		Echvi_1513	0.63	-0.3
1,737,278	+		Echvi_1513	0.66	+0.2
1,737,278	+		Echvi_1513	0.66	-0.5
1,737,278	+		Echvi_1513	0.66	+0.3
1,737,278	+		Echvi_1513	0.66	-0.6
1,737,279	-		Echvi_1513	0.66	-1.6
1,737,282	+		Echvi_1513	0.66	-3.1
1,737,282	+		Echvi_1513	0.66	-1.1
1,737,298	+		Echvi_1513	0.67	-0.5
1,737,299	-		Echvi_1513	0.67	-1.3
1,737,302	+		Echvi_1513	0.68	-0.5
1,737,363	+		Echvi_1513	0.73	+1.0
1,737,501	-		Echvi_1513	0.85	+0.2
1,737,501	-		Echvi_1513	0.85	-0.5
1,737,524	+		Echvi_1513	0.87	+0.9
1,737,524	+		Echvi_1513	0.87	+0.6
1,737,525	-		Echvi_1513	0.87	+1.3
1,737,539	-		Echvi_1513	0.89	+0.4
1,737,586	-				-0.7
1,737,602	+				+0.7
1,737,632	+				-1.8
1,737,633	-				+0.4
1,737,668	+				-1.0
1,737,669	-				+0.4
1,737,673	-				-0.3
1,737,712	-				+1.3
1,737,797	-				-1.0
1,737,798	+				+0.4
1,737,799	-				+2.7
1,737,799	-				-2.3
1,737,799	-				-1.0
1,737,799	-				+2.0
1,737,819	+				+0.3
1,737,819	+				-1.0
1,737,820	-				-0.0
1,737,821	+				-0.6
1,737,869	-				+0.3
1,737,900	+				-1.0
1,737,900	+				+3.0
1,737,988	-		Echvi_1514	0.34	+0.4
1,738,020	+		Echvi_1514	0.47	-0.1
1,738,020	+		Echvi_1514	0.47	-1.7
1,738,020	+		Echvi_1514	0.47	-0.1
1,738,021	-		Echvi_1514	0.47	+0.0
1,738,021	-		Echvi_1514	0.47	+1.4
1,738,021	-		Echvi_1514	0.47	-0.1
1,738,021	-		Echvi_1514	0.47	+0.9
1,738,076	+		Echvi_1514	0.69	+0.6
1,738,084	-		Echvi_1514	0.72	-2.3
1,738,084	-		Echvi_1514	0.72	-0.9
1,738,117	+		Echvi_1514	0.86	-0.7
1,738,117	+		Echvi_1514	0.86	-0.1
1,738,117	+		Echvi_1514	0.86	-0.8
1,738,150	+				+1.7
1,738,172	-				+0.2
1,738,181	-				-0.3
1,738,188	-				+1.0
1,738,188	-				+0.2
1,738,189	+				+0.7
1,738,189	+				-1.5
1,738,190	-				-0.8
1,738,195	+				-1.6
1,738,196	-				+0.4
1,738,230	-				+2.6
1,738,230	-				-3.0
1,738,230	-				+0.2
1,738,237	-				+1.4
1,738,248	+				+1.2
1,738,248	+				+2.1
1,738,249	-				-0.4
1,738,249	-				+0.7
1,738,249	-				+0.3
1,738,249	-				-0.1
1,738,259	+				+0.3
1,738,259	+				-0.5
1,738,259	+				-0.4
1,738,260	-				-0.5
1,738,260	-				+0.0
1,738,284	-				+0.9
1,738,308	+				-0.2
1,738,319	+				-0.2
1,738,320	-				-0.2
1,738,320	-				+0.4
1,738,362	+		Echvi_1515	0.12	+0.2
1,738,363	-		Echvi_1515	0.12	-0.4
1,738,372	-		Echvi_1515	0.13	-0.3
1,738,403	+		Echvi_1515	0.15	+0.3
1,738,403	+		Echvi_1515	0.15	-0.7
1,738,407	+		Echvi_1515	0.16	+0.3
1,738,407	+		Echvi_1515	0.16	-0.3
1,738,407	+		Echvi_1515	0.16	+0.0
1,738,407	+		Echvi_1515	0.16	+0.5
1,738,407	+		Echvi_1515	0.16	-0.9
1,738,408	-		Echvi_1515	0.16	+0.7
1,738,408	-		Echvi_1515	0.16	+0.9
1,738,408	-		Echvi_1515	0.16	-1.6
1,738,408	-		Echvi_1515	0.16	-1.7
1,738,408	-		Echvi_1515	0.16	+0.4
1,738,408	-		Echvi_1515	0.16	-0.5
1,738,408	-		Echvi_1515	0.16	+1.0
1,738,408	-		Echvi_1515	0.16	+1.4
1,738,408	-		Echvi_1515	0.16	+0.8
1,738,411	+		Echvi_1515	0.16	+0.6
1,738,412	-		Echvi_1515	0.16	-0.1
1,738,479	-		Echvi_1515	0.23	-0.6
1,738,503	+		Echvi_1515	0.25	+2.3
1,738,504	-		Echvi_1515	0.25	-1.6
1,738,504	-		Echvi_1515	0.25	+0.9
1,738,504	-		Echvi_1515	0.25	+0.7
1,738,504	-		Echvi_1515	0.25	-1.5
1,738,518	-		Echvi_1515	0.26	-2.9
1,738,522	-		Echvi_1515	0.27	-0.5
1,738,524	-		Echvi_1515	0.27	-2.2
1,738,524	-		Echvi_1515	0.27	+0.7
1,738,598	+		Echvi_1515	0.34	+1.0
1,738,599	-		Echvi_1515	0.34	+0.1
1,738,607	-		Echvi_1515	0.35	-1.9
1,738,607	-		Echvi_1515	0.35	-0.2
1,738,608	+		Echvi_1515	0.35	-0.6
1,738,614	+		Echvi_1515	0.35	-0.3
1,738,614	+		Echvi_1515	0.35	-0.7
1,738,614	+		Echvi_1515	0.35	-1.4
1,738,614	+		Echvi_1515	0.35	-0.5
1,738,614	+		Echvi_1515	0.35	+0.9
1,738,615	-		Echvi_1515	0.35	+1.5
1,738,615	-		Echvi_1515	0.35	-0.9
1,738,615	-		Echvi_1515	0.35	+1.0
1,738,621	+		Echvi_1515	0.36	+1.1
1,738,622	-		Echvi_1515	0.36	-0.8
1,738,622	-		Echvi_1515	0.36	+0.4
1,738,698	-		Echvi_1515	0.43	+0.6
1,738,702	+		Echvi_1515	0.43	-0.5
1,738,702	+		Echvi_1515	0.43	+0.0
1,738,714	-		Echvi_1515	0.45	-0.6
1,738,734	-		Echvi_1515	0.46	-0.2
1,738,734	-		Echvi_1515	0.46	+0.3
1,738,758	+		Echvi_1515	0.49	-0.8
1,738,758	+		Echvi_1515	0.49	+1.0
1,738,758	+		Echvi_1515	0.49	-0.6
1,738,758	+		Echvi_1515	0.49	-0.9
1,738,758	+		Echvi_1515	0.49	-0.3
1,738,759	-		Echvi_1515	0.49	+0.2
1,738,759	-		Echvi_1515	0.49	+0.3
1,738,759	-		Echvi_1515	0.49	+0.0
1,738,759	-		Echvi_1515	0.49	+1.0
1,738,759	-		Echvi_1515	0.49	+0.0
1,738,759	-		Echvi_1515	0.49	+2.3
1,738,797	-		Echvi_1515	0.52	-0.5
1,738,837	+		Echvi_1515	0.56	-0.2
1,738,837	+		Echvi_1515	0.56	+0.0
1,738,838	-		Echvi_1515	0.56	+1.8
1,738,838	-		Echvi_1515	0.56	+0.2
1,738,838	-		Echvi_1515	0.56	+2.7
1,738,842	+		Echvi_1515	0.56	-0.6
1,738,850	+		Echvi_1515	0.57	-0.8
1,738,861	+		Echvi_1515	0.58	+0.1
1,738,869	+		Echvi_1515	0.59	-0.9
1,738,869	+		Echvi_1515	0.59	+1.0
1,738,904	+		Echvi_1515	0.62	-2.1
1,738,905	-		Echvi_1515	0.62	+0.6
1,738,905	-		Echvi_1515	0.62	+1.6
1,738,941	+		Echvi_1515	0.66	+0.2
1,738,941	+		Echvi_1515	0.66	+2.0
1,738,942	-		Echvi_1515	0.66	+0.7
1,738,943	+		Echvi_1515	0.66	-0.1
1,738,943	+		Echvi_1515	0.66	-1.0
1,738,946	+		Echvi_1515	0.66	+0.3
1,738,946	+		Echvi_1515	0.66	+0.7
1,738,946	+		Echvi_1515	0.66	-1.9
1,738,946	+		Echvi_1515	0.66	-2.0
1,738,946	+		Echvi_1515	0.66	-0.1
1,738,946	+		Echvi_1515	0.66	-0.9
1,738,946	+		Echvi_1515	0.66	+0.4
1,738,947	-		Echvi_1515	0.66	-0.2
1,738,947	-		Echvi_1515	0.66	+0.0
1,738,947	-		Echvi_1515	0.66	+0.4
1,738,947	-		Echvi_1515	0.66	+0.7
1,738,950	+		Echvi_1515	0.67	-0.1
1,738,959	+		Echvi_1515	0.67	-0.6
1,738,959	+		Echvi_1515	0.67	-0.1
1,738,964	+		Echvi_1515	0.68	-0.2
1,738,964	+		Echvi_1515	0.68	-0.6
1,738,964	+		Echvi_1515	0.68	+0.5
1,738,964	+		Echvi_1515	0.68	+0.5
1,738,964	+		Echvi_1515	0.68	-1.3
1,738,967	-		Echvi_1515	0.68	-1.3
1,738,982	+		Echvi_1515	0.70	-1.5
1,738,990	+		Echvi_1515	0.70	-0.2
1,738,992	+		Echvi_1515	0.70	+0.3
1,738,993	-		Echvi_1515	0.71	+0.5
1,739,023	+		Echvi_1515	0.73	-0.8
1,739,025	+		Echvi_1515	0.74	+1.7
1,739,025	+		Echvi_1515	0.74	+2.4
1,739,026	-		Echvi_1515	0.74	+0.3
1,739,026	-		Echvi_1515	0.74	-0.6
1,739,026	-		Echvi_1515	0.74	-2.7
1,739,026	-		Echvi_1515	0.74	-0.1
1,739,046	+		Echvi_1515	0.76	-0.2
1,739,052	+		Echvi_1515	0.76	+1.0
1,739,052	+		Echvi_1515	0.76	+0.0
1,739,052	+		Echvi_1515	0.76	+0.3
1,739,053	-		Echvi_1515	0.76	+0.0
1,739,053	-		Echvi_1515	0.76	-0.1
1,739,055	+		Echvi_1515	0.76	+0.5
1,739,056	-		Echvi_1515	0.76	+0.2
1,739,061	-		Echvi_1515	0.77	+1.0
1,739,075	-		Echvi_1515	0.78	+0.2
1,739,075	-		Echvi_1515	0.78	+0.1
1,739,105	+		Echvi_1515	0.81	-0.5
1,739,106	-		Echvi_1515	0.81	-1.2
1,739,110	+		Echvi_1515	0.82	+2.0
1,739,110	+		Echvi_1515	0.82	+1.3
1,739,135	+		Echvi_1515	0.84	-2.3
1,739,139	+		Echvi_1515	0.84	+1.2
1,739,139	+		Echvi_1515	0.84	-1.7
1,739,140	-		Echvi_1515	0.84	+1.5
1,739,175	-		Echvi_1515	0.88	+1.8
1,739,185	+		Echvi_1515	0.89	+0.0
1,739,186	-		Echvi_1515	0.89	+0.9
1,739,186	-		Echvi_1515	0.89	+1.8
1,739,186	-		Echvi_1515	0.89	+1.0
1,739,190	-		Echvi_1515	0.89	+1.2
1,739,225	-				+0.6
1,739,255	+				+1.0
1,739,255	+				-0.6
1,739,256	-				+0.6
1,739,256	-				-0.3
1,739,256	-				+0.4
1,739,256	-				+1.2
1,739,256	-				+0.7
1,739,256	-				+0.7
1,739,256	-				-0.4
1,739,257	+				+0.4
1,739,257	+				+0.4
1,739,258	-				-1.3
1,739,258	-				+0.3
1,739,258	-				+0.6
1,739,268	+				-1.6
1,739,272	-				+0.4
1,739,272	-				-0.6
1,739,314	+				+0.0
1,739,345	-				+1.2
1,739,362	+				+2.2
1,739,366	-				-0.2
1,739,366	-				+1.5
1,739,411	+				+0.1
1,739,411	+				-0.4
1,739,411	+				+0.3
1,739,412	-				-0.3
1,739,412	-				+1.0
1,739,421	+				+0.4
1,739,421	+				-1.1
1,739,422	-				+0.0
1,739,422	-				+0.0
1,739,422	-				+0.3
1,739,445	-				+1.1
1,739,445	-				-0.6
1,739,482	+				+0.4
1,739,483	-				+2.0
1,739,523	+				+0.8
1,739,524	-				+1.0
1,739,524	-				+1.2
1,739,524	-				+0.6
1,739,686	+				+0.5
1,739,703	-				-0.5
1,739,713	+				+0.9
1,739,714	-				+0.5
1,739,714	-				+0.4
1,739,714	-				+1.1
1,739,748	+				-0.1
1,739,748	+				-1.1
1,739,749	-				+0.1
1,739,752	+				+0.4
1,739,777	-				-0.1
1,739,801	+				-0.7
1,739,802	-				-0.9
1,739,805	+				-0.2
1,739,806	-				-2.0
1,739,860	+				+0.7
1,739,860	+				+0.3
1,739,860	+				+1.3
1,739,861	-				-1.6
1,739,861	-				+2.6
1,739,861	-				-0.1
1,739,861	-				+1.9
1,739,865	-				-0.2
1,739,914	-				+0.1
1,740,019	+				+0.1
1,740,020	-				+0.5
1,740,035	-				+1.0
1,740,074	-				+0.5
1,740,074	-				+1.3
1,740,079	+				-1.8
1,740,079	+				-1.6
1,740,139	+		Echvi_1516	0.32	-0.6
1,740,139	+		Echvi_1516	0.32	-0.5
1,740,237	-		Echvi_1516	0.84	-1.2
1,740,240	+		Echvi_1516	0.86	+0.2
1,740,241	-		Echvi_1516	0.86	-0.6
1,740,241	-		Echvi_1516	0.86	+0.4
1,740,241	-		Echvi_1516	0.86	-3.0
1,740,252	-				+0.0
1,740,252	-				-0.9
1,740,256	+				-2.2
1,740,257	-				-1.7
1,740,261	+				-3.3
1,740,261	+				-2.5
1,740,261	+				+0.6
1,740,261	+				-1.7
1,740,262	-				+0.0
1,740,262	-				-0.7
1,740,262	-				-1.8
1,740,275	+				+0.3
1,740,275	+				-0.8
1,740,275	+				-0.7
1,740,276	-				-1.7
1,740,276	-				-2.5
1,740,281	+				-1.7
1,740,297	+				-1.8