Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1501

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
1,724,105	+		Echvi_1500	0.74	-0.1
1,724,126	-		Echvi_1500	0.75	-0.3
1,724,200	+		Echvi_1500	0.77	+0.2
1,724,201	-		Echvi_1500	0.78	-1.5
1,724,201	-		Echvi_1500	0.78	-0.5
1,724,201	-		Echvi_1500	0.78	+0.7
1,724,290	+		Echvi_1500	0.81	-1.7
1,724,290	+		Echvi_1500	0.81	-0.9
1,724,316	-		Echvi_1500	0.82	-0.6
1,724,316	-		Echvi_1500	0.82	+0.3
1,724,317	+		Echvi_1500	0.82	+0.4
1,724,317	+		Echvi_1500	0.82	-0.2
1,724,317	+		Echvi_1500	0.82	+0.3
1,724,317	+		Echvi_1500	0.82	-0.8
1,724,317	+		Echvi_1500	0.82	+1.2
1,724,317	+		Echvi_1500	0.82	+0.5
1,724,318	-		Echvi_1500	0.82	+0.6
1,724,318	-		Echvi_1500	0.82	-0.1
1,724,318	-		Echvi_1500	0.82	+1.5
1,724,318	-		Echvi_1500	0.82	+1.1
1,724,318	-		Echvi_1500	0.82	-0.8
1,724,318	-		Echvi_1500	0.82	-0.1
1,724,361	-		Echvi_1500	0.83	+1.0
1,724,361	-		Echvi_1500	0.83	+0.4
1,724,395	+		Echvi_1500	0.85	-1.2
1,724,395	+		Echvi_1500	0.85	+0.6
1,724,395	+		Echvi_1500	0.85	-1.8
1,724,395	+		Echvi_1500	0.85	+0.1
1,724,395	+		Echvi_1500	0.85	-2.3
1,724,396	-		Echvi_1500	0.85	-2.0
1,724,396	-		Echvi_1500	0.85	+0.1
1,724,399	+		Echvi_1500	0.85	-0.6
1,724,400	-		Echvi_1500	0.85	+0.8
1,724,400	-		Echvi_1500	0.85	+0.3
1,724,401	+		Echvi_1500	0.85	-0.7
1,724,408	+		Echvi_1500	0.85	-0.9
1,724,453	-		Echvi_1500	0.87	-0.8
1,724,515	+		Echvi_1500	0.89	-1.1
1,724,519	-		Echvi_1500	0.89	+0.3
1,724,519	-		Echvi_1500	0.89	+0.1
1,724,589	-				-0.9
1,724,639	-				-0.6
1,724,676	-				-0.1
1,724,702	+				+0.1
1,724,702	+				+0.8
1,724,702	+				-0.6
1,724,702	+				+1.8
1,724,702	+				-1.5
1,724,702	+				-0.1
1,724,703	-				-0.7
1,724,711	+				+1.0
1,724,712	-				-1.1
1,724,732	+				-0.6
1,724,732	+				+0.4
1,724,733	-				-0.3
1,724,733	-				+0.7
1,724,733	-				-0.5
1,724,754	+				-0.8
1,724,755	-				-0.9
1,724,764	+				-1.2
1,724,765	-				-0.1
1,724,829	+				+1.6
1,724,835	+				-1.1
1,724,835	+				+0.9
1,724,835	+				-3.0
1,724,836	-				-0.2
1,724,836	-				-0.3
1,724,836	-				+0.5
1,724,891	-				+0.4
1,724,912	+				+0.2
1,724,918	+				-0.5
1,724,935	-				+0.5
1,724,952	+				-0.8
1,724,953	-				+1.2
1,724,975	+				+1.0
1,724,975	+				-1.6
1,724,998	+				+1.1
1,724,998	+				+0.9
1,724,999	-				+0.6
1,725,004	+				+0.3
1,725,005	-				+0.5
1,725,005	-				+0.4
1,725,019	+				+0.3
1,725,080	+		Echvi_1501	0.12	+1.0
1,725,080	+		Echvi_1501	0.12	-0.4
1,725,080	+		Echvi_1501	0.12	+0.1
1,725,081	-		Echvi_1501	0.12	-0.2
1,725,081	-		Echvi_1501	0.12	-0.7
1,725,081	-		Echvi_1501	0.12	-0.5
1,725,081	-		Echvi_1501	0.12	-0.0
1,725,148	+		Echvi_1501	0.23	+0.1
1,725,149	-		Echvi_1501	0.23	+0.6
1,725,174	+		Echvi_1501	0.27	+0.5
1,725,174	+		Echvi_1501	0.27	+0.0
1,725,175	-		Echvi_1501	0.28	-0.6
1,725,175	-		Echvi_1501	0.28	-0.4
1,725,304	-		Echvi_1501	0.48	-1.9
1,725,310	-		Echvi_1501	0.49	+0.5
1,725,310	-		Echvi_1501	0.49	+0.5
1,725,314	+		Echvi_1501	0.50	+0.4
1,725,315	-		Echvi_1501	0.50	-0.2
1,725,315	-		Echvi_1501	0.50	+0.1
1,725,315	-		Echvi_1501	0.50	+0.9
1,725,315	-		Echvi_1501	0.50	-0.4
1,725,316	+		Echvi_1501	0.50	+1.0
1,725,316	+		Echvi_1501	0.50	+0.2
1,725,393	+		Echvi_1501	0.63	-0.5
1,725,490	+		Echvi_1501	0.78	-0.0
1,725,491	-		Echvi_1501	0.79	+0.6
1,725,519	+		Echvi_1501	0.83	+3.0
1,725,521	+		Echvi_1501	0.83	+0.9
1,725,521	+		Echvi_1501	0.83	+0.9
1,725,521	+		Echvi_1501	0.83	+0.9
1,725,521	+		Echvi_1501	0.83	-0.7
1,725,522	-		Echvi_1501	0.84	+0.4
1,725,527	+		Echvi_1501	0.84	+1.3
1,725,527	+		Echvi_1501	0.84	-0.8
1,725,528	-		Echvi_1501	0.85	-1.0
1,725,528	-		Echvi_1501	0.85	-0.2
1,725,529	+		Echvi_1501	0.85	+0.3
1,725,543	+		Echvi_1501	0.87	+0.5
1,725,559	+		Echvi_1501	0.90	-2.4
1,725,559	+		Echvi_1501	0.90	+2.0
1,725,560	-		Echvi_1501	0.90	+1.2
1,725,565	-				+0.8
1,725,588	-				-0.6
1,725,617	-				+0.4
1,725,677	+				-0.0
1,725,683	+				+0.7
1,725,849	+		Echvi_1502	0.30	-1.7
1,725,893	-		Echvi_1502	0.39	-2.0
1,725,893	-		Echvi_1502	0.39	+1.5
1,725,893	-		Echvi_1502	0.39	+1.3
1,725,917	-		Echvi_1502	0.44	+0.4
1,725,972	+		Echvi_1502	0.55	-0.1
1,726,009	-		Echvi_1502	0.62	+0.0
1,726,121	-		Echvi_1502	0.85	-1.5
1,726,125	-		Echvi_1502	0.85	-1.6
1,726,136	-		Echvi_1502	0.88	+0.6
1,726,191	+				+1.0
1,726,191	+				-0.7
1,726,192	-				-0.0
1,726,261	+				+0.7
1,726,268	+				-0.0
1,726,269	-				-0.3
1,726,269	-				-0.4
1,726,282	+				+1.4
1,726,283	-				-0.3
1,726,283	-				+0.5
1,726,368	+		Echvi_1503	0.20	+0.4
1,726,369	-		Echvi_1503	0.20	+0.6
1,726,396	-		Echvi_1503	0.25	-0.3
1,726,494	+		Echvi_1503	0.46	+3.0
1,726,494	+		Echvi_1503	0.46	+0.4
1,726,618	+		Echvi_1503	0.71	-0.6
1,726,618	+		Echvi_1503	0.71	+1.0
1,726,618	+		Echvi_1503	0.71	-0.2
1,726,618	+		Echvi_1503	0.71	+0.1
1,726,618	+		Echvi_1503	0.71	-0.4
1,726,619	-		Echvi_1503	0.72	-0.2
1,726,619	-		Echvi_1503	0.72	+0.5