Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1135

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
1,295,797	-				+1.0
1,295,808	-				-0.8
1,295,808	-				+1.4
1,295,834	+				-2.2
1,295,834	+				-0.1
1,295,834	+				-0.2
1,295,947	+				-0.4
1,295,999	+				-0.7
1,296,020	+				-1.1
1,296,090	+		Echvi_1134	0.10	+1.3
1,296,093	+		Echvi_1134	0.11	-0.2
1,296,093	+		Echvi_1134	0.11	+1.4
1,296,098	+		Echvi_1134	0.11	+0.6
1,296,120	+		Echvi_1134	0.14	+0.9
1,296,120	+		Echvi_1134	0.14	-1.5
1,296,133	+		Echvi_1134	0.16	-0.4
1,296,133	+		Echvi_1134	0.16	+0.7
1,296,211	+		Echvi_1134	0.26	+2.9
1,296,212	-		Echvi_1134	0.26	-0.2
1,296,213	+		Echvi_1134	0.27	+0.9
1,296,213	+		Echvi_1134	0.27	+0.4
1,296,213	+		Echvi_1134	0.27	-0.3
1,296,218	+		Echvi_1134	0.27	+0.9
1,296,218	+		Echvi_1134	0.27	+1.3
1,296,219	-		Echvi_1134	0.27	-0.6
1,296,219	-		Echvi_1134	0.27	-0.2
1,296,225	+		Echvi_1134	0.28	+0.1
1,296,333	+		Echvi_1134	0.42	+0.9
1,296,333	+		Echvi_1134	0.42	+0.2
1,296,333	+		Echvi_1134	0.42	+0.1
1,296,333	+		Echvi_1134	0.42	+1.9
1,296,334	-		Echvi_1134	0.43	-0.9
1,296,334	-		Echvi_1134	0.43	-2.9
1,296,359	+		Echvi_1134	0.46	+1.0
1,296,360	-		Echvi_1134	0.46	+0.1
1,296,360	-		Echvi_1134	0.46	-1.1
1,296,417	+		Echvi_1134	0.54	+0.5
1,296,470	+		Echvi_1134	0.61	-0.1
1,296,470	+		Echvi_1134	0.61	-0.8
1,296,470	+		Echvi_1134	0.61	+0.1
1,296,470	+		Echvi_1134	0.61	+1.4
1,296,470	+		Echvi_1134	0.61	+0.1
1,296,470	+		Echvi_1134	0.61	-1.5
1,296,471	-		Echvi_1134	0.61	+2.1
1,296,471	-		Echvi_1134	0.61	-0.9
1,296,483	+		Echvi_1134	0.62	+0.1
1,296,544	-		Echvi_1134	0.71	+0.6
1,296,544	-		Echvi_1134	0.71	-0.6
1,296,558	+		Echvi_1134	0.72	+0.9
1,296,558	+		Echvi_1134	0.72	+0.4
1,296,614	+		Echvi_1134	0.80	-1.0
1,296,646	+		Echvi_1134	0.84	+0.6
1,296,646	+		Echvi_1134	0.84	-1.8
1,296,646	+		Echvi_1134	0.84	-1.9
1,296,647	-		Echvi_1134	0.84	+1.2
1,296,647	-		Echvi_1134	0.84	+0.7
1,296,647	-		Echvi_1134	0.84	-0.4
1,296,647	-		Echvi_1134	0.84	+0.2
1,296,648	+		Echvi_1134	0.84	+0.8
1,296,648	+		Echvi_1134	0.84	-0.3
1,296,649	-		Echvi_1134	0.84	-1.7
1,296,649	-		Echvi_1134	0.84	-1.0
1,296,649	-		Echvi_1134	0.84	-0.1
1,296,649	-		Echvi_1134	0.84	-0.4
1,296,649	-		Echvi_1134	0.84	+0.9
1,296,652	+		Echvi_1134	0.85	-0.3
1,296,653	-		Echvi_1134	0.85	-0.1
1,296,653	-		Echvi_1134	0.85	+0.8
1,296,653	-		Echvi_1134	0.85	+0.4
1,296,653	-		Echvi_1134	0.85	-0.2
1,296,776	+				+0.1
1,296,776	+				+0.1
1,296,777	-				-0.6
1,296,777	-				+0.3
1,296,782	+				+1.3
1,296,812	+				-0.9
1,296,812	+				+0.7
1,296,813	-				+0.1
1,296,813	-				-0.3
1,296,813	-				-0.0
1,296,842	+				+0.5
1,296,866	-		Echvi_1135	0.11	-0.8
1,296,902	+		Echvi_1135	0.16	+0.2
1,296,902	+		Echvi_1135	0.16	-0.3
1,296,903	-		Echvi_1135	0.16	+0.4
1,296,959	+		Echvi_1135	0.23	-0.3
1,296,959	+		Echvi_1135	0.23	-0.3
1,296,959	+		Echvi_1135	0.23	+1.7
1,296,968	+		Echvi_1135	0.24	+0.7
1,297,183	+		Echvi_1135	0.53	-0.6
1,297,206	+		Echvi_1135	0.56	+0.6
1,297,214	+		Echvi_1135	0.57	-0.3
1,297,214	+		Echvi_1135	0.57	-0.2
1,297,251	+		Echvi_1135	0.61	+0.3
1,297,251	+		Echvi_1135	0.61	-0.7
1,297,253	+		Echvi_1135	0.62	-0.5
1,297,253	+		Echvi_1135	0.62	+0.6
1,297,253	+		Echvi_1135	0.62	+1.6
1,297,254	-		Echvi_1135	0.62	+0.1
1,297,254	-		Echvi_1135	0.62	+1.3
1,297,254	-		Echvi_1135	0.62	-0.8
1,297,257	+		Echvi_1135	0.62	+0.4
1,297,257	+		Echvi_1135	0.62	-0.1
1,297,258	-		Echvi_1135	0.62	-1.7
1,297,258	-				+0.9
1,297,258	-		Echvi_1135	0.62	-1.1
1,297,260	+		Echvi_1135	0.63	+3.9
1,297,260	+		Echvi_1135	0.63	+1.3
1,297,261	-		Echvi_1135	0.63	+0.2
1,297,317	+		Echvi_1135	0.70	-0.7
1,297,317	+		Echvi_1135	0.70	-0.5
1,297,317	+		Echvi_1135	0.70	+1.9
1,297,317	+		Echvi_1135	0.70	-1.2
1,297,317	+		Echvi_1135	0.70	-0.7
1,297,318	-		Echvi_1135	0.70	+0.6
1,297,318	-		Echvi_1135	0.70	+0.3
1,297,318	-		Echvi_1135	0.70	-1.2
1,297,318	-		Echvi_1135	0.70	-0.1
1,297,318	-		Echvi_1135	0.70	-0.4
1,297,318	-		Echvi_1135	0.70	+0.9
1,297,330	+		Echvi_1135	0.72	-2.2
1,297,330	+		Echvi_1135	0.72	+0.3
1,297,330	+		Echvi_1135	0.72	-2.1
1,297,330	+		Echvi_1135	0.72	-1.5
1,297,331	-		Echvi_1135	0.72	+0.7
1,297,331	-		Echvi_1135	0.72	+1.3
1,297,337	+		Echvi_1135	0.73	-1.9
1,297,337	+		Echvi_1135	0.73	+0.9
1,297,337	+		Echvi_1135	0.73	+0.2
1,297,338	-		Echvi_1135	0.73	-1.5
1,297,339	+		Echvi_1135	0.73	-0.9
1,297,339	+		Echvi_1135	0.73	-0.7
1,297,339	+		Echvi_1135	0.73	+0.8
1,297,339	+		Echvi_1135	0.73	+0.1
1,297,339	+		Echvi_1135	0.73	+0.1
1,297,340	-		Echvi_1135	0.73	+0.5
1,297,340	-		Echvi_1135	0.73	-0.3
1,297,340	-		Echvi_1135	0.73	+1.0
1,297,359	+		Echvi_1135	0.76	+0.6
1,297,403	+		Echvi_1135	0.81	-0.3
1,297,403	+		Echvi_1135	0.81	+0.5
1,297,460	+		Echvi_1135	0.89	-1.4
1,297,460	+		Echvi_1135	0.89	-1.4
1,297,460	+		Echvi_1135	0.89	-0.5
1,297,505	-				-0.9
1,297,528	+				+1.9
1,297,528	+				+0.3
1,297,529	-				+0.3
1,297,534	+				-1.7
1,297,535	-				-0.5
1,297,559	+				+0.8
1,297,560	-				+0.5
1,297,560	-				-0.1
1,297,568	+				+0.7
1,297,568	+				+1.9
1,297,568	+				-1.5
1,297,576	+				+0.1
1,297,577	-				-0.2
1,297,577	-				+0.7
1,297,589	+				-0.7
1,297,590	-				-0.9
1,297,590	-				+0.1
1,297,630	-				-0.2
1,297,667	+				-1.6
1,297,727	-		Echvi_1136	0.15	+1.9
1,297,885	+		Echvi_1136	0.64	+2.1
1,297,886	-		Echvi_1136	0.65	+0.6
1,297,893	+		Echvi_1136	0.67	+0.6
1,297,954	+		Echvi_1136	0.85	+0.5
1,297,954	+		Echvi_1136	0.85	-0.1
1,297,954	+		Echvi_1136	0.85	+1.0
1,297,956	+		Echvi_1136	0.86	+0.9
1,297,999	-				-0.7
1,297,999	-				-0.2
1,297,999	-				+0.9
1,298,007	-				-0.2
1,298,010	-				+0.4
1,298,010	-				+1.4
1,298,010	-				-0.2
1,298,010	-				+0.3
1,298,038	-				+0.3
1,298,069	+				-0.5
1,298,070	-				-1.8
1,298,070	-				+0.6
1,298,081	+				+0.7
1,298,229	-				+0.4
1,298,277	-		Echvi_1137	0.11	-1.9
1,298,286	+		Echvi_1137	0.11	-0.7
1,298,287	-		Echvi_1137	0.11	+0.1
1,298,287	-		Echvi_1137	0.11	-0.3
1,298,301	-		Echvi_1137	0.12	-0.0
1,298,301	-		Echvi_1137	0.12	+0.3
1,298,305	-		Echvi_1137	0.12	+0.9
1,298,364	-		Echvi_1137	0.16	+0.7
1,298,432	+		Echvi_1137	0.20	+1.3
1,298,432	+		Echvi_1137	0.20	-0.3
1,298,467	+		Echvi_1137	0.22	+2.3
1,298,510	-		Echvi_1137	0.25	-0.2
1,298,517	-		Echvi_1137	0.25	+1.1