Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1310

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
1,507,699	-		Echvi_1309	0.71	+0.6
1,507,736	+		Echvi_1309	0.72	+0.1
1,507,736	+		Echvi_1309	0.72	-1.2
1,507,737	-		Echvi_1309	0.72	+0.9
1,507,737	-		Echvi_1309	0.72	-0.4
1,507,738	+		Echvi_1309	0.72	-1.4
1,507,738	+		Echvi_1309	0.72	-0.1
1,507,738	+		Echvi_1309	0.72	-0.6
1,507,739	-		Echvi_1309	0.72	+0.4
1,507,806	+		Echvi_1309	0.75	-2.9
1,507,807	-		Echvi_1309	0.75	-1.1
1,507,807	-		Echvi_1309	0.75	+2.0
1,507,815	-		Echvi_1309	0.75	+0.5
1,507,815	-		Echvi_1309	0.75	+0.1
1,507,815	-		Echvi_1309	0.75	+0.3
1,507,978	-		Echvi_1309	0.81	+0.5
1,507,978	-		Echvi_1309	0.81	-0.7
1,507,980	+		Echvi_1309	0.81	+0.3
1,507,991	+		Echvi_1309	0.81	-0.0
1,508,112	-		Echvi_1309	0.86	-0.1
1,508,112	-		Echvi_1309	0.86	-0.9
1,508,168	-		Echvi_1309	0.88	+0.3
1,508,203	+		Echvi_1309	0.89	+2.0
1,508,203	+		Echvi_1309	0.89	+1.5
1,508,204	-		Echvi_1309	0.89	+0.8
1,508,204	-		Echvi_1309	0.89	-0.0
1,508,204	-		Echvi_1309	0.89	-1.6
1,508,419	-				+0.5
1,508,419	-				+0.6
1,508,483	-				-1.5
1,508,518	-				+0.4
1,508,541	-				+0.9
1,508,545	-				-0.6
1,508,558	+				-1.8
1,508,558	+				-0.2
1,508,570	+				-0.5
1,508,590	+				-1.5
1,508,591	-				-0.9
1,508,591	-				+0.0
1,508,633	+				-0.1
1,508,636	-				+0.6
1,508,636	-				-0.1
1,508,636	-				+1.8
1,508,642	-				+0.2
1,508,642	-				+0.6
1,508,668	+				+0.1
1,508,668	+				-0.6
1,508,681	+				+0.0
1,508,689	-				-0.5
1,508,745	-				-1.0
1,508,777	+				-0.7
1,508,843	+				-0.2
1,508,843	+				-1.0
1,508,843	+				-1.1
1,508,843	+				+0.4
1,508,843	+				-1.1
1,508,843	+				-0.4
1,508,844	-				+0.5
1,508,844	-				+0.6
1,508,847	-				-0.0
1,508,910	+				-1.9
1,508,911	-				-0.0
1,508,921	-				-3.0
1,508,957	+		Echvi_1310	0.11	+0.4
1,508,978	+		Echvi_1310	0.12	-1.0
1,508,993	+		Echvi_1310	0.12	-1.4
1,509,018	+		Echvi_1310	0.13	-0.4
1,509,026	+		Echvi_1310	0.14	-1.0
1,509,026	+		Echvi_1310	0.14	-0.7
1,509,026	+		Echvi_1310	0.14	+1.3
1,509,026	+		Echvi_1310	0.14	-1.1
1,509,027	-		Echvi_1310	0.14	-0.6
1,509,027	-		Echvi_1310	0.14	+0.8
1,509,027	-		Echvi_1310	0.14	-2.0
1,509,027	-		Echvi_1310	0.14	-0.0
1,509,027	-		Echvi_1310	0.14	-2.0
1,509,027	-		Echvi_1310	0.14	-2.4
1,509,101	+		Echvi_1310	0.17	-0.2
1,509,101	+		Echvi_1310	0.17	-0.6
1,509,101	+		Echvi_1310	0.17	-0.3
1,509,102	-		Echvi_1310	0.17	-0.3
1,509,102	-		Echvi_1310	0.17	-0.4
1,509,102	-		Echvi_1310	0.17	+1.0
1,509,102	-		Echvi_1310	0.17	+0.7
1,509,116	-		Echvi_1310	0.17	+1.0
1,509,156	+				+1.4
1,509,158	+		Echvi_1310	0.19	+1.0
1,509,159	-		Echvi_1310	0.19	-2.6
1,509,159	-		Echvi_1310	0.19	-1.1
1,509,159	-		Echvi_1310	0.19	-0.4
1,509,198	+		Echvi_1310	0.21	-0.3
1,509,285	-		Echvi_1310	0.24	-1.2
1,509,302	+		Echvi_1310	0.25	-0.1
1,509,303	-		Echvi_1310	0.25	-3.1
1,509,321	-		Echvi_1310	0.26	+0.1
1,509,362	+		Echvi_1310	0.27	-0.9
1,509,434	+		Echvi_1310	0.30	-0.6
1,509,454	-		Echvi_1310	0.31	-1.4
1,509,575	+		Echvi_1310	0.36	-1.1
1,509,612	+		Echvi_1310	0.38	-0.6
1,509,613	-		Echvi_1310	0.38	-0.1
1,509,656	+		Echvi_1310	0.39	-0.6
1,509,794	+		Echvi_1310	0.45	-0.9
1,509,795	-		Echvi_1310	0.45	-1.3
1,509,842	+		Echvi_1310	0.47	-1.2
1,509,842	+		Echvi_1310	0.47	+0.0
1,509,865	+		Echvi_1310	0.48	-0.9
1,509,865	+		Echvi_1310	0.48	-0.8
1,509,866	-		Echvi_1310	0.48	-0.5
1,509,949	+		Echvi_1310	0.52	-0.3
1,510,002	+		Echvi_1310	0.54	-2.0
1,510,002	+		Echvi_1310	0.54	-0.4
1,510,003	-		Echvi_1310	0.54	-1.4
1,510,047	+		Echvi_1310	0.56	+0.8
1,510,047	+		Echvi_1310	0.56	+1.6
1,510,047	+		Echvi_1310	0.56	-0.7
1,510,048	-		Echvi_1310	0.56	-1.2
1,510,048	-		Echvi_1310	0.56	-1.0
1,510,049	+		Echvi_1310	0.56	+0.3
1,510,049	+		Echvi_1310	0.56	-1.5
1,510,190	-		Echvi_1310	0.61	-0.1
1,510,322	+		Echvi_1310	0.67	-1.6
1,510,323	-		Echvi_1310	0.67	+1.2
1,510,323	-		Echvi_1310	0.67	+1.1
1,510,383	+		Echvi_1310	0.69	-1.3
1,510,384	-		Echvi_1310	0.69	-0.5
1,510,427	+		Echvi_1310	0.71	-2.0
1,510,428	-		Echvi_1310	0.71	-1.7
1,510,436	-		Echvi_1310	0.72	-2.0
1,510,436	-		Echvi_1310	0.72	-1.5
1,510,436	-		Echvi_1310	0.72	-1.0
1,510,448	+		Echvi_1310	0.72	-0.2
1,510,510	+		Echvi_1310	0.75	-1.2
1,510,510	+		Echvi_1310	0.75	+1.4
1,510,510	+		Echvi_1310	0.75	-1.2
1,510,606	-		Echvi_1310	0.79	-2.4
1,510,674	+		Echvi_1310	0.81	-1.0
1,510,675	-		Echvi_1310	0.81	-1.4
1,510,675	-		Echvi_1310	0.81	-3.0
1,510,691	-		Echvi_1310	0.82	+1.0
1,510,724	+		Echvi_1310	0.83	-2.6
1,510,724	+		Echvi_1310	0.83	-0.0
1,510,724	+		Echvi_1310	0.83	+1.0
1,510,724	+		Echvi_1310	0.83	+0.2
1,510,725	-		Echvi_1310	0.83	-1.4
1,510,808	-		Echvi_1310	0.87	-0.4
1,510,830	+		Echvi_1310	0.88	-0.4
1,510,832	+		Echvi_1310	0.88	-2.0
1,510,879	-		Echvi_1310	0.90	-2.0
1,510,891	+				+0.4
1,510,907	-				-1.6
1,510,925	+				-0.3
1,510,988	-				+0.7
1,511,087	-				-1.3
1,511,096	+				+0.2
1,511,097	-				-1.5
1,511,127	+				-1.2
1,511,127	+				-3.0
1,511,128	-				-0.1
1,511,167	+				-1.4
1,511,177	-				+0.6
1,511,180	-				+0.1
1,511,180	-				-0.4
1,511,196	-				+0.4
1,511,196	-				+0.1
1,511,287	+				-1.9
1,511,287	+				+0.7
1,511,287	+				+0.4
1,511,287	+				+0.8
1,511,287	+				+0.1
1,511,287	+				-0.8
1,511,287	+				-1.5
1,511,288	-				-1.0
1,511,342	+				+3.2
1,511,372	+				+2.2
1,511,372	+				+1.8
1,511,373	-				+1.1
1,511,373	-				+1.7
1,511,394	+				+1.0
1,511,395	-				+0.6
1,511,395	-				+1.5
1,511,395	-				+0.5
1,511,408	+				+1.9
1,511,408	+				+2.2
1,511,408	+				+1.3
1,511,409	-		Echvi_1311	0.10	+0.8
1,511,409	-		Echvi_1311	0.10	+2.0
1,511,417	+		Echvi_1311	0.11	+1.4
1,511,418	-		Echvi_1311	0.11	+1.8
1,511,419	+		Echvi_1311	0.11	+1.5
1,511,419	+		Echvi_1311	0.11	+2.0
1,511,429	-		Echvi_1311	0.12	-0.1
1,511,432	+		Echvi_1311	0.12	+1.9
1,511,432	+		Echvi_1311	0.12	+1.7
1,511,433	-		Echvi_1311	0.12	+0.6
1,511,433	-		Echvi_1311	0.12	+1.4
1,511,433	-		Echvi_1311	0.12	+1.4
1,511,533	+		Echvi_1311	0.20	+1.5
1,511,535	+		Echvi_1311	0.20	+1.5
1,511,535	+		Echvi_1311	0.20	+5.3
1,511,535	+		Echvi_1311	0.20	+1.5
1,511,535	+		Echvi_1311	0.20	+2.6
1,511,535	+		Echvi_1311	0.20	+2.1
1,511,535	+		Echvi_1311	0.20	+1.6
1,511,535	+		Echvi_1311	0.20	+1.8
1,511,535	+		Echvi_1311	0.20	+1.2
1,511,536	-		Echvi_1311	0.20	+1.3
1,511,536	-		Echvi_1311	0.20	-0.4
1,511,536	-		Echvi_1311	0.20	+2.1
1,511,544	+		Echvi_1311	0.21	+2.2
1,511,575	+		Echvi_1311	0.23	+2.3
1,511,605	+		Echvi_1311	0.26	+1.3
1,511,605	+		Echvi_1311	0.26	+1.9
1,511,606	-		Echvi_1311	0.26	+1.8
1,511,662	+		Echvi_1311	0.31	+1.0
1,511,663	-		Echvi_1311	0.31	+1.0
1,511,682	-		Echvi_1311	0.32	+2.1
1,511,762	-		Echvi_1311	0.39	+1.7
1,511,765	+		Echvi_1311	0.39	+1.3
1,511,765	+		Echvi_1311	0.39	+1.8
1,511,765	+		Echvi_1311	0.39	+1.4
1,511,766	-		Echvi_1311	0.39	+1.4
1,511,766	-		Echvi_1311	0.39	+1.1
1,511,794	+		Echvi_1311	0.41	+2.1
1,511,794	+		Echvi_1311	0.41	+1.1
1,511,794	+		Echvi_1311	0.41	+1.0
1,511,794	+		Echvi_1311	0.41	+2.1
1,511,795	-		Echvi_1311	0.41	+1.4
1,511,795	-		Echvi_1311	0.41	+2.6
1,511,854	+		Echvi_1311	0.46	+1.3
1,511,855	-		Echvi_1311	0.46	+0.0
1,511,865	+		Echvi_1311	0.47	+2.1
1,511,865	+		Echvi_1311	0.47	+1.9
1,511,929	+		Echvi_1311	0.52	+1.5
1,511,940	+		Echvi_1311	0.53	+1.9
1,511,940	+		Echvi_1311	0.53	+1.4
1,511,940	+		Echvi_1311	0.53	+2.0
1,511,941	-		Echvi_1311	0.53	+1.8
1,511,941	-		Echvi_1311	0.53	+0.8
1,511,944	+		Echvi_1311	0.53	+1.6
1,511,945	-		Echvi_1311	0.54	+1.4
1,511,945	-		Echvi_1311	0.54	+3.4
1,511,945	-		Echvi_1311	0.54	+1.1
1,511,965	+		Echvi_1311	0.55	+1.7
1,511,966	-		Echvi_1311	0.55	+0.9
1,512,012	-		Echvi_1311	0.59	+3.0
1,512,012	-		Echvi_1311	0.59	+1.3
1,512,032	-		Echvi_1311	0.61	+0.1
1,512,034	+		Echvi_1311	0.61	+2.4
1,512,035	-		Echvi_1311	0.61	+0.9
1,512,035	-		Echvi_1311	0.61	+1.1
1,512,035	-		Echvi_1311	0.61	+1.6
1,512,038	+		Echvi_1311	0.61	+1.4
1,512,038	+		Echvi_1311	0.61	+1.5
1,512,038	+		Echvi_1311	0.61	+2.3
1,512,038	+		Echvi_1311	0.61	+2.0
1,512,038	+		Echvi_1311	0.61	+2.1
1,512,039	-		Echvi_1311	0.61	+1.2
1,512,039	-		Echvi_1311	0.61	+0.5
1,512,043	+		Echvi_1311	0.62	+1.9
1,512,043	+		Echvi_1311	0.62	+2.0
1,512,043	+		Echvi_1311	0.62	+1.7
1,512,044	-		Echvi_1311	0.62	+1.2
1,512,055	+		Echvi_1311	0.63	+2.3
1,512,056	-		Echvi_1311	0.63	+1.3
1,512,056	-		Echvi_1311	0.63	+1.4
1,512,103	-		Echvi_1311	0.66	+1.2