Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1173

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
1,348,004	+		Echvi_1172	0.75	-2.5
1,348,005	-		Echvi_1172	0.75	-0.9
1,348,005	-		Echvi_1172	0.75	+0.3
1,348,005	-		Echvi_1172	0.75	-0.2
1,348,093	+		Echvi_1172	0.77	-1.1
1,348,162	+		Echvi_1172	0.80	-0.5
1,348,162	+		Echvi_1172	0.80	+0.5
1,348,192	+		Echvi_1172	0.80	-0.4
1,348,193	-		Echvi_1172	0.80	+1.8
1,348,193	-		Echvi_1172	0.80	+0.5
1,348,193	-		Echvi_1172	0.80	-0.8
1,348,197	+		Echvi_1172	0.81	-0.8
1,348,236	+		Echvi_1172	0.82	-2.0
1,348,236	+		Echvi_1172	0.82	-0.6
1,348,263	+		Echvi_1172	0.83	+1.4
1,348,295	-		Echvi_1172	0.84	+0.0
1,348,380	+		Echvi_1172	0.86	-2.5
1,348,381	-		Echvi_1172	0.86	+0.7
1,348,428	-		Echvi_1172	0.88	+0.3
1,348,496	+		Echvi_1172	0.90	-0.9
1,348,513	+				-0.2
1,348,513	+				-1.8
1,348,513	+				+0.6
1,348,514	-				+1.2
1,348,514	-				+0.3
1,348,515	+				+0.4
1,348,515	+				-0.7
1,348,515	+				-1.5
1,348,515	+				+0.5
1,348,515	+				-1.6
1,348,515	+				+1.3
1,348,516	-				-1.4
1,348,516	-				+0.0
1,348,516	-				+2.9
1,348,516	-				+0.2
1,348,516	-				+0.4
1,348,516	-				+0.3
1,348,516	-				+1.7
1,348,525	-				+1.2
1,348,564	-				+0.5
1,348,564	-				+0.2
1,348,569	+				+0.2
1,348,570	-				+1.5
1,348,570	-				+0.7
1,348,570	-				-0.3
1,348,613	+				-2.9
1,348,613	+				+0.8
1,348,614	-				+1.9
1,348,624	+				-2.0
1,348,624	+				-0.5
1,348,625	-				-0.1
1,348,678	+				-0.3
1,348,679	-				-0.2
1,348,684	+				+0.3
1,348,685	-				+0.6
1,348,688	+				-1.1
1,348,688	+				-0.7
1,348,688	+				-0.9
1,348,688	+				+0.4
1,348,689	-				-0.5
1,348,689	-				+0.9
1,348,787	+				-1.5
1,348,787	+				-0.9
1,348,788	-				-0.7
1,348,803	+				+0.0
1,348,823	+				-0.6
1,348,842	-				-0.5
1,348,873	+				+0.8
1,348,882	+				+0.8
1,348,900	+				+0.0
1,348,919	-				+0.2
1,348,941	+				-0.7
1,348,957	+				+0.5
1,348,962	-				-1.1
1,348,964	-				+0.6
1,349,006	-				+0.7
1,349,107	+		Echvi_1173	0.12	-0.6
1,349,113	-		Echvi_1173	0.12	+1.0
1,349,113	-		Echvi_1173	0.12	-0.4
1,349,186	+		Echvi_1173	0.18	+0.3
1,349,218	+		Echvi_1173	0.21	-0.9
1,349,218	+		Echvi_1173	0.21	-2.5
1,349,240	+		Echvi_1173	0.22	-1.1
1,349,275	-		Echvi_1173	0.25	+0.7
1,349,275	-		Echvi_1173	0.25	+1.5
1,349,297	+		Echvi_1173	0.27	+0.2
1,349,326	+		Echvi_1173	0.29	+0.6
1,349,326	+		Echvi_1173	0.29	-1.6
1,349,326	+		Echvi_1173	0.29	-0.8
1,349,327	-		Echvi_1173	0.29	-0.6
1,349,327	-		Echvi_1173	0.29	-0.4
1,349,327	-		Echvi_1173	0.29	-1.2
1,349,328	+		Echvi_1173	0.29	-1.3
1,349,367	+		Echvi_1173	0.33	+0.1
1,349,368	-		Echvi_1173	0.33	+1.3
1,349,403	+		Echvi_1173	0.35	+0.8
1,349,404	-		Echvi_1173	0.35	-0.5
1,349,431	+		Echvi_1173	0.38	-1.8
1,349,432	-		Echvi_1173	0.38	+0.1
1,349,459	+		Echvi_1173	0.40	-1.8
1,349,460	-		Echvi_1173	0.40	-0.4
1,349,466	-		Echvi_1173	0.40	+0.1
1,349,467	+		Echvi_1173	0.41	-1.3
1,349,468	-		Echvi_1173	0.41	-0.2
1,349,468	-		Echvi_1173	0.41	-0.1
1,349,468	-		Echvi_1173	0.41	+0.6
1,349,554	+		Echvi_1173	0.47	-0.4
1,349,555	-		Echvi_1173	0.48	-0.1
1,349,555	-		Echvi_1173	0.48	+0.1
1,349,578	+		Echvi_1173	0.49	-3.0
1,349,578	+		Echvi_1173	0.49	-0.4
1,349,579	-		Echvi_1173	0.49	+0.6
1,349,579	-		Echvi_1173	0.49	-0.1
1,349,579	-		Echvi_1173	0.49	-1.2
1,349,579	-		Echvi_1173	0.49	+0.6
1,349,579	-		Echvi_1173	0.49	+0.5
1,349,620	+		Echvi_1173	0.53	-0.5
1,349,625	+		Echvi_1173	0.53	-0.5
1,349,626	-		Echvi_1173	0.53	-0.2
1,349,633	-		Echvi_1173	0.54	-2.2
1,349,633	-		Echvi_1173	0.54	-2.0
1,349,636	+		Echvi_1173	0.54	+1.0
1,349,660	-		Echvi_1173	0.56	-0.3
1,349,718	+		Echvi_1173	0.61	-1.6
1,349,724	+		Echvi_1173	0.61	-1.8
1,349,724	+		Echvi_1173	0.61	+0.5
1,349,724	+		Echvi_1173	0.61	-1.4
1,349,725	-		Echvi_1173	0.61	+0.3
1,349,725	-		Echvi_1173	0.61	+0.0
1,349,736	-		Echvi_1173	0.62	+0.8
1,349,736	-		Echvi_1173	0.62	+0.1
1,349,736	-		Echvi_1173	0.62	+0.4
1,349,736	-		Echvi_1173	0.62	-1.5
1,349,736	-		Echvi_1173	0.62	-1.6
1,349,755	-		Echvi_1173	0.64	-0.0
1,349,755	-		Echvi_1173	0.64	+0.3
1,349,756	+		Echvi_1173	0.64	-0.8
1,349,756	+		Echvi_1173	0.64	-0.1
1,349,757	-		Echvi_1173	0.64	+0.0
1,349,834	-		Echvi_1173	0.70	+1.1
1,349,842	+		Echvi_1173	0.71	-1.4
1,349,843	-		Echvi_1173	0.71	-0.8
1,349,843	-		Echvi_1173	0.71	+1.0
1,349,852	-		Echvi_1173	0.71	-1.2
1,349,852	-		Echvi_1173	0.71	-0.4
1,349,852	-		Echvi_1173	0.71	+0.3
1,349,882	+		Echvi_1173	0.74	-2.1
1,349,883	-		Echvi_1173	0.74	-0.5
1,349,883	-		Echvi_1173	0.74	+0.2
1,349,911	+		Echvi_1173	0.76	-2.9
1,349,954	+		Echvi_1173	0.79	-0.9
1,349,955	-		Echvi_1173	0.80	+0.2
1,349,955	-		Echvi_1173	0.80	-2.0
1,349,955	-		Echvi_1173	0.80	-1.7
1,349,955	-		Echvi_1173	0.80	-0.1
1,349,955	-		Echvi_1173	0.80	+0.3
1,349,992	+		Echvi_1173	0.82	-1.2
1,349,993	-		Echvi_1173	0.83	+0.6
1,350,075	+		Echvi_1173	0.89	+0.2
1,350,076	-		Echvi_1173	0.89	+0.3
1,350,076	-		Echvi_1173	0.89	+0.1
1,350,076	-		Echvi_1173	0.89	-0.4
1,350,078	+		Echvi_1173	0.89	-2.7
1,350,079	-		Echvi_1173	0.89	+0.1
1,350,159	+				-2.6
1,350,193	+				-0.0
1,350,210	+				-2.8
1,350,210	+				+0.9
1,350,210	+				-1.0
1,350,211	-				+0.2
1,350,211	-				-1.2
1,350,211	-				-0.7
1,350,211	-				+0.9
1,350,211	-				+0.7
1,350,211	-				-0.2
1,350,211	-				+0.0
1,350,214	+				-0.8
1,350,214	+				-0.8
1,350,214	+				-0.3
1,350,215	-				-0.1
1,350,215	-				+0.2
1,350,215	-				+1.5
1,350,218	+				-1.2
1,350,219	-				-0.6
1,350,223	+				-1.3
1,350,250	+				+0.1
1,350,250	+				-1.2
1,350,251	-				-0.3
1,350,251	-				-0.1
1,350,251	-				-0.7
1,350,302	-				-1.4
1,350,309	-				-1.2
1,350,360	+				-0.2
1,350,361	-				-2.9
1,350,369	+				-0.8
1,350,379	+				-1.2
1,350,379	+				+0.9
1,350,400	-				-3.1
1,350,444	+				-2.0
1,350,445	-				-2.9
1,350,469	-				-4.2
1,350,513	+		Echvi_1174	0.14	-1.8
1,350,576	+		Echvi_1174	0.28	-3.1
1,350,576	+		Echvi_1174	0.28	-3.0
1,350,576	+		Echvi_1174	0.28	-0.9
1,350,577	-		Echvi_1174	0.28	-1.8
1,350,603	+		Echvi_1174	0.34	+0.3
1,350,604	-		Echvi_1174	0.34	-1.4
1,350,612	+		Echvi_1174	0.35	-3.1
1,350,641	+		Echvi_1174	0.42	-2.2
1,350,642	-		Echvi_1174	0.42	-1.9
1,350,642	-		Echvi_1174	0.42	-2.7
1,350,643	+		Echvi_1174	0.42	-1.7
1,350,643	+		Echvi_1174	0.42	-0.9
1,350,643	+		Echvi_1174	0.42	-1.5
1,350,644	-		Echvi_1174	0.42	-1.5
1,350,644	-		Echvi_1174	0.42	-1.8
1,350,644	-		Echvi_1174	0.42	-2.9
1,350,644	-		Echvi_1174	0.42	-1.8
1,350,648	+		Echvi_1174	0.43	-3.0
1,350,648	+		Echvi_1174	0.43	-3.4
1,350,648	+		Echvi_1174	0.43	-2.0
1,350,697	-		Echvi_1174	0.54	-0.9
1,350,713	+		Echvi_1174	0.57	-2.0
1,350,713	+		Echvi_1174	0.57	-0.8
1,350,713	+		Echvi_1174	0.57	-0.7
1,350,714	-		Echvi_1174	0.57	-0.7
1,350,714	-		Echvi_1174	0.57	-3.2
1,350,714	-		Echvi_1174	0.57	-2.3
1,350,714	-		Echvi_1174	0.57	-2.7
1,350,714	-		Echvi_1174	0.57	-3.1
1,350,714	-		Echvi_1174	0.57	-0.1
1,350,714	-		Echvi_1174	0.57	-2.2
1,350,715	+		Echvi_1174	0.57	-2.1
1,350,715	+		Echvi_1174	0.57	+0.9
1,350,716	-		Echvi_1174	0.58	-3.7
1,350,914	-				-1.6
1,350,928	+				+0.4
1,350,928	+				-0.7
1,350,939	+				-0.1
1,350,940	-				-2.7
1,350,983	+				+0.1
1,350,989	+				-1.1
1,351,000	-				-1.2
1,351,002	+				-0.1
1,351,167	+				-0.3
1,351,181	-				-0.8
1,351,189	+				-1.6
1,351,189	+				-1.2
1,351,189	+				+0.7
1,351,190	-				-0.4