Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1417

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
1,631,262	+				+1.0
1,631,262	+				-0.1
1,631,263	-				+0.7
1,631,282	+				-1.0
1,631,288	-				-1.2
1,631,295	-				+0.8
1,631,308	-				+0.3
1,631,308	-				+0.8
1,631,312	-				+0.6
1,631,394	-		Echvi_1416	0.17	+1.6
1,631,417	+		Echvi_1416	0.22	+0.0
1,631,417	+		Echvi_1416	0.22	+1.6
1,631,417	+		Echvi_1416	0.22	+0.5
1,631,417	+		Echvi_1416	0.22	+0.6
1,631,417	+		Echvi_1416	0.22	-0.2
1,631,418	-		Echvi_1416	0.22	+1.3
1,631,418	-		Echvi_1416	0.22	+0.3
1,631,418	-		Echvi_1416	0.22	+0.5
1,631,418	-		Echvi_1416	0.22	+0.7
1,631,438	+		Echvi_1416	0.27	+0.3
1,631,443	-		Echvi_1416	0.28	-1.6
1,631,458	+		Echvi_1416	0.31	-0.4
1,631,496	-		Echvi_1416	0.39	+0.2
1,631,508	+		Echvi_1416	0.41	+1.2
1,631,509	-		Echvi_1416	0.42	-0.0
1,631,511	+		Echvi_1416	0.42	+1.4
1,631,512	-		Echvi_1416	0.42	+0.5
1,631,596	+		Echvi_1416	0.60	-2.2
1,631,810	-				+0.9
1,631,810	-				-2.0
1,631,826	+				+0.4
1,631,951	+				-1.3
1,631,951	+				-0.8
1,631,953	+				+1.4
1,631,953	+				+0.0
1,631,953	+				-0.0
1,631,953	+				-1.8
1,631,953	+				+0.5
1,631,954	-				-0.8
1,631,954	-				-0.6
1,631,954	-				+0.2
1,631,954	-				+0.2
1,631,954	-				-0.1
1,631,954	-				+0.6
1,632,055	+				-1.0
1,632,055	+				+0.2
1,632,061	+				+0.6
1,632,062	-				+0.4
1,632,062	-				-0.3
1,632,065	-				+0.4
1,632,066	+				+0.6
1,632,066	+				-2.5
1,632,067	-				-0.5
1,632,067	-				+0.6
1,632,096	-				+1.2
1,632,215	+				-2.2
1,632,215	+				-0.3
1,632,215	+				+0.7
1,632,216	-				-2.3
1,632,216	-				-0.0
1,632,229	+				-0.5
1,632,262	+				+0.3
1,632,318	+				-0.4
1,632,364	+				-2.3
1,632,384	-				+0.1
1,632,427	-		Echvi_1417	0.13	-0.3
1,632,427	-		Echvi_1417	0.13	-1.3
1,632,429	+		Echvi_1417	0.13	-0.3
1,632,441	+		Echvi_1417	0.14	-0.5
1,632,508	+		Echvi_1417	0.19	+1.2
1,632,523	-		Echvi_1417	0.20	-0.8
1,632,523	-		Echvi_1417	0.20	+0.4
1,632,525	+		Echvi_1417	0.20	+0.2
1,632,526	-		Echvi_1417	0.20	-0.4
1,632,636	-		Echvi_1417	0.28	+1.3
1,632,636	-		Echvi_1417	0.28	-1.0
1,632,659	+		Echvi_1417	0.30	-0.7
1,632,660	-		Echvi_1417	0.30	-0.2
1,632,715	-		Echvi_1417	0.34	-0.1
1,632,717	+		Echvi_1417	0.34	-0.0
1,632,727	+		Echvi_1417	0.34	+0.6
1,632,752	-		Echvi_1417	0.36	+0.4
1,632,762	+		Echvi_1417	0.37	-0.2
1,632,762	+		Echvi_1417	0.37	+0.1
1,632,762	+		Echvi_1417	0.37	+0.6
1,632,762	+		Echvi_1417	0.37	+1.7
1,632,762	+		Echvi_1417	0.37	+0.2
1,632,762	+		Echvi_1417	0.37	-0.7
1,632,762	+		Echvi_1417	0.37	+0.1
1,632,762	+		Echvi_1417	0.37	-0.4
1,632,762	+		Echvi_1417	0.37	+1.0
1,632,762	+		Echvi_1417	0.37	+0.3
1,632,762	+		Echvi_1417	0.37	-0.3
1,632,762	+		Echvi_1417	0.37	+0.7
1,632,763	-		Echvi_1417	0.37	+1.0
1,632,763	-		Echvi_1417	0.37	-1.1
1,632,763	-		Echvi_1417	0.37	-0.3
1,632,763	-		Echvi_1417	0.37	-0.3
1,632,763	-		Echvi_1417	0.37	+0.1
1,632,763	-		Echvi_1417	0.37	-2.1
1,632,826	+		Echvi_1417	0.41	-0.5
1,632,831	+		Echvi_1417	0.42	-1.0
1,632,831	+		Echvi_1417	0.42	-1.2
1,632,831	+		Echvi_1417	0.42	-0.3
1,632,831	+		Echvi_1417	0.42	-1.3
1,632,831	+		Echvi_1417	0.42	-0.8
1,632,832	-		Echvi_1417	0.42	-0.1
1,632,832	-		Echvi_1417	0.42	-1.3
1,632,832	-		Echvi_1417	0.42	+0.6
1,632,835	+		Echvi_1417	0.42	-1.8
1,632,892	-		Echvi_1417	0.46	-1.3
1,632,935	+		Echvi_1417	0.49	+1.1
1,632,985	+		Echvi_1417	0.53	+0.5
1,632,986	-		Echvi_1417	0.53	-1.8
1,633,024	+		Echvi_1417	0.56	-1.0
1,633,024	+		Echvi_1417	0.56	-0.0
1,633,027	-		Echvi_1417	0.56	-0.8
1,633,049	+		Echvi_1417	0.57	-0.2
1,633,124	+		Echvi_1417	0.63	-0.3
1,633,125	-		Echvi_1417	0.63	+1.1
1,633,128	+		Echvi_1417	0.63	+1.7
1,633,129	-		Echvi_1417	0.63	-0.5
1,633,129	-		Echvi_1417	0.63	-1.3
1,633,129	-		Echvi_1417	0.63	+0.1
1,633,129	-		Echvi_1417	0.63	-0.8
1,633,129	-		Echvi_1417	0.63	-2.7
1,633,129	-		Echvi_1417	0.63	-0.0
1,633,129	-		Echvi_1417	0.63	-0.3
1,633,130	+		Echvi_1417	0.63	-0.6
1,633,130	+		Echvi_1417	0.63	+0.2
1,633,130	+		Echvi_1417	0.63	-1.5
1,633,130	+		Echvi_1417	0.63	-1.8
1,633,130	+		Echvi_1417	0.63	+1.3
1,633,130	+		Echvi_1417	0.63	+0.2
1,633,130	+		Echvi_1417	0.63	-1.8
1,633,130	+		Echvi_1417	0.63	-1.1
1,633,130	+		Echvi_1417	0.63	-1.0
1,633,130	+		Echvi_1417	0.63	+1.8
1,633,130	+		Echvi_1417	0.63	-0.7
1,633,130	+		Echvi_1417	0.63	-0.7
1,633,130	+		Echvi_1417	0.63	+0.7
1,633,130	+		Echvi_1417	0.63	+0.3
1,633,131	-		Echvi_1417	0.63	+0.7
1,633,131	-		Echvi_1417	0.63	+1.1
1,633,131	-		Echvi_1417	0.63	-1.4
1,633,131	-		Echvi_1417	0.63	-0.4
1,633,131	-		Echvi_1417	0.63	+0.0
1,633,134	+		Echvi_1417	0.63	-1.5
1,633,137	+		Echvi_1417	0.64	-1.7
1,633,138	-		Echvi_1417	0.64	-1.6
1,633,138	-		Echvi_1417	0.64	+0.8
1,633,140	+		Echvi_1417	0.64	-1.8
1,633,140	+		Echvi_1417	0.64	-0.3
1,633,140	+		Echvi_1417	0.64	+0.7
1,633,140	+		Echvi_1417	0.64	+0.1
1,633,140	+		Echvi_1417	0.64	+1.0
1,633,141	-		Echvi_1417	0.64	+1.2
1,633,141	-		Echvi_1417	0.64	-0.6
1,633,197	-		Echvi_1417	0.68	+0.4
1,633,197	-		Echvi_1417	0.68	+0.1
1,633,245	-		Echvi_1417	0.71	-0.2
1,633,294	+		Echvi_1417	0.75	+1.0
1,633,294	+		Echvi_1417	0.75	+0.0
1,633,295	-		Echvi_1417	0.75	+0.5
1,633,295	-		Echvi_1417	0.75	-0.2
1,633,296	+		Echvi_1417	0.75	-1.6
1,633,296	+		Echvi_1417	0.75	-1.2
1,633,305	+		Echvi_1417	0.76	-0.6
1,633,328	+		Echvi_1417	0.77	-0.3
1,633,328	+		Echvi_1417	0.77	+0.2
1,633,333	+		Echvi_1417	0.78	-0.8
1,633,338	+		Echvi_1417	0.78	+0.4
1,633,338	+		Echvi_1417	0.78	-0.9
1,633,338	+		Echvi_1417	0.78	+0.3
1,633,341	+		Echvi_1417	0.78	+0.4
1,633,347	+		Echvi_1417	0.79	-0.5
1,633,402	-		Echvi_1417	0.83	-0.4
1,633,402	-		Echvi_1417	0.83	-0.7
1,633,468	+		Echvi_1417	0.87	+0.6
1,633,469	-		Echvi_1417	0.87	-0.0
1,633,513	-				-0.7
1,633,534	+				-0.5
1,633,534	+				+1.8
1,633,602	-				-0.5
1,633,625	+				-0.8
1,633,626	-				+0.8
1,633,629	+				+0.2
1,633,630	-				+1.2
1,633,857	-		Echvi_1419	0.11	-1.3
1,633,916	+		Echvi_1419	0.27	-0.7
1,633,925	+		Echvi_1419	0.29	-0.5
1,633,925	+		Echvi_1419	0.29	-1.0
1,633,925	+		Echvi_1419	0.29	-0.9
1,633,926	-		Echvi_1419	0.29	+0.3
1,633,926	-		Echvi_1419	0.29	+1.5
1,633,987	-		Echvi_1419	0.46	-0.3
1,634,006	+		Echvi_1419	0.51	-0.2
1,634,088	-		Echvi_1419	0.72	-0.5
1,634,116	-		Echvi_1419	0.80	-0.4
1,634,187	+				-1.3
1,634,187	+				+2.2
1,634,188	-				-0.1
1,634,188	-				-1.4
1,634,196	+				+1.2
1,634,279	+		Echvi_1420	0.19	-0.3
1,634,279	+		Echvi_1420	0.19	-0.3
1,634,279	+		Echvi_1420	0.19	-1.2
1,634,280	-		Echvi_1420	0.19	+1.1
1,634,280	-		Echvi_1420	0.19	+0.6
1,634,280	-		Echvi_1420	0.19	-1.7
1,634,280	-		Echvi_1420	0.19	-2.6
1,634,280	-		Echvi_1420	0.19	-1.7
1,634,394	+		Echvi_1420	0.51	+0.1
1,634,394	+		Echvi_1420	0.51	+1.1
1,634,395	-		Echvi_1420	0.52	-0.7
1,634,399	-		Echvi_1420	0.53	-2.1
1,634,502	-		Echvi_1420	0.82	-1.6
1,634,506	+		Echvi_1420	0.83	+0.4
1,634,507	-		Echvi_1420	0.83	+1.2
1,634,543	-				-0.5
1,634,594	-				-0.5
1,634,606	+				-1.8
1,634,614	+				-1.0
1,634,615	-				+0.7
1,634,619	+				+2.2
1,634,620	-				-0.2