Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1416

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
1,630,329	+		Echvi_1414	0.79	+0.2
1,630,329	+		Echvi_1414	0.79	+1.1
1,630,330	-		Echvi_1414	0.79	+0.5
1,630,330	-		Echvi_1414	0.79	+1.4
1,630,330	-		Echvi_1414	0.79	-0.8
1,630,354	-		Echvi_1414	0.82	-0.3
1,630,445	-				-1.5
1,630,463	+				-0.8
1,630,463	+				+0.1
1,630,464	-				-0.4
1,630,464	-				-0.3
1,630,495	+				-1.3
1,630,495	+				+1.2
1,630,496	-				+1.0
1,630,496	-				-0.9
1,630,499	+				-0.5
1,630,499	+				+0.0
1,630,499	+				-2.8
1,630,499	+				+0.2
1,630,500	-				-1.2
1,630,500	-				-0.2
1,630,500	-				-0.1
1,630,504	-				-0.3
1,630,529	+				+1.2
1,630,542	+				-0.7
1,630,543	-				+1.6
1,630,554	+				+0.2
1,630,555	-				+1.6
1,630,555	-				-0.9
1,630,608	+		Echvi_1415	0.11	-0.0
1,630,622	+		Echvi_1415	0.13	-0.9
1,630,731	+		Echvi_1415	0.30	-0.9
1,630,732	-		Echvi_1415	0.30	+1.2
1,630,750	-		Echvi_1415	0.33	+1.4
1,630,750	-		Echvi_1415	0.33	+0.5
1,630,765	+		Echvi_1415	0.35	+0.1
1,630,790	+		Echvi_1415	0.39	-0.1
1,630,914	+		Echvi_1415	0.58	-1.0
1,630,916	+		Echvi_1415	0.59	+0.3
1,630,918	+		Echvi_1415	0.59	+0.3
1,630,918	+		Echvi_1415	0.59	-0.1
1,630,919	-		Echvi_1415	0.59	-0.8
1,630,919	-		Echvi_1415	0.59	-2.2
1,630,922	+		Echvi_1415	0.60	+0.7
1,630,922	+		Echvi_1415	0.60	+0.2
1,630,922	+		Echvi_1415	0.60	-0.2
1,630,922	+		Echvi_1415	0.60	-1.7
1,630,922	+		Echvi_1415	0.60	+0.7
1,630,923	-		Echvi_1415	0.60	+0.6
1,630,923	-		Echvi_1415	0.60	+0.1
1,630,965	+		Echvi_1415	0.66	-0.3
1,630,966	-		Echvi_1415	0.67	-0.5
1,630,968	+		Echvi_1415	0.67	+0.7
1,630,969	-		Echvi_1415	0.67	-0.1
1,630,969	-		Echvi_1415	0.67	-0.4
1,630,977	+		Echvi_1415	0.68	-0.1
1,630,977	+		Echvi_1415	0.68	+0.0
1,631,032	+		Echvi_1415	0.77	+2.0
1,631,049	+		Echvi_1415	0.79	-0.1
1,631,049	+		Echvi_1415	0.79	+3.0
1,631,103	+		Echvi_1415	0.88	-0.0
1,631,124	-				+0.4
1,631,145	+				-0.8
1,631,148	+				+0.2
1,631,148	+				-0.2
1,631,148	+				+0.8
1,631,149	-				+0.3
1,631,235	+				+2.0
1,631,235	+				-0.8
1,631,236	-				-0.2
1,631,236	-				-0.7
1,631,262	+				+1.0
1,631,262	+				-0.1
1,631,263	-				+0.7
1,631,282	+				-1.0
1,631,288	-				-1.2
1,631,295	-				+0.8
1,631,308	-				+0.3
1,631,308	-				+0.8
1,631,312	-				+0.6
1,631,394	-		Echvi_1416	0.17	+1.6
1,631,417	+		Echvi_1416	0.22	+0.0
1,631,417	+		Echvi_1416	0.22	+1.6
1,631,417	+		Echvi_1416	0.22	+0.5
1,631,417	+		Echvi_1416	0.22	+0.6
1,631,417	+		Echvi_1416	0.22	-0.2
1,631,418	-		Echvi_1416	0.22	+1.3
1,631,418	-		Echvi_1416	0.22	+0.3
1,631,418	-		Echvi_1416	0.22	+0.5
1,631,418	-		Echvi_1416	0.22	+0.7
1,631,438	+		Echvi_1416	0.27	+0.3
1,631,443	-		Echvi_1416	0.28	-1.6
1,631,458	+		Echvi_1416	0.31	-0.4
1,631,496	-		Echvi_1416	0.39	+0.2
1,631,508	+		Echvi_1416	0.41	+1.2
1,631,509	-		Echvi_1416	0.42	-0.0
1,631,511	+		Echvi_1416	0.42	+1.4
1,631,512	-		Echvi_1416	0.42	+0.5
1,631,596	+		Echvi_1416	0.60	-2.2
1,631,810	-				+0.9
1,631,810	-				-2.0
1,631,826	+				+0.4
1,631,951	+				-1.3
1,631,951	+				-0.8
1,631,953	+				+1.4
1,631,953	+				+0.0
1,631,953	+				-0.0
1,631,953	+				-1.8
1,631,953	+				+0.5
1,631,954	-				-0.8
1,631,954	-				-0.6
1,631,954	-				+0.2
1,631,954	-				+0.2
1,631,954	-				-0.1
1,631,954	-				+0.6
1,632,055	+				-1.0
1,632,055	+				+0.2
1,632,061	+				+0.6
1,632,062	-				+0.4
1,632,062	-				-0.3
1,632,065	-				+0.4
1,632,066	+				+0.6
1,632,066	+				-2.5
1,632,067	-				-0.5
1,632,067	-				+0.6
1,632,096	-				+1.2
1,632,215	+				-2.2
1,632,215	+				-0.3
1,632,215	+				+0.7
1,632,216	-				-2.3
1,632,216	-				-0.0
1,632,229	+				-0.5
1,632,262	+				+0.3
1,632,318	+				-0.4
1,632,364	+				-2.3
1,632,384	-				+0.1
1,632,427	-		Echvi_1417	0.13	-0.3
1,632,427	-		Echvi_1417	0.13	-1.3
1,632,429	+		Echvi_1417	0.13	-0.3
1,632,441	+		Echvi_1417	0.14	-0.5
1,632,508	+		Echvi_1417	0.19	+1.2
1,632,523	-		Echvi_1417	0.20	-0.8
1,632,523	-		Echvi_1417	0.20	+0.4
1,632,525	+		Echvi_1417	0.20	+0.2
1,632,526	-		Echvi_1417	0.20	-0.4
1,632,636	-		Echvi_1417	0.28	+1.3
1,632,636	-		Echvi_1417	0.28	-1.0
1,632,659	+		Echvi_1417	0.30	-0.7
1,632,660	-		Echvi_1417	0.30	-0.2
1,632,715	-		Echvi_1417	0.34	-0.1
1,632,717	+		Echvi_1417	0.34	-0.0
1,632,727	+		Echvi_1417	0.34	+0.6
1,632,752	-		Echvi_1417	0.36	+0.4
1,632,762	+		Echvi_1417	0.37	-0.2
1,632,762	+		Echvi_1417	0.37	+0.1
1,632,762	+		Echvi_1417	0.37	+0.6
1,632,762	+		Echvi_1417	0.37	+1.7
1,632,762	+		Echvi_1417	0.37	+0.2
1,632,762	+		Echvi_1417	0.37	-0.7
1,632,762	+		Echvi_1417	0.37	+0.1
1,632,762	+		Echvi_1417	0.37	-0.4
1,632,762	+		Echvi_1417	0.37	+1.0
1,632,762	+		Echvi_1417	0.37	+0.3
1,632,762	+		Echvi_1417	0.37	-0.3
1,632,762	+		Echvi_1417	0.37	+0.7
1,632,763	-		Echvi_1417	0.37	+1.0
1,632,763	-		Echvi_1417	0.37	-1.1
1,632,763	-		Echvi_1417	0.37	-0.3
1,632,763	-		Echvi_1417	0.37	-0.3
1,632,763	-		Echvi_1417	0.37	+0.1
1,632,763	-		Echvi_1417	0.37	-2.1