Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1231

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
1,414,599	-		Echvi_1230	0.88	-0.4
1,414,634	+		Echvi_1230	0.89	-1.1
1,414,634	+		Echvi_1230	0.89	-1.9
1,414,634	+		Echvi_1230	0.89	-0.8
1,414,634	+		Echvi_1230	0.89	-3.1
1,414,635	-		Echvi_1230	0.89	-0.4
1,414,635	-		Echvi_1230	0.89	+1.2
1,414,635	-		Echvi_1230	0.89	+0.0
1,414,635	-		Echvi_1230	0.89	-2.9
1,414,635	-		Echvi_1230	0.89	-1.7
1,414,640	+		Echvi_1230	0.89	-2.3
1,414,641	-		Echvi_1230	0.89	-0.7
1,414,664	+		Echvi_1230	0.90	-0.3
1,414,664	+		Echvi_1230	0.90	-0.8
1,414,681	-				-1.5
1,414,685	+				-1.7
1,414,685	+				-2.3
1,414,685	+				+0.1
1,414,685	+				-0.9
1,414,685	+				-1.8
1,414,686	-				-0.5
1,414,686	-				-1.5
1,414,686	-				-1.4
1,414,686	-				-1.5
1,414,689	+				-2.5
1,414,690	-				-1.5
1,414,690	-				-3.0
1,414,690	-				-1.2
1,414,695	+				+0.3
1,414,695	+				+0.2
1,414,695	+				-0.9
1,414,732	-				-0.4
1,414,772	+				-0.2
1,414,772	+				-1.8
1,414,772	+				-1.0
1,414,773	-				-1.4
1,414,777	+				-0.3
1,414,778	-				-0.1
1,414,778	-				-1.7
1,414,780	+				-0.8
1,414,780	+				-0.7
1,414,780	+				-0.6
1,414,788	-				-1.2
1,414,828	+				+3.5
1,414,855	+				+0.2
1,414,856	-				+0.8
1,414,896	+				+1.6
1,414,896	+				-2.6
1,414,896	+				-0.5
1,414,896	+				-1.1
1,414,897	-				-1.1
1,414,897	-				-0.1
1,414,897	-				+0.2
1,414,897	-				-1.0
1,414,930	+				-0.6
1,415,004	+				-1.0
1,415,005	-				+0.2
1,415,006	+				-1.4
1,415,007	-				-1.5
1,415,007	-				+0.9
1,415,008	+				-1.0
1,415,008	+				-0.3
1,415,008	+				-0.4
1,415,008	+				+0.9
1,415,009	-				+0.5
1,415,012	+				-0.1
1,415,012	+				+0.1
1,415,013	-				+0.0
1,415,013	-				+0.5
1,415,025	+				+0.3
1,415,025	+				+0.0
1,415,030	+				-0.2
1,415,057	+				-1.9
1,415,080	+				-0.9
1,415,085	-				+0.2
1,415,114	-				-0.9
1,415,116	+				-0.2
1,415,120	-				+0.3
1,415,294	-				-1.7
1,415,294	-				-1.7
1,415,294	-				-2.8
1,415,297	+				+0.3
1,415,297	+				+1.4
1,415,333	+				-0.6
1,415,333	+				-0.4
1,415,362	+				+0.9
1,415,394	+				+0.2
1,415,438	+				-1.6
1,415,438	+				-1.7
1,415,439	-				-0.3
1,415,442	+				-0.7
1,415,445	+				+1.2
1,415,534	-				-1.1
1,415,544	-				+0.3
1,415,648	-				+0.1
1,415,648	-				-0.4
1,415,713	+		Echvi_1231	0.11	+1.6
1,415,713	+		Echvi_1231	0.11	-0.3
1,415,713	+		Echvi_1231	0.11	+0.0
1,415,713	+		Echvi_1231	0.11	+0.1
1,415,713	+		Echvi_1231	0.11	+0.3
1,415,720	+		Echvi_1231	0.11	+1.3
1,415,793	-		Echvi_1231	0.18	-0.0
1,415,825	+		Echvi_1231	0.20	-2.3
1,415,825	+		Echvi_1231	0.20	-1.1
1,415,826	-		Echvi_1231	0.20	+1.3
1,415,862	-		Echvi_1231	0.23	+1.4
1,415,965	+		Echvi_1231	0.32	+1.5
1,415,965	+		Echvi_1231	0.32	-1.2
1,415,965	+		Echvi_1231	0.32	+1.9
1,415,966	-		Echvi_1231	0.32	-0.7
1,415,966	-		Echvi_1231	0.32	-0.5
1,416,016	+		Echvi_1231	0.37	-0.4
1,416,023	+		Echvi_1231	0.37	-0.4
1,416,024	-		Echvi_1231	0.37	+1.1
1,416,046	+		Echvi_1231	0.39	-0.0
1,416,046	+		Echvi_1231	0.39	+0.2
1,416,047	-		Echvi_1231	0.39	-0.1
1,416,048	+		Echvi_1231	0.39	+0.3
1,416,056	+		Echvi_1231	0.40	-1.0
1,416,056	+		Echvi_1231	0.40	+0.7
1,416,056	+		Echvi_1231	0.40	-0.2
1,416,056	+		Echvi_1231	0.40	-0.5
1,416,056	+				+2.9
1,416,057	-		Echvi_1231	0.40	+0.2
1,416,057	-		Echvi_1231	0.40	+0.5
1,416,062	+		Echvi_1231	0.41	-0.2
1,416,100	+		Echvi_1231	0.44	+0.9
1,416,100	+		Echvi_1231	0.44	-0.5
1,416,101	-		Echvi_1231	0.44	-0.4
1,416,101	-		Echvi_1231	0.44	-0.1
1,416,101	-		Echvi_1231	0.44	+0.3
1,416,101	-		Echvi_1231	0.44	-0.9
1,416,101	-		Echvi_1231	0.44	-0.0
1,416,112	-		Echvi_1231	0.45	-0.7
1,416,281	+		Echvi_1231	0.59	-0.9
1,416,282	-		Echvi_1231	0.59	+0.5
1,416,282	-		Echvi_1231	0.59	-0.5
1,416,282	-		Echvi_1231	0.59	+0.9
1,416,292	+		Echvi_1231	0.60	+0.6
1,416,382	-		Echvi_1231	0.68	+1.0
1,416,404	+		Echvi_1231	0.70	+1.1
1,416,411	+		Echvi_1231	0.71	+0.9
1,416,412	-		Echvi_1231	0.71	+0.6
1,416,413	+		Echvi_1231	0.71	+0.2
1,416,413	+		Echvi_1231	0.71	+0.5
1,416,413	+		Echvi_1231	0.71	+0.8
1,416,414	-		Echvi_1231	0.71	+0.5
1,416,414	-		Echvi_1231	0.71	+0.3
1,416,414	-		Echvi_1231	0.71	+1.9
1,416,472	+		Echvi_1231	0.76	-0.7
1,416,472	+		Echvi_1231	0.76	+0.7
1,416,482	+		Echvi_1231	0.77	+0.4
1,416,482	+		Echvi_1231	0.77	+0.9
1,416,482	+		Echvi_1231	0.77	+0.3
1,416,483	-		Echvi_1231	0.77	+1.0
1,416,483	-		Echvi_1231	0.77	-0.5
1,416,491	+		Echvi_1231	0.77	+0.5
1,416,521	+		Echvi_1231	0.80	+1.6
1,416,521	+		Echvi_1231	0.80	-0.6
1,416,521	+		Echvi_1231	0.80	+0.3
1,416,522	-		Echvi_1231	0.80	+2.4
1,416,575	+		Echvi_1231	0.85	+0.5
1,416,575	+		Echvi_1231	0.85	-0.1
1,416,584	-		Echvi_1231	0.85	+0.3
1,416,605	+		Echvi_1231	0.87	+0.3
1,416,606	-		Echvi_1231	0.87	-0.7
1,416,616	+		Echvi_1231	0.88	-1.4
1,416,660	-				+1.2
1,416,723	-				+0.2
1,416,723	-				+0.8
1,416,723	-				-1.1
1,416,727	+				-1.3
1,416,728	-				+0.7
1,416,728	-				+0.0
1,416,926	+		Echvi_1232	0.39	-0.8
1,416,927	-		Echvi_1232	0.39	-0.1
1,416,927	-		Echvi_1232	0.39	+1.6
1,416,955	+		Echvi_1232	0.46	+0.7
1,416,956	-		Echvi_1232	0.46	+1.2
1,417,004	+		Echvi_1232	0.59	+0.9
1,417,005	-		Echvi_1232	0.59	+0.2
1,417,026	-		Echvi_1232	0.64	-0.0
1,417,032	+		Echvi_1232	0.66	-0.6
1,417,095	-		Echvi_1232	0.82	-0.3
1,417,101	-		Echvi_1232	0.84	+0.3
1,417,104	+		Echvi_1232	0.84	-1.1
1,417,105	-		Echvi_1232	0.85	-0.8
1,417,115	+		Echvi_1232	0.87	-1.8
1,417,115	+		Echvi_1232	0.87	-0.3
1,417,116	-		Echvi_1232	0.88	-2.2
1,417,116	-		Echvi_1232	0.88	+0.3
1,417,116	-		Echvi_1232	0.88	-1.0
1,417,116	-		Echvi_1232	0.88	+0.5
1,417,117	+		Echvi_1232	0.88	+1.3
1,417,118	-		Echvi_1232	0.88	-0.7
1,417,220	+				-2.5
1,417,260	+				-0.4
1,417,267	-				+0.2
1,417,267	-				+1.0
1,417,267	-				-0.7
1,417,267	-				+0.1
1,417,267	-				-0.4
1,417,316	+				+0.3
1,417,317	-				-1.8
1,417,317	-				+0.3
1,417,336	+				+0.5
1,417,475	+		Echvi_1233	0.19	-1.4
1,417,475	+		Echvi_1233	0.19	+0.5
1,417,476	-		Echvi_1233	0.19	+1.9
1,417,476	-		Echvi_1233	0.19	-0.7
1,417,563	+		Echvi_1233	0.26	-1.7
1,417,564	-		Echvi_1233	0.26	-1.7
1,417,564	-		Echvi_1233	0.26	-1.2
1,417,573	+		Echvi_1233	0.27	-0.3
1,417,647	-		Echvi_1233	0.32	-1.0
1,417,647	-		Echvi_1233	0.32	-0.1
1,417,700	+		Echvi_1233	0.36	+0.3
1,417,701	-		Echvi_1233	0.36	-2.8
1,417,701	-		Echvi_1233	0.36	-0.3
1,417,746	+		Echvi_1233	0.40	+0.3