Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1021

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
1,182,021	+				-0.3
1,182,021	+				+0.8
1,182,021	+				-2.7
1,182,038	+				-0.4
1,182,038	+				-0.0
1,182,039	-				+0.8
1,182,042	+				+1.8
1,182,062	+				-0.3
1,182,062	+				+1.4
1,182,079	+				+0.5
1,182,098	+				+1.2
1,182,098	+				+0.1
1,182,099	-				-0.6
1,182,099	-				-0.4
1,182,099	-				-0.9
1,182,099	-				-0.4
1,182,142	-				+0.0
1,182,142	-				+0.1
1,182,165	+				-1.5
1,182,166	-				-0.0
1,182,203	+				-0.6
1,182,203	+				-0.1
1,182,204	-				+0.2
1,182,204	-				-0.2
1,182,204	-				-1.3
1,182,205	+				+0.2
1,182,205	+				-0.2
1,182,205	+				+0.2
1,182,205	+				-2.7
1,182,205	+				-0.6
1,182,205	+				-0.6
1,182,205	+				-0.2
1,182,206	-				+0.1
1,182,206	-				+1.0
1,182,206	-				-1.6
1,182,206	-				-1.5
1,182,206	-				-0.6
1,182,206	-				-0.3
1,182,206	-				+0.0
1,182,206	-				+1.3
1,182,206	-				-0.5
1,182,206	-				+0.2
1,182,214	+				+0.8
1,182,214	+				-1.4
1,182,214	+				+0.4
1,182,215	-				+0.2
1,182,215	-				+0.0
1,182,253	+				+0.7
1,182,258	+				+0.8
1,182,258	+				+1.0
1,182,258	+				-1.6
1,182,258	+				+1.0
1,182,259	-				+2.3
1,182,259	-				-0.8
1,182,259	-				+0.7
1,182,259	-				-0.2
1,182,259	-				-0.8
1,182,259	-				+0.7
1,182,259	-				-2.0
1,182,271	-				-2.1
1,182,271	-				+0.1
1,182,280	-				+1.0
1,182,365	+				-0.6
1,182,365	+				-0.5
1,182,375	+				+1.3
1,182,375	+				+0.1
1,182,443	+				+2.1
1,182,444	-				+0.8
1,182,444	-				-0.0
1,182,473	-		Echvi_1020	0.15	+2.2
1,182,578	+		Echvi_1020	0.37	+3.4
1,182,637	-		Echvi_1020	0.49	+2.7
1,182,691	-		Echvi_1020	0.61	+5.1
1,182,856	+				-0.3
1,182,891	+				-0.9
1,182,891	+				+2.0
1,182,891	+				-0.4
1,182,891	+				-1.0
1,182,891	+				-1.2
1,182,892	-				-0.0
1,182,892	-				+0.4
1,182,899	+				+3.6
1,182,899	+				+2.4
1,182,899	+				-2.1
1,182,900	-				-1.3
1,182,900	-				+0.1
1,182,930	-				-0.5
1,182,936	+				-0.3
1,182,937	-				+0.2
1,182,937	-				+0.8
1,182,937	-				+0.2
1,182,937	-				-2.3
1,182,937	-				+0.2
1,182,961	+				-1.5
1,182,962	-				-1.1
1,182,963	+				-1.7
1,183,021	-				+0.2
1,183,035	+				+0.8
1,183,053	+				+0.5
1,183,053	+				-0.3
1,183,053	+				+0.8
1,183,054	-				-1.0
1,183,128	-				+0.8
1,183,132	+				-0.3
1,183,132	+				-0.1
1,183,133	-				+1.9
1,183,154	-		Echvi_1021	0.10	-1.0
1,183,162	+		Echvi_1021	0.11	-0.7
1,183,168	+		Echvi_1021	0.11	+0.6
1,183,169	-		Echvi_1021	0.11	-0.7
1,183,169	-		Echvi_1021	0.11	+0.2
1,183,196	-		Echvi_1021	0.13	-0.5
1,183,196	-		Echvi_1021	0.13	-0.1
1,183,236	+		Echvi_1021	0.16	+0.2
1,183,237	-		Echvi_1021	0.17	+0.8
1,183,237	-		Echvi_1021	0.17	+0.6
1,183,363	+		Echvi_1021	0.26	-1.6
1,183,412	-		Echvi_1021	0.30	-0.3
1,183,565	+		Echvi_1021	0.41	-0.7
1,183,566	-		Echvi_1021	0.41	-1.1
1,183,566	-		Echvi_1021	0.41	-0.4
1,183,566	-		Echvi_1021	0.41	-0.8
1,183,607	+		Echvi_1021	0.45	-0.4
1,183,607	+		Echvi_1021	0.45	-1.2
1,183,607	+		Echvi_1021	0.45	-0.4
1,183,608	-		Echvi_1021	0.45	-1.5
1,183,618	+		Echvi_1021	0.45	-0.6
1,183,620	+		Echvi_1021	0.46	-0.2
1,183,620	+		Echvi_1021	0.46	+0.2
1,183,620	+		Echvi_1021	0.46	-1.5
1,183,621	-		Echvi_1021	0.46	-0.6
1,183,711	+		Echvi_1021	0.52	+0.2
1,183,711	+		Echvi_1021	0.52	-0.8
1,183,711	+		Echvi_1021	0.52	-0.3
1,183,712	-		Echvi_1021	0.53	-0.7
1,183,712	-		Echvi_1021	0.53	-0.6
1,183,718	-		Echvi_1021	0.53	-0.5
1,183,742	+		Echvi_1021	0.55	+0.4
1,183,742	+		Echvi_1021	0.55	-0.5
1,183,743	-		Echvi_1021	0.55	-0.1
1,183,743	-		Echvi_1021	0.55	+1.8
1,183,743	-		Echvi_1021	0.55	-1.4
1,183,792	+		Echvi_1021	0.59	-0.4
1,183,834	+		Echvi_1021	0.62	-0.3
1,183,835	-		Echvi_1021	0.62	+0.6
1,183,835	-		Echvi_1021	0.62	-0.0
1,183,835	-		Echvi_1021	0.62	+1.0
1,183,879	+		Echvi_1021	0.65	+0.5
1,183,880	-		Echvi_1021	0.65	+0.3
1,183,880	-		Echvi_1021	0.65	-1.7
1,183,882	-		Echvi_1021	0.65	-1.8
1,183,902	+		Echvi_1021	0.67	-0.7
1,183,902	+		Echvi_1021	0.67	+0.2
1,183,902	+		Echvi_1021	0.67	+0.7
1,183,902	+		Echvi_1021	0.67	+0.1
1,183,902	+		Echvi_1021	0.67	-0.1
1,183,903	-		Echvi_1021	0.67	-0.3
1,183,903	-		Echvi_1021	0.67	-2.5
1,183,903	-		Echvi_1021	0.67	+1.1
1,183,904	+		Echvi_1021	0.67	-0.9
1,183,904	+		Echvi_1021	0.67	-0.8
1,183,904	+		Echvi_1021	0.67	-1.3
1,183,904	+		Echvi_1021	0.67	+1.0
1,183,904	+		Echvi_1021	0.67	-0.3
1,183,904	+		Echvi_1021	0.67	+3.6
1,183,904	+		Echvi_1021	0.67	+0.1
1,183,904	+		Echvi_1021	0.67	+1.6
1,183,905	-		Echvi_1021	0.67	+0.4
1,183,905	-		Echvi_1021	0.67	-0.4
1,183,905	-		Echvi_1021	0.67	-1.0
1,183,905	-		Echvi_1021	0.67	-0.4
1,183,905	-		Echvi_1021	0.67	-1.6
1,183,905	-		Echvi_1021	0.67	-0.3
1,183,905	-		Echvi_1021	0.67	-1.1
1,183,921	+		Echvi_1021	0.68	-0.8
1,183,921	+		Echvi_1021	0.68	+0.4
1,183,921	+		Echvi_1021	0.68	+1.0
1,184,019	+		Echvi_1021	0.76	-0.9
1,184,019	+		Echvi_1021	0.76	-0.0
1,184,094	+		Echvi_1021	0.81	-0.8
1,184,094	+		Echvi_1021	0.81	-0.2
1,184,094	+		Echvi_1021	0.81	-0.4
1,184,095	-		Echvi_1021	0.82	+0.3
1,184,157	+		Echvi_1021	0.86	+0.1
1,184,342	+				+1.0
1,184,343	-				+2.7
1,184,353	-				-0.3
1,184,356	-				+0.4
1,184,358	+				+0.3
1,184,365	-				-0.4
1,184,387	-				-0.2
1,184,393	-				+0.5
1,184,405	+				+0.4
1,184,443	+				+1.1
1,184,443	+				+1.4
1,184,444	-				+1.4
1,184,452	+				+0.6
1,184,501	+				+1.9
1,184,501	+				+0.7
1,184,507	-				+0.3
1,184,556	+		Echvi_1022	0.13	+1.2
1,184,556	+		Echvi_1022	0.13	-0.4
1,184,564	+		Echvi_1022	0.14	+1.3
1,184,564	+		Echvi_1022	0.14	-0.4
1,184,599	+		Echvi_1022	0.18	+1.7
1,184,653	+		Echvi_1022	0.23	+0.5
1,184,680	+		Echvi_1022	0.25	+1.0
1,184,681	-		Echvi_1022	0.25	+0.3
1,184,698	-		Echvi_1022	0.27	+1.3
1,184,698	-		Echvi_1022	0.27	+1.6
1,184,698	-		Echvi_1022	0.27	+1.3
1,184,698	-		Echvi_1022	0.27	+0.7
1,184,760	+		Echvi_1022	0.33	-0.1
1,184,760	+		Echvi_1022	0.33	+2.0
1,184,760	+		Echvi_1022	0.33	+1.4
1,184,760	+		Echvi_1022	0.33	+1.8
1,184,760	+		Echvi_1022	0.33	+0.2
1,184,761	-		Echvi_1022	0.33	-0.3
1,184,761	-		Echvi_1022	0.33	+2.6
1,184,761	-		Echvi_1022	0.33	+2.3
1,184,761	-		Echvi_1022	0.33	+1.3
1,184,761	-		Echvi_1022	0.33	+1.0
1,184,782	-		Echvi_1022	0.35	+0.7
1,184,790	-		Echvi_1022	0.36	+1.6
1,184,821	+		Echvi_1022	0.39	+0.8
1,184,830	+		Echvi_1022	0.40	+1.2
1,184,891	-		Echvi_1022	0.46	+2.5
1,184,912	-		Echvi_1022	0.48	+0.9
1,184,982	-		Echvi_1022	0.54	+0.2
1,184,984	+		Echvi_1022	0.55	+0.7
1,184,984	+		Echvi_1022	0.55	+1.4
1,184,985	-		Echvi_1022	0.55	+1.1
1,184,985	-		Echvi_1022	0.55	+2.3
1,184,985	-		Echvi_1022	0.55	+1.9
1,184,985	-		Echvi_1022	0.55	+1.0
1,185,065	-		Echvi_1022	0.62	+1.6
1,185,097	+		Echvi_1022	0.66	+2.0
1,185,098	-		Echvi_1022	0.66	+1.5
1,185,098	-		Echvi_1022	0.66	+2.1
1,185,186	+		Echvi_1022	0.74	+0.5
1,185,186	+		Echvi_1022	0.74	+1.0
1,185,186	+		Echvi_1022	0.74	-0.9
1,185,187	-		Echvi_1022	0.74	+1.0
1,185,302	+		Echvi_1022	0.85	+2.2
1,185,303	-		Echvi_1022	0.85	+1.5
1,185,303	-		Echvi_1022	0.85	+0.8