Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1306

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
1,500,518	-		Echvi_1304	0.78	+1.0
1,500,528	-		Echvi_1304	0.80	-1.1
1,500,528	-		Echvi_1304	0.80	+0.9
1,500,528	-		Echvi_1304	0.80	-0.8
1,500,528	-		Echvi_1304	0.80	-1.7
1,500,590	+				-1.6
1,500,591	-				+0.3
1,500,608	-				+1.1
1,500,608	-				+0.3
1,500,608	-				-1.0
1,500,615	+				-1.1
1,500,628	+				+1.8
1,500,629	-				+0.1
1,500,707	+		Echvi_1305	0.11	-2.2
1,500,715	-		Echvi_1305	0.12	-2.1
1,500,719	+		Echvi_1305	0.13	-0.6
1,500,720	-		Echvi_1305	0.13	+0.4
1,500,735	-		Echvi_1305	0.15	-1.6
1,500,764	+		Echvi_1305	0.20	-0.0
1,500,765	-		Echvi_1305	0.20	-1.9
1,500,807	+		Echvi_1305	0.27	-3.0
1,500,808	-		Echvi_1305	0.27	-3.0
1,500,808	-		Echvi_1305	0.27	+1.4
1,500,808	-		Echvi_1305	0.27	-2.6
1,500,890	+		Echvi_1305	0.41	-1.0
1,500,900	-		Echvi_1305	0.43	-2.4
1,500,900	-		Echvi_1305	0.43	-3.0
1,500,918	-		Echvi_1305	0.46	-0.2
1,500,918	-		Echvi_1305	0.46	-2.4
1,500,941	-		Echvi_1305	0.49	-3.0
1,500,986	+		Echvi_1305	0.57	-2.8
1,501,013	+		Echvi_1305	0.61	+1.0
1,501,014	-		Echvi_1305	0.62	-0.4
1,501,050	+		Echvi_1305	0.67	-1.6
1,501,102	+		Echvi_1305	0.76	-1.2
1,501,143	+		Echvi_1305	0.83	-0.8
1,501,144	-		Echvi_1305	0.83	-0.0
1,501,160	+		Echvi_1305	0.86	-1.7
1,501,298	+				+0.2
1,501,326	-				-0.1
1,501,358	-				-0.2
1,501,358	-				-0.7
1,501,360	-				+0.2
1,501,367	-				-0.0
1,501,371	-				-0.3
1,501,371	-				+0.2
1,501,371	-				-1.5
1,501,416	+				-1.4
1,501,440	+				-2.7
1,501,446	-				-0.2
1,501,446	-				-0.2
1,501,449	+				-0.7
1,501,458	+				-1.6
1,501,480	+				-0.5
1,501,488	+				-1.0
1,501,489	-				-1.3
1,501,489	-				+0.2
1,501,494	+				-1.5
1,501,501	+				-0.4
1,501,502	-				-0.7
1,501,557	+				+0.1
1,501,687	+		Echvi_1306	0.12	+0.3
1,501,687	+		Echvi_1306	0.12	+1.0
1,501,687	+		Echvi_1306	0.12	-0.5
1,501,687	+		Echvi_1306	0.12	-0.7
1,501,687	+		Echvi_1306	0.12	-1.4
1,501,687	+		Echvi_1306	0.12	+0.3
1,501,688	-		Echvi_1306	0.12	-1.4
1,501,688	-		Echvi_1306	0.12	-0.4
1,501,688	-		Echvi_1306	0.12	-0.2
1,501,688	-		Echvi_1306	0.12	-1.2
1,501,688	-		Echvi_1306	0.12	-2.1
1,501,793	-		Echvi_1306	0.18	-0.3
1,501,833	+		Echvi_1306	0.21	-0.8
1,501,927	+		Echvi_1306	0.27	+0.4
1,501,927	+		Echvi_1306	0.27	-1.9
1,501,928	-		Echvi_1306	0.27	-0.5
1,501,939	+		Echvi_1306	0.27	-2.2
1,501,961	+		Echvi_1306	0.29	-0.8
1,502,005	+		Echvi_1306	0.31	+1.4
1,502,005	+		Echvi_1306	0.31	-0.9
1,502,005	+		Echvi_1306	0.31	+0.5
1,502,005	+		Echvi_1306	0.31	-1.0
1,502,005	+		Echvi_1306	0.31	-0.2
1,502,040	+		Echvi_1306	0.34	-0.9
1,502,040	+		Echvi_1306	0.34	-1.0
1,502,075	+		Echvi_1306	0.36	-0.4
1,502,076	-		Echvi_1306	0.36	-2.1
1,502,076	-		Echvi_1306	0.36	+0.2
1,502,076	-		Echvi_1306	0.36	-0.3
1,502,077	+		Echvi_1306	0.36	-1.0
1,502,077	+		Echvi_1306	0.36	-1.1
1,502,077	+		Echvi_1306	0.36	-1.7
1,502,077	+		Echvi_1306	0.36	-1.4
1,502,077	+		Echvi_1306	0.36	-2.0
1,502,078	-		Echvi_1306	0.36	-0.9
1,502,114	+		Echvi_1306	0.38	+1.7
1,502,114	+		Echvi_1306	0.38	-0.0
1,502,115	-		Echvi_1306	0.38	-3.0
1,502,152	+		Echvi_1306	0.41	-0.7
1,502,153	-		Echvi_1306	0.41	+1.0
1,502,154	+		Echvi_1306	0.41	+0.1
1,502,378	+		Echvi_1306	0.55	-2.8
1,502,379	-		Echvi_1306	0.55	-1.0
1,502,429	-		Echvi_1306	0.58	+0.4
1,502,431	+		Echvi_1306	0.58	-1.1
1,502,432	-		Echvi_1306	0.58	-0.4
1,502,495	+		Echvi_1306	0.62	-0.1
1,502,503	+		Echvi_1306	0.62	+0.3
1,502,503	+		Echvi_1306	0.62	-0.9
1,502,504	-		Echvi_1306	0.63	-1.3
1,502,505	+		Echvi_1306	0.63	-1.0
1,502,505	+		Echvi_1306	0.63	-0.5
1,502,505	+		Echvi_1306	0.63	+1.8
1,502,505	+		Echvi_1306	0.63	+0.4
1,502,505	+		Echvi_1306	0.63	-1.0
1,502,505	+		Echvi_1306	0.63	+0.5
1,502,506	-		Echvi_1306	0.63	-0.9
1,502,506	-		Echvi_1306	0.63	-2.4
1,502,506	-		Echvi_1306	0.63	-1.7
1,502,506	-		Echvi_1306	0.63	+0.1
1,502,506	-		Echvi_1306	0.63	-0.3
1,502,506	-		Echvi_1306	0.63	-0.3
1,502,510	+		Echvi_1306	0.63	+0.1
1,502,510	+		Echvi_1306	0.63	-1.3
1,502,686	-		Echvi_1306	0.74	-0.9
1,502,753	+		Echvi_1306	0.78	-0.9
1,502,782	+		Echvi_1306	0.80	-0.2
1,502,782	+		Echvi_1306	0.80	-0.6
1,502,782	+		Echvi_1306	0.80	-0.9
1,502,783	-		Echvi_1306	0.80	-1.1
1,502,811	+		Echvi_1306	0.82	+1.5
1,502,872	+		Echvi_1306	0.85	-2.6
1,502,873	-		Echvi_1306	0.86	-1.7
1,502,897	-		Echvi_1306	0.87	+1.5
1,502,897	-		Echvi_1306	0.87	+1.1
1,502,970	+				+1.4
1,502,970	+				+1.5
1,503,090	+				-0.0
1,503,108	-				+0.5
1,503,141	+				-0.4
1,503,200	-				+0.1
1,503,207	-				+0.9
1,503,266	-				-0.3
1,503,281	-				+0.1
1,503,293	+				+1.0
1,503,293	+				-0.4
1,503,294	-				-0.4
1,503,294	-				-1.5
1,503,315	+				+0.5
1,503,316	-				-0.0
1,503,355	-				-0.8
1,503,438	-				-0.4
1,503,464	-				+0.8
1,503,478	+				-0.6
1,503,521	+		Echvi_1307	0.12	-3.4
1,503,522	-		Echvi_1307	0.12	+0.4
1,503,523	+		Echvi_1307	0.13	-1.4
1,503,524	-		Echvi_1307	0.13	-0.2
1,503,527	+				+2.0
1,503,528	-		Echvi_1307	0.13	+0.4
1,503,528	-		Echvi_1307	0.13	-0.8
1,503,539	+		Echvi_1307	0.13	+0.4
1,503,540	-		Echvi_1307	0.14	-1.6
1,503,564	+		Echvi_1307	0.15	-0.4
1,503,564	+		Echvi_1307	0.15	+0.0
1,503,567	-		Echvi_1307	0.15	+1.9
1,503,567	-		Echvi_1307	0.15	+0.4
1,503,568	+		Echvi_1307	0.15	-0.0
1,503,569	-		Echvi_1307	0.15	-2.4
1,503,569	-		Echvi_1307	0.15	-2.3
1,503,614	+		Echvi_1307	0.18	-1.4
1,503,615	-		Echvi_1307	0.18	+1.3
1,503,671	-		Echvi_1307	0.22	-2.1
1,503,672	+		Echvi_1307	0.22	+0.1
1,503,672	+		Echvi_1307	0.22	-1.0
1,503,673	-		Echvi_1307	0.22	+0.7
1,503,774	+		Echvi_1307	0.28	-1.2
1,503,774	+		Echvi_1307	0.28	+0.1
1,503,775	-		Echvi_1307	0.28	-1.5
1,503,863	-		Echvi_1307	0.33	+0.4
1,503,875	+		Echvi_1307	0.34	+0.1
1,503,876	-		Echvi_1307	0.34	+0.4
1,503,876	-		Echvi_1307	0.34	-1.6
1,503,879	-		Echvi_1307	0.34	+0.1
1,503,939	-		Echvi_1307	0.38	-0.8
1,503,965	+		Echvi_1307	0.40	-2.7
1,503,967	+		Echvi_1307	0.40	-1.9
1,503,980	+		Echvi_1307	0.41	-0.7
1,503,980	+		Echvi_1307	0.41	+0.0
1,503,983	-		Echvi_1307	0.41	-0.4