Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1185

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
1,359,826	+		Echvi_1182	0.25	+0.4
1,359,827	-		Echvi_1182	0.25	-0.4
1,359,827	-		Echvi_1182	0.25	-0.2
1,359,994	-		Echvi_1182	0.63	-1.0
1,359,994	-		Echvi_1182	0.63	+0.9
1,360,025	+		Echvi_1182	0.71	+0.1
1,360,026	-		Echvi_1182	0.71	+0.0
1,360,026	-		Echvi_1182	0.71	-2.8
1,360,026	-		Echvi_1182	0.71	-0.2
1,360,090	-		Echvi_1182	0.86	+0.4
1,360,111	+				-0.2
1,360,126	-				+0.0
1,360,126	-				-0.2
1,360,126	-				-2.1
1,360,126	-				+0.7
1,360,141	-				+0.9
1,360,185	-				+1.6
1,360,225	+				+1.4
1,360,277	+		Echvi_1183	0.17	+0.0
1,360,277	+		Echvi_1183	0.17	+0.9
1,360,277	+		Echvi_1183	0.17	+0.2
1,360,279	+		Echvi_1183	0.17	-0.5
1,360,279	+				+2.5
1,360,280	-		Echvi_1183	0.17	-0.4
1,360,280	-		Echvi_1183	0.17	-0.4
1,360,303	-		Echvi_1183	0.25	-1.5
1,360,335	+		Echvi_1183	0.35	+0.0
1,360,335	+		Echvi_1183	0.35	-1.0
1,360,347	+		Echvi_1183	0.38	+0.4
1,360,347	+		Echvi_1183	0.38	+0.6
1,360,351	-		Echvi_1183	0.40	-0.4
1,360,359	+		Echvi_1183	0.42	-1.1
1,360,370	+		Echvi_1183	0.45	-0.0
1,360,382	+		Echvi_1183	0.49	+1.0
1,360,383	-		Echvi_1183	0.50	-0.1
1,360,418	+		Echvi_1183	0.60	+0.1
1,360,418	+		Echvi_1183	0.60	-0.2
1,360,497	-		Echvi_1183	0.85	-1.1
1,360,497	-		Echvi_1183	0.85	+1.0
1,360,561	+				-0.7
1,360,561	+				+0.3
1,360,562	-				-0.8
1,360,563	+				+1.1
1,360,563	+				-0.2
1,360,569	+				-0.7
1,360,569	+				-0.4
1,360,569	+				+0.3
1,360,570	-				-0.2
1,360,572	+				+0.4
1,360,572	+				-0.1
1,360,572	+				+0.8
1,360,585	+				-0.3
1,360,585	+				+0.4
1,360,585	+				-0.2
1,360,623	+				-1.1
1,360,623	+				+0.8
1,360,623	+				+2.1
1,360,624	-				-1.9
1,360,648	+				+1.5
1,360,649	-				-1.7
1,360,649	-				+1.2
1,360,694	+				-0.2
1,360,790	+		Echvi_1184	0.83	-0.4
1,360,795	+		Echvi_1184	0.87	-0.2
1,360,795	+		Echvi_1184	0.87	-0.0
1,360,795	+		Echvi_1184	0.87	-1.7
1,360,796	-		Echvi_1184	0.88	-1.3
1,360,796	-		Echvi_1184	0.88	-0.1
1,360,799	-				+0.8
1,360,815	+				-1.8
1,360,815	+				-0.4
1,360,816	-				-1.2
1,360,865	+				+2.5
1,360,879	-		Echvi_1185	0.11	-0.5
1,360,881	+		Echvi_1185	0.12	-0.3
1,360,912	-		Echvi_1185	0.18	-0.5
1,360,914	+		Echvi_1185	0.18	-1.5
1,360,914	+		Echvi_1185	0.18	+0.2
1,360,923	+		Echvi_1185	0.20	+2.3
1,360,939	-		Echvi_1185	0.23	-1.0
1,360,944	+		Echvi_1185	0.24	-3.4
1,360,944	+		Echvi_1185	0.24	-1.3
1,360,993	+		Echvi_1185	0.34	+1.7
1,361,038	+		Echvi_1185	0.43	+0.4
1,361,038	+		Echvi_1185	0.43	-0.0
1,361,052	+		Echvi_1185	0.46	+0.2
1,361,054	+		Echvi_1185	0.46	+1.3
1,361,059	+		Echvi_1185	0.47	+0.8
1,361,059	+		Echvi_1185	0.47	+0.2
1,361,060	-		Echvi_1185	0.48	-0.1
1,361,060	-		Echvi_1185	0.48	-0.3
1,361,073	+		Echvi_1185	0.50	-0.6
1,361,080	+		Echvi_1185	0.51	+0.9
1,361,081	-		Echvi_1185	0.52	+0.5
1,361,081	-		Echvi_1185	0.52	-2.6
1,361,083	-		Echvi_1185	0.52	+0.3
1,361,128	+		Echvi_1185	0.61	-0.6
1,361,129	-		Echvi_1185	0.61	-0.6
1,361,129	-		Echvi_1185	0.61	-0.7
1,361,141	+		Echvi_1185	0.64	+1.1
1,361,142	-		Echvi_1185	0.64	+1.5
1,361,142	-		Echvi_1185	0.64	+0.2
1,361,142	-		Echvi_1185	0.64	-0.3
1,361,144	-		Echvi_1185	0.64	+0.4
1,361,158	-		Echvi_1185	0.67	+1.0
1,361,231	-		Echvi_1185	0.82	-1.4
1,361,304	-				-0.2
1,361,304	-				+0.7
1,361,308	-				-0.8
1,361,466	-				-0.9
1,361,476	+				-0.7
1,361,498	+				+0.1
1,361,554	-				-1.6
1,361,565	+				+0.9
1,361,685	+		Echvi_1186	0.31	+2.2
1,361,989	-				+0.1