Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1495

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
1,714,762	+		Echvi_1494	0.67	+1.0
1,714,763	-		Echvi_1494	0.67	-1.0
1,714,763	-		Echvi_1494	0.67	+0.4
1,714,792	+		Echvi_1494	0.68	+1.6
1,714,793	-		Echvi_1494	0.68	-0.3
1,714,800	-		Echvi_1494	0.69	-1.9
1,714,800	-		Echvi_1494	0.69	-2.3
1,714,872	-		Echvi_1494	0.72	-0.3
1,714,907	+		Echvi_1494	0.73	+1.2
1,714,908	-		Echvi_1494	0.73	-1.0
1,714,908	-		Echvi_1494	0.73	+2.2
1,714,914	-		Echvi_1494	0.74	-0.3
1,714,914	-		Echvi_1494	0.74	+1.5
1,714,934	+		Echvi_1494	0.74	+0.7
1,714,941	-		Echvi_1494	0.75	+0.2
1,714,983	+		Echvi_1494	0.77	+0.1
1,714,984	-		Echvi_1494	0.77	-0.2
1,715,002	-		Echvi_1494	0.77	-0.3
1,715,026	-		Echvi_1494	0.78	+1.4
1,715,062	-		Echvi_1494	0.80	-0.8
1,715,101	+		Echvi_1494	0.82	+1.0
1,715,102	-		Echvi_1494	0.82	-1.5
1,715,115	+		Echvi_1494	0.82	+0.5
1,715,116	-		Echvi_1494	0.82	+0.5
1,715,117	+		Echvi_1494	0.82	-1.4
1,715,123	-		Echvi_1494	0.83	-0.3
1,715,123	-		Echvi_1494	0.83	+0.6
1,715,172	+		Echvi_1494	0.85	-1.8
1,715,172	+		Echvi_1494	0.85	+1.0
1,715,172	+		Echvi_1494	0.85	+0.1
1,715,173	-		Echvi_1494	0.85	-0.1
1,715,179	+		Echvi_1494	0.85	-0.6
1,715,179	+		Echvi_1494	0.85	-1.6
1,715,190	+		Echvi_1494	0.85	+0.8
1,715,190	+		Echvi_1494	0.85	+1.6
1,715,190	+		Echvi_1494	0.85	-0.6
1,715,190	+		Echvi_1494	0.85	-1.2
1,715,191	-		Echvi_1494	0.85	-0.3
1,715,243	-		Echvi_1494	0.88	-0.3
1,715,248	+		Echvi_1494	0.88	+0.0
1,715,248	+		Echvi_1494	0.88	+0.0
1,715,248	+		Echvi_1494	0.88	+1.4
1,715,248	+		Echvi_1494	0.88	-1.1
1,715,248	+		Echvi_1494	0.88	+0.5
1,715,248	+		Echvi_1494	0.88	+0.2
1,715,249	-		Echvi_1494	0.88	+0.9
1,715,249	-		Echvi_1494	0.88	-0.9
1,715,249	-		Echvi_1494	0.88	+0.2
1,715,252	+		Echvi_1494	0.88	-0.2
1,715,253	-		Echvi_1494	0.88	+1.0
1,715,277	+		Echvi_1494	0.89	-0.3
1,715,281	-		Echvi_1494	0.89	-1.0
1,715,282	+		Echvi_1494	0.89	-0.6
1,715,282	+		Echvi_1494	0.89	-0.8
1,715,282	+		Echvi_1494	0.89	-0.9
1,715,283	-		Echvi_1494	0.89	-0.0
1,715,283	-		Echvi_1494	0.89	-0.4
1,715,283	-		Echvi_1494	0.89	-3.1
1,715,333	-				+0.8
1,715,333	-				-1.9
1,715,345	+				-0.8
1,715,345	+				+0.3
1,715,346	-				+1.0
1,715,346	-				-0.6
1,715,346	-				-0.1
1,715,367	-				+0.7
1,715,397	+				+0.3
1,715,398	-				-2.4
1,715,400	-				+1.0
1,715,518	-				+3.6
1,715,518	-				-0.1
1,715,529	+				-1.2
1,715,561	+				-0.0
1,715,563	+				+0.8
1,715,564	-				-1.4
1,715,568	+				-0.5
1,715,568	+				+0.1
1,715,569	-				-1.3
1,715,585	+				-0.5
1,715,590	-				-2.2
1,715,593	+				-1.4
1,715,594	-				-0.0
1,715,608	+				+0.5
1,715,610	+				-1.4
1,715,610	+				-0.7
1,715,610	+				+2.0
1,715,610	+				+0.7
1,715,610	+				+0.4
1,715,610	+				-0.7
1,715,610	+				-0.3
1,715,610	+				-0.2
1,715,611	-				-0.3
1,715,611	-				+0.5
1,715,611	-				-0.8
1,715,611	-				-1.3
1,715,681	+		Echvi_1495	0.14	-0.9
1,715,733	+		Echvi_1495	0.23	-0.5
1,715,742	-		Echvi_1495	0.24	+0.5
1,715,742	-		Echvi_1495	0.24	-0.3
1,715,820	+		Echvi_1495	0.38	-2.2
1,715,821	-		Echvi_1495	0.38	+0.1
1,715,825	-		Echvi_1495	0.38	+0.3
1,716,036	-		Echvi_1495	0.75	-0.7
1,716,036	-		Echvi_1495	0.75	-0.6
1,716,036	-		Echvi_1495	0.75	-1.3
1,716,083	-		Echvi_1495	0.83	+0.4
1,716,094	-		Echvi_1495	0.85	+0.1
1,716,094	-		Echvi_1495	0.85	+0.2
1,716,109	-		Echvi_1495	0.87	-1.0
1,716,147	+				+1.1
1,716,147	+				-0.7
1,716,184	+				-1.3
1,716,185	-				-0.9
1,716,193	-				+0.5
1,716,193	-				-0.3
1,716,292	+				+0.7
1,716,331	-				-1.6
1,716,376	+				-1.7
1,716,376	+				+0.5
1,716,377	-				-0.1
1,716,378	+				-0.7
1,716,378	+				-0.0
1,716,380	+				-0.4
1,716,380	+				+1.3
1,716,380	+				+1.7
1,716,389	+				-0.8
1,716,389	+				-1.3
1,716,395	+				-1.3
1,716,424	+		Echvi_1496	0.12	-0.0
1,716,424	+		Echvi_1496	0.12	+1.7
1,716,424	+		Echvi_1496	0.12	+1.2
1,716,426	+		Echvi_1496	0.13	-0.6
1,716,427	-		Echvi_1496	0.13	-1.0
1,716,448	+		Echvi_1496	0.17	+0.1
1,716,448	+		Echvi_1496	0.17	+0.1
1,716,450	+		Echvi_1496	0.18	-0.7
1,716,451	-		Echvi_1496	0.18	+0.3
1,716,509	+		Echvi_1496	0.30	-0.9
1,716,606	+		Echvi_1496	0.49	+1.1
1,716,607	-		Echvi_1496	0.50	-0.8
1,716,646	+		Echvi_1496	0.58	+1.6
1,716,646	+		Echvi_1496	0.58	-0.5
1,716,685	+		Echvi_1496	0.66	-1.2
1,716,686	-		Echvi_1496	0.66	-1.8
1,716,729	-		Echvi_1496	0.75	+0.1
1,716,740	+		Echvi_1496	0.77	+0.2
1,716,771	+		Echvi_1496	0.83	-0.7
1,716,771	+		Echvi_1496	0.83	+0.5
1,716,771	+		Echvi_1496	0.83	-0.4
1,716,785	-		Echvi_1496	0.86	-0.1
1,716,815	+				-0.7
1,716,815	+				-0.6
1,716,862	-				-2.5
1,716,927	+				-0.3
1,716,966	-				+2.0
1,717,159	-		Echvi_1497	0.21	-0.7