Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1243

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
1,425,428	-		Echvi_1242	0.35	-0.1
1,425,559	-		Echvi_1242	0.56	+0.0
1,425,585	-		Echvi_1242	0.61	+3.2
1,425,585	-		Echvi_1242	0.61	+2.3
1,425,585	-		Echvi_1242	0.61	+0.1
1,425,585	-		Echvi_1242	0.61	+1.1
1,425,632	-		Echvi_1242	0.68	-0.7
1,425,632	-		Echvi_1242	0.68	+0.7
1,425,639	-		Echvi_1242	0.70	-0.6
1,425,653	+		Echvi_1242	0.72	+0.1
1,425,653	+		Echvi_1242	0.72	+0.1
1,425,653	+		Echvi_1242	0.72	-1.7
1,425,653	+		Echvi_1242	0.72	+0.1
1,425,653	+		Echvi_1242	0.72	-0.3
1,425,654	-		Echvi_1242	0.72	+0.2
1,425,654	-		Echvi_1242	0.72	-0.1
1,425,654	-		Echvi_1242	0.72	+2.6
1,425,660	+		Echvi_1242	0.73	+0.8
1,425,661	-		Echvi_1242	0.73	+0.5
1,425,693	+		Echvi_1242	0.79	+1.1
1,425,763	+				+1.2
1,425,770	+				+0.6
1,425,770	+				-0.7
1,425,770	+				-2.1
1,425,770	+				+0.5
1,425,770	+				-0.3
1,425,778	+				-0.4
1,425,779	-				-0.2
1,425,798	+				+0.7
1,425,799	-				+1.7
1,425,820	+				-0.4
1,425,820	+				+0.0
1,425,821	-				-0.7
1,425,933	+				-1.2
1,425,933	+				-0.7
1,425,933	+				+0.0
1,425,934	-				-0.5
1,425,934	-				-1.7
1,425,943	+				+1.0
1,425,943	+				-0.3
1,425,943	+				+0.1
1,425,943	+				+1.1
1,425,944	-				+1.3
1,425,951	-				+1.1
1,425,951	-				+0.2
1,425,954	+				-0.4
1,425,955	-				+1.3
1,425,955	-				-1.8
1,425,960	+				+0.3
1,425,960	+				-1.3
1,425,960	+				-1.6
1,425,961	-				+0.3
1,426,150	+				-0.5
1,426,151	-				-1.5
1,426,151	-				-1.1
1,426,160	+				-1.4
1,426,161	-				-0.2
1,426,211	-				+0.5
1,426,231	-				-0.7
1,426,275	+				+1.2
1,426,276	-				+0.2
1,426,285	-				+0.1
1,426,322	-				-0.6
1,426,322	-				-0.1
1,426,322	-				+0.7
1,426,344	-				+0.4
1,426,344	-				-0.8
1,426,376	+				+0.2
1,426,377	-				+0.0
1,426,381	+				+0.3
1,426,390	+				-1.4
1,426,390	+				+0.3
1,426,395	+				-0.1
1,426,395	+				-0.3
1,426,395	+				-1.6
1,426,402	-				-2.7
1,426,424	+				+0.5
1,426,425	-				-0.9
1,426,444	+				+0.1
1,426,445	-				-0.7
1,426,494	-				+1.7
1,426,532	+				+0.6
1,426,533	-				+0.1
1,426,553	-		Echvi_1243	0.10	-1.7
1,426,553	-		Echvi_1243	0.10	+0.7
1,426,621	+		Echvi_1243	0.15	-0.4
1,426,621	+		Echvi_1243	0.15	-2.6
1,426,622	-		Echvi_1243	0.15	+1.0
1,426,773	-		Echvi_1243	0.25	-0.2
1,426,830	-		Echvi_1243	0.29	+1.1
1,426,906	+		Echvi_1243	0.34	+0.3
1,426,940	+		Echvi_1243	0.36	+0.2
1,426,940	+		Echvi_1243	0.36	+1.8
1,427,035	+		Echvi_1243	0.43	+0.9
1,427,036	-		Echvi_1243	0.43	-1.8
1,427,120	+		Echvi_1243	0.49	-0.9
1,427,121	-		Echvi_1243	0.49	-0.9
1,427,326	+		Echvi_1243	0.62	+0.6
1,427,327	-		Echvi_1243	0.63	+2.9
1,427,500	-		Echvi_1243	0.74	+1.1
1,427,500	-		Echvi_1243	0.74	-0.4
1,427,564	+		Echvi_1243	0.79	-0.1
1,427,564	+		Echvi_1243	0.79	+0.9
1,427,627	-		Echvi_1243	0.83	+0.3
1,427,680	+		Echvi_1243	0.86	-1.8
1,427,695	+		Echvi_1243	0.87	+0.2
1,427,696	-		Echvi_1243	0.87	-0.8
1,427,792	+				+0.0
1,427,792	+				-1.5
1,427,792	+				-1.0
1,427,793	-				-0.7
1,427,793	-				+1.1
1,427,793	-				+0.9
1,427,795	-				-0.1
1,427,831	-				-2.7
1,427,840	+				+0.3
1,427,841	-				-0.4
1,427,851	+				-0.3
1,427,884	+				+0.9
1,427,884	+				-0.1
1,427,884	+				-1.7
1,427,884	+				+0.8
1,427,884	+				-0.1
1,427,944	+				-0.2
1,427,958	+				-0.1
1,427,958	+				-1.1
1,428,017	+				+0.2
1,428,096	+				-0.1
1,428,096	+				-1.3
1,428,096	+				+1.0
1,428,096	+				-1.2
1,428,097	-				-1.1
1,428,140	-				-1.7
1,428,217	+				+2.3
1,428,217	+				-0.7
1,428,217	+				+0.5
1,428,307	+				-0.8
1,428,307	+				-0.9
1,428,307	+				-0.4
1,428,308	-				-0.1
1,428,332	-				-1.5
1,428,359	+		Echvi_1244	0.11	+0.8
1,428,359	+		Echvi_1244	0.11	+1.7
1,428,394	+		Echvi_1244	0.11	-0.4
1,428,433	+		Echvi_1244	0.12	+0.8
1,428,433	+		Echvi_1244	0.12	+0.3
1,428,465	+		Echvi_1244	0.13	-0.6
1,428,649	-		Echvi_1244	0.17	-1.2
1,428,688	-		Echvi_1244	0.18	-1.5
1,428,724	+		Echvi_1244	0.19	+0.1
1,428,724	+		Echvi_1244	0.19	-0.6
1,428,724	+		Echvi_1244	0.19	-2.3
1,428,724	+		Echvi_1244	0.19	-0.1
1,428,728	+		Echvi_1244	0.19	+0.9
1,428,770	+		Echvi_1244	0.20	+0.2
1,428,837	+		Echvi_1244	0.21	-0.3
1,428,865	-		Echvi_1244	0.22	+0.1