Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1437

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
1,648,401	-				-1.0
1,648,515	-		Echvi_1435	0.14	-0.7
1,648,541	-		Echvi_1435	0.18	-1.6
1,648,541	-		Echvi_1435	0.18	-1.9
1,648,579	-		Echvi_1435	0.24	+0.8
1,648,594	-		Echvi_1435	0.27	-0.3
1,648,751	-		Echvi_1435	0.53	-1.2
1,648,795	+		Echvi_1435	0.60	-0.7
1,648,808	+		Echvi_1435	0.62	-1.0
1,648,878	-		Echvi_1435	0.73	-0.3
1,648,881	+		Echvi_1435	0.74	+0.4
1,648,881	+		Echvi_1435	0.74	-0.0
1,648,881	+		Echvi_1435	0.74	-0.3
1,648,881	+		Echvi_1435	0.74	+0.8
1,648,883	+		Echvi_1435	0.74	+2.8
1,648,884	-		Echvi_1435	0.74	+0.3
1,648,884	-		Echvi_1435	0.74	-0.4
1,648,927	+		Echvi_1435	0.81	+0.3
1,648,927	+		Echvi_1435	0.81	+0.5
1,648,928	-		Echvi_1435	0.82	+1.1
1,648,928	-		Echvi_1435	0.82	-1.8
1,648,949	+		Echvi_1435	0.85	-1.6
1,648,997	+				-1.5
1,648,997	+				+0.8
1,649,005	-				+0.2
1,649,030	+				+0.4
1,649,031	-				-3.3
1,649,050	-				+0.4
1,649,059	+				-1.9
1,649,060	-				+2.6
1,649,060	-				-0.9
1,649,060	-				+0.8
1,649,062	+				-0.6
1,649,094	+				+0.4
1,649,204	-		Echvi_1436	0.47	+0.1
1,649,204	-		Echvi_1436	0.47	+0.3
1,649,207	+		Echvi_1436	0.48	-0.5
1,649,207	+		Echvi_1436	0.48	-0.1
1,649,208	-		Echvi_1436	0.48	-0.8
1,649,209	+		Echvi_1436	0.49	-1.6
1,649,210	-		Echvi_1436	0.49	+0.7
1,649,255	+		Echvi_1436	0.69	-1.3
1,649,256	-		Echvi_1436	0.69	+0.1
1,649,256	-		Echvi_1436	0.69	-0.2
1,649,297	-		Echvi_1436	0.87	-2.8
1,649,297	-		Echvi_1436	0.87	+1.0
1,649,297	-		Echvi_1436	0.87	+0.4
1,649,297	-		Echvi_1436	0.87	-0.3
1,649,297	-		Echvi_1436	0.87	+0.1
1,649,297	-		Echvi_1436	0.87	-0.4
1,649,300	-		Echvi_1436	0.88	+1.2
1,649,300	-		Echvi_1436	0.88	+0.8
1,649,398	+				-1.7
1,649,615	-		Echvi_1437	0.17	-0.3
1,649,620	+		Echvi_1437	0.18	+0.7
1,649,651	+		Echvi_1437	0.20	-1.4
1,649,652	-		Echvi_1437	0.20	-0.3
1,649,656	+		Echvi_1437	0.20	-0.1
1,649,662	+		Echvi_1437	0.21	+0.9
1,649,662	+		Echvi_1437	0.21	-0.5
1,649,662	+		Echvi_1437	0.21	-0.7
1,649,687	+		Echvi_1437	0.23	+0.1
1,649,688	-		Echvi_1437	0.23	-0.2
1,649,688	-		Echvi_1437	0.23	+0.4
1,649,729	-		Echvi_1437	0.26	-0.7
1,649,736	-		Echvi_1437	0.26	-1.3
1,649,744	-		Echvi_1437	0.27	-0.1
1,649,745	+		Echvi_1437	0.27	+0.7
1,649,745	+		Echvi_1437	0.27	-0.3
1,649,746	-		Echvi_1437	0.27	-1.7
1,649,746	-		Echvi_1437	0.27	-0.8
1,649,746	-		Echvi_1437	0.27	-0.0
1,649,746	-		Echvi_1437	0.27	-1.0
1,649,802	+		Echvi_1437	0.31	-2.3
1,649,868	+		Echvi_1437	0.36	-0.8
1,649,926	-		Echvi_1437	0.40	+0.6
1,650,075	-		Echvi_1437	0.51	+1.6
1,650,102	+		Echvi_1437	0.53	-1.1
1,650,263	+		Echvi_1437	0.65	-0.6
1,650,281	-		Echvi_1437	0.67	-0.0
1,650,308	-		Echvi_1437	0.69	-2.1
1,650,354	-		Echvi_1437	0.72	-0.3
1,650,424	+		Echvi_1437	0.77	-1.0
1,650,424	+		Echvi_1437	0.77	+0.4
1,650,424	+		Echvi_1437	0.77	-0.2
1,650,425	-		Echvi_1437	0.77	-0.6
1,650,425	-		Echvi_1437	0.77	+1.0
1,650,425	-		Echvi_1437	0.77	+1.3
1,650,428	+		Echvi_1437	0.78	-0.7
1,650,428	+		Echvi_1437	0.78	+0.4
1,650,428	+		Echvi_1437	0.78	-1.2
1,650,429	-		Echvi_1437	0.78	+1.1
1,650,429	-		Echvi_1437	0.78	+1.3
1,650,429	-		Echvi_1437	0.78	-0.3
1,650,429	-		Echvi_1437	0.78	-0.8
1,650,473	-		Echvi_1437	0.81	-1.4
1,650,473	-		Echvi_1437	0.81	-0.8
1,650,515	-		Echvi_1437	0.84	-1.2
1,650,515	-		Echvi_1437	0.84	+1.3
1,650,552	-		Echvi_1437	0.87	-0.8
1,650,592	+		Echvi_1437	0.90	-1.0
1,650,670	+				-1.8
1,650,670	+				+0.9
1,650,671	-				-0.3
1,650,685	-				+0.0
1,650,694	+				+1.3
1,650,724	-				-0.0
1,650,737	-				+1.0
1,650,834	+				+1.6
1,650,834	+				-1.0
1,650,857	+				+0.6
1,650,858	-				+0.6
1,650,858	-				-0.2
1,650,878	+				+1.7
1,650,920	+				-0.4
1,650,920	+				-1.0
1,650,921	-				+0.0
1,650,921	-				+0.4
1,650,921	-				-0.4
1,650,921	-				+1.0
1,650,921	-				+0.9
1,650,921	-				+0.2
1,650,921	-				-1.3
1,650,923	-				+0.1
1,651,035	+				-0.6
1,651,111	+		Echvi_1438	0.11	-0.9
1,651,275	-		Echvi_1438	0.40	+0.5
1,651,275	-		Echvi_1438	0.40	+0.6
1,651,300	-		Echvi_1438	0.45	-1.1
1,651,341	+		Echvi_1438	0.52	-2.0
1,651,342	-		Echvi_1438	0.52	+0.6
1,651,342	-		Echvi_1438	0.52	-0.1
1,651,342	-		Echvi_1438	0.52	-0.3
1,651,399	+		Echvi_1438	0.63	-2.5
1,651,399	+		Echvi_1438	0.63	+3.2
1,651,400	-		Echvi_1438	0.63	-0.2
1,651,422	+		Echvi_1438	0.67	-2.6
1,651,423	-		Echvi_1438	0.67	+1.9
1,651,441	+		Echvi_1438	0.70	-2.6
1,651,465	-		Echvi_1438	0.75	-0.5
1,651,502	+		Echvi_1438	0.81	-0.1
1,651,503	-		Echvi_1438	0.82	-0.0
1,651,503	-		Echvi_1438	0.82	-0.1
1,651,503	-		Echvi_1438	0.82	+0.0
1,651,607	+				-1.5
1,651,608	-				-1.5
1,651,660	-				-0.4