Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1004

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
1,161,933	+		Echvi_1003	0.14	+2.6
1,161,934	-		Echvi_1003	0.14	+0.5
1,161,936	-		Echvi_1003	0.15	-0.1
1,161,941	+		Echvi_1003	0.15	-0.5
1,161,941	+		Echvi_1003	0.15	-0.5
1,161,941	+		Echvi_1003	0.15	+0.4
1,161,941	+		Echvi_1003	0.15	-1.5
1,161,941	+		Echvi_1003	0.15	+0.6
1,161,942	-		Echvi_1003	0.15	-1.9
1,161,961	+		Echvi_1003	0.17	-1.3
1,161,961	+		Echvi_1003	0.17	+0.7
1,161,961	+		Echvi_1003	0.17	-1.9
1,161,981	-		Echvi_1003	0.19	+0.8
1,161,985	+		Echvi_1003	0.19	-1.8
1,161,986	-		Echvi_1003	0.19	+0.3
1,161,986	-		Echvi_1003	0.19	+2.6
1,162,044	-		Echvi_1003	0.25	-0.9
1,162,111	+		Echvi_1003	0.31	-0.1
1,162,111	+		Echvi_1003	0.31	-1.1
1,162,111	+		Echvi_1003	0.31	+0.6
1,162,111	+		Echvi_1003	0.31	+0.7
1,162,112	-		Echvi_1003	0.31	-1.3
1,162,112	-		Echvi_1003	0.31	-0.3
1,162,112	-		Echvi_1003	0.31	-0.1
1,162,112	-		Echvi_1003	0.31	-1.5
1,162,112	-		Echvi_1003	0.31	-1.2
1,162,198	+		Echvi_1003	0.40	-2.2
1,162,256	-		Echvi_1003	0.45	-2.2
1,162,256	-		Echvi_1003	0.45	-1.8
1,162,270	-		Echvi_1003	0.47	-0.5
1,162,288	+		Echvi_1003	0.48	+1.0
1,162,289	-		Echvi_1003	0.48	-0.1
1,162,355	-		Echvi_1003	0.55	+1.4
1,162,427	-		Echvi_1003	0.62	-1.0
1,162,440	+		Echvi_1003	0.63	-1.2
1,162,506	-		Echvi_1003	0.69	+2.0
1,162,566	-		Echvi_1003	0.75	+0.2
1,162,570	+		Echvi_1003	0.75	+1.2
1,162,587	+		Echvi_1003	0.77	-0.1
1,162,587	+		Echvi_1003	0.77	+0.7
1,162,588	-		Echvi_1003	0.77	-1.1
1,162,627	+		Echvi_1003	0.81	-0.6
1,162,628	-		Echvi_1003	0.81	-0.8
1,162,754	+				-1.3
1,162,803	+				-0.5
1,162,889	+				-1.3
1,162,906	-				-1.3
1,162,909	-				+0.6
1,162,924	-				-1.1
1,162,933	+				-1.1
1,162,947	+				-0.0
1,162,982	-				-1.6
1,162,984	+				-0.9
1,162,984	+				-1.4
1,162,984	+				+0.2
1,163,032	+				-0.7
1,163,033	-				-1.8
1,163,036	+				-0.0
1,163,036	+				+2.0
1,163,036	+				-0.2
1,163,036	+				-0.9
1,163,037	-				-0.1
1,163,037	-				-1.7
1,163,039	-				-0.0
1,163,044	+				+0.0
1,163,044	+				-1.7
1,163,059	+				+1.0
1,163,059	+				-0.9
1,163,059	+				+1.1
1,163,059	+				-0.5
1,163,059	+				-0.5
1,163,059	+				+0.4
1,163,059	+				+0.3
1,163,059	+				-1.9
1,163,060	-				-0.2
1,163,060	-				-1.0
1,163,060	-				+0.0
1,163,060	-				+0.4
1,163,060	-				+0.9
1,163,060	-				-0.9
1,163,064	+				-0.2
1,163,065	-				-0.9
1,163,065	-				-0.2
1,163,065	-				-0.9
1,163,082	+				-1.0
1,163,083	-				+0.4
1,163,129	+				-0.9
1,163,132	-				-1.2
1,163,201	-		Echvi_1004	0.11	+1.6
1,163,215	+		Echvi_1004	0.12	-1.4
1,163,215	+		Echvi_1004	0.12	-0.6
1,163,215	+		Echvi_1004	0.12	+1.2
1,163,215	+		Echvi_1004	0.12	-0.6
1,163,216	-		Echvi_1004	0.12	-0.0
1,163,216	-		Echvi_1004	0.12	-1.2
1,163,277	+		Echvi_1004	0.14	-0.3
1,163,278	-		Echvi_1004	0.14	-1.3
1,163,351	-		Echvi_1004	0.18	+0.2
1,163,363	-		Echvi_1004	0.18	+0.1
1,163,369	+		Echvi_1004	0.18	-0.4
1,163,384	+		Echvi_1004	0.19	-1.7
1,163,400	+		Echvi_1004	0.20	-0.9
1,163,401	-		Echvi_1004	0.20	-1.2
1,163,401	-		Echvi_1004	0.20	-1.8
1,163,402	+		Echvi_1004	0.20	-0.4
1,163,402	+		Echvi_1004	0.20	+0.8
1,163,403	-		Echvi_1004	0.20	-0.1
1,163,423	+		Echvi_1004	0.21	-0.5
1,163,494	+		Echvi_1004	0.24	-1.1
1,163,494	+		Echvi_1004	0.24	+0.1
1,163,495	-		Echvi_1004	0.24	-0.8
1,163,510	+		Echvi_1004	0.24	-0.3
1,163,541	-		Echvi_1004	0.26	-0.2
1,163,543	-		Echvi_1004	0.26	+0.8
1,163,543	-		Echvi_1004	0.26	+0.4
1,163,551	+		Echvi_1004	0.26	+0.6
1,163,552	-		Echvi_1004	0.26	-1.2
1,163,569	+		Echvi_1004	0.27	-0.0
1,163,569	+		Echvi_1004	0.27	+1.0
1,163,573	+		Echvi_1004	0.27	+0.9
1,163,573	+		Echvi_1004	0.27	+0.3
1,163,574	-		Echvi_1004	0.27	-0.7
1,163,574	-		Echvi_1004	0.27	+1.6
1,163,574	-		Echvi_1004	0.27	+0.3
1,163,574	-		Echvi_1004	0.27	+0.0
1,163,574	-		Echvi_1004	0.27	+0.4
1,163,612	+		Echvi_1004	0.28	+1.0
1,163,612	+		Echvi_1004	0.28	-0.3
1,163,612	+		Echvi_1004	0.28	+0.2
1,163,613	-		Echvi_1004	0.29	-1.0
1,163,645	+		Echvi_1004	0.30	+0.1
1,163,645	+		Echvi_1004	0.30	-0.2
1,163,695	+		Echvi_1004	0.32	+1.6
1,163,695	+		Echvi_1004	0.32	-1.6
1,163,696	-		Echvi_1004	0.32	+0.4
1,163,696	-		Echvi_1004	0.32	-0.3
1,163,732	-		Echvi_1004	0.34	+0.3
1,163,732	-		Echvi_1004	0.34	+0.1
1,163,735	+		Echvi_1004	0.34	-0.1
1,163,735	+		Echvi_1004	0.34	+0.6
1,163,735	+		Echvi_1004	0.34	-0.6
1,163,736	-		Echvi_1004	0.34	-0.3
1,163,764	+		Echvi_1004	0.35	-1.3
1,163,764	+		Echvi_1004	0.35	-2.0
1,163,764	+		Echvi_1004	0.35	+1.3
1,163,765	-		Echvi_1004	0.35	+0.3
1,163,765	-		Echvi_1004	0.35	+0.3
1,163,810	+		Echvi_1004	0.37	-0.1
1,163,810	+		Echvi_1004	0.37	+0.6
1,163,811	-		Echvi_1004	0.37	-2.3
1,163,838	+		Echvi_1004	0.38	-0.8
1,163,839	-		Echvi_1004	0.38	-2.7
1,163,839	-		Echvi_1004	0.38	+0.3
1,163,839	-		Echvi_1004	0.38	-0.9
1,163,839	-		Echvi_1004	0.38	+0.4
1,163,839	-		Echvi_1004	0.38	-0.5
1,163,854	+		Echvi_1004	0.39	+1.1
1,163,868	+		Echvi_1004	0.39	+1.5
1,163,869	-		Echvi_1004	0.39	-1.6
1,163,869	-		Echvi_1004	0.39	-0.0
1,163,875	+		Echvi_1004	0.39	-0.3
1,163,875	+		Echvi_1004	0.39	+0.2
1,163,876	-		Echvi_1004	0.40	-0.6
1,163,876	-		Echvi_1004	0.40	-0.6
1,163,876	-		Echvi_1004	0.40	-0.2
1,163,890	+		Echvi_1004	0.40	-0.4
1,163,894	+		Echvi_1004	0.40	-0.5
1,163,895	-		Echvi_1004	0.40	+0.7
1,163,910	+		Echvi_1004	0.41	-1.7
1,163,910	+		Echvi_1004	0.41	-0.2
1,163,911	-		Echvi_1004	0.41	+0.5
1,163,999	-		Echvi_1004	0.45	-2.3
1,164,052	+		Echvi_1004	0.47	+1.2
1,164,052	+		Echvi_1004	0.47	-0.5
1,164,053	-		Echvi_1004	0.47	-0.7
1,164,053	-		Echvi_1004	0.47	+1.2
1,164,053	-		Echvi_1004	0.47	-0.6
1,164,053	-		Echvi_1004	0.47	-0.9
1,164,110	+		Echvi_1004	0.49	-0.6
1,164,160	+		Echvi_1004	0.51	-1.2
1,164,161	-		Echvi_1004	0.51	-0.6
1,164,161	-		Echvi_1004	0.51	-0.3
1,164,161	-		Echvi_1004	0.51	+0.1
1,164,169	+		Echvi_1004	0.52	-0.5
1,164,170	-		Echvi_1004	0.52	+0.3
1,164,196	+		Echvi_1004	0.53	-0.6
1,164,196	+		Echvi_1004	0.53	-0.4
1,164,197	-		Echvi_1004	0.53	-0.9
1,164,197	-		Echvi_1004	0.53	+0.3
1,164,200	-		Echvi_1004	0.53	-1.2
1,164,212	-		Echvi_1004	0.54	-0.3
1,164,212	-		Echvi_1004	0.54	-0.8
1,164,215	+		Echvi_1004	0.54	-2.3
1,164,215	+		Echvi_1004	0.54	-1.1
1,164,215	+		Echvi_1004	0.54	+2.7
1,164,215	+		Echvi_1004	0.54	-0.1
1,164,215	+		Echvi_1004	0.54	-1.9
1,164,215	+		Echvi_1004	0.54	-1.2
1,164,216	-		Echvi_1004	0.54	-0.0
1,164,216	-		Echvi_1004	0.54	-2.2
1,164,217	+		Echvi_1004	0.54	+0.7
1,164,217	+		Echvi_1004	0.54	-2.2
1,164,217	+		Echvi_1004	0.54	-1.7
1,164,218	-		Echvi_1004	0.54	-0.3
1,164,263	+		Echvi_1004	0.56	-0.5
1,164,264	-		Echvi_1004	0.56	+0.8
1,164,265	+		Echvi_1004	0.56	-2.5
1,164,266	-		Echvi_1004	0.56	+0.5
1,164,266	-		Echvi_1004	0.56	+4.0
1,164,269	+		Echvi_1004	0.56	+0.8
1,164,269	+		Echvi_1004	0.56	-0.2
1,164,270	-		Echvi_1004	0.56	+0.4
1,164,277	+		Echvi_1004	0.56	+1.5
1,164,292	+		Echvi_1004	0.57	-0.5
1,164,293	-		Echvi_1004	0.57	+0.2
1,164,297	-		Echvi_1004	0.57	-1.1
1,164,297	-		Echvi_1004	0.57	+0.5
1,164,313	+		Echvi_1004	0.58	+1.8
1,164,313	+		Echvi_1004	0.58	-0.9
1,164,313	+		Echvi_1004	0.58	+0.4
1,164,314	-		Echvi_1004	0.58	-0.6
1,164,314	-		Echvi_1004	0.58	+1.3
1,164,314	-		Echvi_1004	0.58	+0.6
1,164,319	+		Echvi_1004	0.58	-2.4
1,164,322	+		Echvi_1004	0.58	-0.4
1,164,351	-		Echvi_1004	0.59	+0.2
1,164,379	+		Echvi_1004	0.61	+0.9
1,164,379	+		Echvi_1004	0.61	-0.9
1,164,434	-		Echvi_1004	0.63	+0.4
1,164,437	-		Echvi_1004	0.63	-1.0
1,164,462	+		Echvi_1004	0.64	+0.2
1,164,487	+		Echvi_1004	0.65	-0.9
1,164,487	+		Echvi_1004	0.65	+0.3
1,164,488	-		Echvi_1004	0.65	+0.0
1,164,488	-		Echvi_1004	0.65	+1.2
1,164,613	+		Echvi_1004	0.70	+1.0
1,164,740	+		Echvi_1004	0.76	+0.1
1,164,741	-		Echvi_1004	0.76	-1.2
1,164,827	+		Echvi_1004	0.79	+2.0
1,164,843	-		Echvi_1004	0.80	-0.6
1,164,890	+		Echvi_1004	0.82	+0.0
1,164,891	-		Echvi_1004	0.82	-0.6
1,164,897	-		Echvi_1004	0.82	-1.1
1,164,938	+		Echvi_1004	0.84	-1.7
1,164,939	-		Echvi_1004	0.84	+0.7
1,164,965	+		Echvi_1004	0.85	+0.4
1,165,068	+		Echvi_1004	0.89	-0.3
1,165,068	+		Echvi_1004	0.89	+1.4
1,165,068	+		Echvi_1004	0.89	+0.4
1,165,068	+		Echvi_1004	0.89	-1.8
1,165,068	+		Echvi_1004	0.89	-1.6
1,165,069	-		Echvi_1004	0.89	-1.4
1,165,069	-		Echvi_1004	0.89	+0.1
1,165,069	-		Echvi_1004	0.89	-1.0
1,165,069	-		Echvi_1004	0.89	-1.0
1,165,069	-		Echvi_1004	0.89	-0.2
1,165,077	+		Echvi_1004	0.90	-0.3
1,165,077	+		Echvi_1004	0.90	-1.6
1,165,077	+		Echvi_1004	0.90	+0.5
1,165,077	+		Echvi_1004	0.90	+0.7
1,165,078	-		Echvi_1004	0.90	-0.3
1,165,091	-				+0.2
1,165,099	+				-0.4
1,165,100	-				+1.1
1,165,118	-				-0.6
1,165,118	-				-0.6
1,165,145	+				-0.6
1,165,146	-				-0.3
1,165,152	-				-0.5
1,165,152	-				-0.2
1,165,250	+				-0.8
1,165,268	+				-0.2
1,165,269	-				+0.3
1,165,334	-				-0.3
1,165,343	-				+0.2
1,165,374	+				-1.5
1,165,400	-				-1.5
1,165,446	+				-0.9
1,165,446	+				-0.5
1,165,446	+				-2.3
1,165,447	-				+0.1
1,165,447	-				+0.8
1,165,449	+				-1.4
1,165,449	+				-0.1
1,165,449	+				-0.8
1,165,449	+				-1.1
1,165,449	+				-1.1
1,165,450	-				-0.3
1,165,487	+				-0.3
1,165,514	+				-0.9
1,165,546	+				-0.8
1,165,547	-				+3.0
1,165,547	-				-0.1
1,165,547	-				-0.6
1,165,558	+				-0.2
1,165,558	+				-0.6
1,165,558	+				-1.1
1,165,558	+				-1.0
1,165,559	-				-0.6
1,165,654	+				-1.1
1,165,654	+				-1.8
1,165,655	-				-0.9
1,165,655	-				-0.0
1,165,657	+				+0.6
1,165,658	-				-0.8
1,165,662	+				-2.3
1,165,662	+				-1.0
1,165,662	+				+0.1
1,165,663	-				+0.0
1,165,663	-				-1.0
1,165,685	+				+2.0
1,165,686	-				+0.4
1,165,692	+				-0.9
1,165,701	+				-0.6
1,165,702	-				+0.7
1,165,702	-				-0.0
1,165,711	+				-1.0
1,165,713	+				-0.0
1,165,723	-				+0.1
1,165,723	-				+0.5
1,165,733	+				-0.7
1,165,736	+				-1.0
1,165,790	+				-0.9
1,165,790	+				-0.7
1,165,791	-				+0.7
1,165,791	-				-1.0
1,165,791	-				+0.3
1,165,795	-				-1.4
1,165,799	+				-1.6
1,165,800	-				-0.3
1,165,811	+				-1.5
1,165,811	+				-0.7
1,165,812	-				+0.1
1,165,823	+				+0.1
1,165,830	+				-0.5
1,165,830	+				-1.5
1,165,830	+				+0.2
1,165,831	-				+0.7
1,165,991	-		Echvi_1005	0.24	-0.3
1,166,001	-		Echvi_1005	0.25	+0.8
1,166,001	-		Echvi_1005	0.25	+2.3
1,166,007	-		Echvi_1005	0.26	+0.3
1,166,062	-		Echvi_1005	0.33	+1.0
1,166,135	+		Echvi_1005	0.42	-2.4
1,166,135	+		Echvi_1005	0.42	-0.3
1,166,135	+				+2.0
1,166,136	-		Echvi_1005	0.42	-1.5
1,166,136	-		Echvi_1005	0.42	-0.0
1,166,152	+		Echvi_1005	0.44	-3.2
1,166,152	+		Echvi_1005	0.44	-2.7
1,166,153	-		Echvi_1005	0.44	+1.0
1,166,153	-		Echvi_1005	0.44	+0.5
1,166,153	-		Echvi_1005	0.44	-0.8
1,166,153	-		Echvi_1005	0.44	+0.5
1,166,153	-		Echvi_1005	0.44	+2.0
1,166,173	-		Echvi_1005	0.47	+2.0
1,166,206	+		Echvi_1005	0.51	-1.3
1,166,207	-		Echvi_1005	0.51	-0.3
1,166,209	-		Echvi_1005	0.51	-2.1
1,166,209	-		Echvi_1005	0.51	+0.6
1,166,209	-		Echvi_1005	0.51	-2.2
1,166,259	+		Echvi_1005	0.57	-1.2
1,166,259	+		Echvi_1005	0.57	-2.0
1,166,260	-		Echvi_1005	0.57	-0.1
1,166,260	-		Echvi_1005	0.57	-0.3
1,166,260	-		Echvi_1005	0.57	-0.8