Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1307

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
1,502,378	+		Echvi_1306	0.55	-2.8
1,502,379	-		Echvi_1306	0.55	-1.0
1,502,429	-		Echvi_1306	0.58	+0.4
1,502,431	+		Echvi_1306	0.58	-1.1
1,502,432	-		Echvi_1306	0.58	-0.4
1,502,495	+		Echvi_1306	0.62	-0.1
1,502,503	+		Echvi_1306	0.62	+0.3
1,502,503	+		Echvi_1306	0.62	-0.9
1,502,504	-		Echvi_1306	0.63	-1.3
1,502,505	+		Echvi_1306	0.63	-1.0
1,502,505	+		Echvi_1306	0.63	-0.5
1,502,505	+		Echvi_1306	0.63	+1.8
1,502,505	+		Echvi_1306	0.63	+0.4
1,502,505	+		Echvi_1306	0.63	-1.0
1,502,505	+		Echvi_1306	0.63	+0.5
1,502,506	-		Echvi_1306	0.63	-0.9
1,502,506	-		Echvi_1306	0.63	-2.4
1,502,506	-		Echvi_1306	0.63	-1.7
1,502,506	-		Echvi_1306	0.63	+0.1
1,502,506	-		Echvi_1306	0.63	-0.3
1,502,506	-		Echvi_1306	0.63	-0.3
1,502,510	+		Echvi_1306	0.63	+0.1
1,502,510	+		Echvi_1306	0.63	-1.3
1,502,686	-		Echvi_1306	0.74	-0.9
1,502,753	+		Echvi_1306	0.78	-0.9
1,502,782	+		Echvi_1306	0.80	-0.2
1,502,782	+		Echvi_1306	0.80	-0.6
1,502,782	+		Echvi_1306	0.80	-0.9
1,502,783	-		Echvi_1306	0.80	-1.1
1,502,811	+		Echvi_1306	0.82	+1.5
1,502,872	+		Echvi_1306	0.85	-2.6
1,502,873	-		Echvi_1306	0.86	-1.7
1,502,897	-		Echvi_1306	0.87	+1.5
1,502,897	-		Echvi_1306	0.87	+1.1
1,502,970	+				+1.4
1,502,970	+				+1.5
1,503,090	+				-0.0
1,503,108	-				+0.5
1,503,141	+				-0.4
1,503,200	-				+0.1
1,503,207	-				+0.9
1,503,266	-				-0.3
1,503,281	-				+0.1
1,503,293	+				+1.0
1,503,293	+				-0.4
1,503,294	-				-0.4
1,503,294	-				-1.5
1,503,315	+				+0.5
1,503,316	-				-0.0
1,503,355	-				-0.8
1,503,438	-				-0.4
1,503,464	-				+0.8
1,503,478	+				-0.6
1,503,521	+		Echvi_1307	0.12	-3.4
1,503,522	-		Echvi_1307	0.12	+0.4
1,503,523	+		Echvi_1307	0.13	-1.4
1,503,524	-		Echvi_1307	0.13	-0.2
1,503,527	+				+2.0
1,503,528	-		Echvi_1307	0.13	+0.4
1,503,528	-		Echvi_1307	0.13	-0.8
1,503,539	+		Echvi_1307	0.13	+0.4
1,503,540	-		Echvi_1307	0.14	-1.6
1,503,564	+		Echvi_1307	0.15	-0.4
1,503,564	+		Echvi_1307	0.15	+0.0
1,503,567	-		Echvi_1307	0.15	+1.9
1,503,567	-		Echvi_1307	0.15	+0.4
1,503,568	+		Echvi_1307	0.15	-0.0
1,503,569	-		Echvi_1307	0.15	-2.4
1,503,569	-		Echvi_1307	0.15	-2.3
1,503,614	+		Echvi_1307	0.18	-1.4
1,503,615	-		Echvi_1307	0.18	+1.3
1,503,671	-		Echvi_1307	0.22	-2.1
1,503,672	+		Echvi_1307	0.22	+0.1
1,503,672	+		Echvi_1307	0.22	-1.0
1,503,673	-		Echvi_1307	0.22	+0.7
1,503,774	+		Echvi_1307	0.28	-1.2
1,503,774	+		Echvi_1307	0.28	+0.1
1,503,775	-		Echvi_1307	0.28	-1.5
1,503,863	-		Echvi_1307	0.33	+0.4
1,503,875	+		Echvi_1307	0.34	+0.1
1,503,876	-		Echvi_1307	0.34	+0.4
1,503,876	-		Echvi_1307	0.34	-1.6
1,503,879	-		Echvi_1307	0.34	+0.1
1,503,939	-		Echvi_1307	0.38	-0.8
1,503,965	+		Echvi_1307	0.40	-2.7
1,503,967	+		Echvi_1307	0.40	-1.9
1,503,980	+		Echvi_1307	0.41	-0.7
1,503,980	+		Echvi_1307	0.41	+0.0
1,503,983	-		Echvi_1307	0.41	-0.4
1,504,105	+		Echvi_1307	0.48	-0.2
1,504,112	+		Echvi_1307	0.49	+0.8
1,504,117	+		Echvi_1307	0.49	+3.0
1,504,142	+		Echvi_1307	0.51	+0.8
1,504,142	+		Echvi_1307	0.51	-1.0
1,504,143	-		Echvi_1307	0.51	+0.4
1,504,147	+		Echvi_1307	0.51	-0.6
1,504,148	-		Echvi_1307	0.51	-1.4
1,504,148	-		Echvi_1307	0.51	-1.6
1,504,220	+		Echvi_1307	0.55	+1.1
1,504,221	-		Echvi_1307	0.56	-1.9
1,504,224	+		Echvi_1307	0.56	-0.8
1,504,224	+		Echvi_1307	0.56	-1.7
1,504,225	-		Echvi_1307	0.56	+1.0
1,504,225	-		Echvi_1307	0.56	+2.4
1,504,264	+		Echvi_1307	0.58	-1.7
1,504,268	+		Echvi_1307	0.58	-1.6
1,504,268	+		Echvi_1307	0.58	-2.2
1,504,268	+		Echvi_1307	0.58	-0.7
1,504,268	+		Echvi_1307	0.58	-0.6
1,504,269	-		Echvi_1307	0.58	-0.0
1,504,269	-		Echvi_1307	0.58	+0.6
1,504,269	-		Echvi_1307	0.58	+0.5
1,504,269	-		Echvi_1307	0.58	-2.0
1,504,269	-		Echvi_1307	0.58	-1.3
1,504,307	+		Echvi_1307	0.61	+1.0
1,504,322	+		Echvi_1307	0.62	-2.2
1,504,337	+		Echvi_1307	0.63	-0.1
1,504,381	+		Echvi_1307	0.65	+2.0
1,504,381	+		Echvi_1307	0.65	-0.5
1,504,381	+		Echvi_1307	0.65	-1.5
1,504,381	+		Echvi_1307	0.65	-0.7
1,504,382	-		Echvi_1307	0.65	+0.4
1,504,385	+		Echvi_1307	0.66	-0.8
1,504,385	+		Echvi_1307	0.66	-0.3
1,504,387	+		Echvi_1307	0.66	+0.5
1,504,400	-		Echvi_1307	0.67	+0.8
1,504,408	+		Echvi_1307	0.67	-0.4
1,504,408	+		Echvi_1307	0.67	+0.0
1,504,409	-		Echvi_1307	0.67	-0.9
1,504,469	+		Echvi_1307	0.71	-0.8
1,504,531	+		Echvi_1307	0.75	+3.2
1,504,531	+		Echvi_1307	0.75	-0.6
1,504,532	-		Echvi_1307	0.75	+2.0
1,504,532	-		Echvi_1307	0.75	-0.7
1,504,616	+		Echvi_1307	0.80	+1.6
1,504,617	-		Echvi_1307	0.80	-0.0
1,504,617	-		Echvi_1307	0.80	-0.6
1,504,617	-		Echvi_1307	0.80	-1.1
1,504,647	-		Echvi_1307	0.82	-1.6
1,504,648	+		Echvi_1307	0.82	-0.9
1,504,753	+		Echvi_1307	0.88	-0.0
1,504,773	-		Echvi_1307	0.90	+1.2
1,504,774	+		Echvi_1307	0.90	-1.2
1,504,774	+		Echvi_1307	0.90	-1.0
1,504,774	+		Echvi_1307	0.90	+1.0
1,504,779	-		Echvi_1307	0.90	+1.6
1,504,784	-				-0.5
1,504,805	+				+1.7
1,504,805	+				-0.2
1,504,882	-				+2.2
1,504,890	+				+0.5
1,504,890	+				+2.0
1,504,890	+				-1.7
1,504,890	+				-1.6
1,504,890	+				-0.7
1,504,890	+				+0.5
1,504,891	-				-0.0
1,504,891	-				+0.1
1,504,891	-				+0.2
1,504,891	-				-0.1
1,504,891	-				-0.4
1,504,891	-				+0.7
1,504,896	+				+0.1
1,505,005	+				+3.0
1,505,044	+				+0.6
1,505,060	+				+1.2
1,505,111	-		Echvi_1308	0.28	-0.2
1,505,121	-		Echvi_1308	0.35	-1.2
1,505,123	-		Echvi_1308	0.36	-1.3
1,505,194	+		Echvi_1308	0.81	-0.9
1,505,194	+		Echvi_1308	0.81	+1.1
1,505,194	+		Echvi_1308	0.81	-0.8
1,505,196	+		Echvi_1308	0.83	+0.4
1,505,196	+		Echvi_1308	0.83	+0.8
1,505,247	+				+0.2
1,505,247	+				-0.4
1,505,283	-				+1.0
1,505,283	-				-0.2
1,505,295	-				-0.6
1,505,363	+				+1.0
1,505,363	+				-0.7
1,505,497	+				+0.3
1,505,533	-				+0.3
1,505,600	-				+0.1
1,505,605	-				-0.9
1,505,691	+				-0.7
1,505,692	-				+0.6
1,505,692	-				+0.2
1,505,692	-				-2.6
1,505,733	+				+1.0
1,505,770	+				+0.6
1,505,776	+				-0.3
1,505,776	+				-0.3
1,505,776	+				+0.3
1,505,788	+				+0.5
1,505,814	+				+0.7
1,505,815	-				-0.5
1,505,815	-				-1.1
1,505,815	-				+2.0
1,505,815	-				-1.0
1,505,840	-				+2.0
1,505,843	+				-1.4
1,505,843	+				+0.4
1,505,844	-				-2.2
1,505,844	-				-0.2
1,505,896	+				+0.6
1,505,896	+				+1.3
1,505,896	+				-0.6
1,505,897	-				+1.0
1,505,897	-				-0.6
1,505,910	+				-2.4
1,505,942	-				-1.3