Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_0976

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
1,127,221	+		Echvi_0975	0.37	-0.4
1,127,221	+		Echvi_0975	0.37	-1.1
1,127,221	+		Echvi_0975	0.37	-1.2
1,127,221	+		Echvi_0975	0.37	-0.9
1,127,221	+		Echvi_0975	0.37	+2.2
1,127,225	+		Echvi_0975	0.37	+0.2
1,127,225	+		Echvi_0975	0.37	-1.5
1,127,225	+		Echvi_0975	0.37	-1.3
1,127,225	+		Echvi_0975	0.37	+0.3
1,127,226	-		Echvi_0975	0.37	+0.7
1,127,226	-		Echvi_0975	0.37	+0.0
1,127,226	-		Echvi_0975	0.37	-0.4
1,127,226	-		Echvi_0975	0.37	+0.9
1,127,365	+		Echvi_0975	0.47	-0.8
1,127,365	+		Echvi_0975	0.47	+1.2
1,127,552	-		Echvi_0975	0.61	-0.5
1,127,589	-		Echvi_0975	0.64	-0.6
1,127,806	-		Echvi_0975	0.79	-0.3
1,127,843	+		Echvi_0975	0.82	-0.3
1,127,863	-		Echvi_0975	0.84	+0.1
1,127,902	-		Echvi_0975	0.86	+1.6
1,127,902	-		Echvi_0975	0.86	-0.7
1,127,912	+		Echvi_0975	0.87	-1.5
1,127,940	-		Echvi_0975	0.89	+0.4
1,127,944	+		Echvi_0975	0.89	-0.7
1,127,945	-		Echvi_0975	0.90	+1.6
1,127,945	-		Echvi_0975	0.90	+0.6
1,127,945	-		Echvi_0975	0.90	+0.4
1,127,948	-		Echvi_0975	0.90	-0.2
1,127,956	+				-0.6
1,127,956	+				+0.1
1,127,956	+				+0.6
1,127,957	-				+0.7
1,127,957	-				-0.3
1,127,957	-				-1.1
1,127,962	-				-1.0
1,127,978	+				-0.6
1,127,978	+				-0.9
1,127,979	-				-0.2
1,127,987	-				+0.2
1,128,026	+				-0.1
1,128,027	-				-1.3
1,128,037	+				-0.3
1,128,038	-				+0.1
1,128,101	+				-2.3
1,128,101	+				+1.0
1,128,113	+				+0.7
1,128,188	-				-0.6
1,128,188	-				-0.5
1,128,228	+				+0.7
1,128,308	+				+0.9
1,128,365	-				-1.2
1,128,612	+		Echvi_0976	0.16	-1.3
1,128,612	+		Echvi_0976	0.16	+0.4
1,128,612	+		Echvi_0976	0.16	+0.6
1,128,612	+		Echvi_0976	0.16	+1.0
1,128,613	-		Echvi_0976	0.17	-0.8
1,128,613	-		Echvi_0976	0.17	+1.0
1,128,613	-		Echvi_0976	0.17	-0.8
1,128,613	-		Echvi_0976	0.17	+0.8
1,128,615	-		Echvi_0976	0.17	-1.0
1,128,707	+		Echvi_0976	0.20	+1.1
1,128,708	-		Echvi_0976	0.20	+2.1
1,128,748	-		Echvi_0976	0.22	+0.4
1,128,812	+		Echvi_0976	0.24	-0.0
1,128,813	-		Echvi_0976	0.24	+1.0
1,128,813	-		Echvi_0976	0.24	-2.3
1,128,951	+		Echvi_0976	0.30	-1.5
1,128,959	+		Echvi_0976	0.30	+1.4
1,128,959	+		Echvi_0976	0.30	-0.2
1,128,960	-		Echvi_0976	0.30	+0.0
1,129,023	-		Echvi_0976	0.33	+0.2
1,129,059	+		Echvi_0976	0.34	-0.9
1,129,060	-		Echvi_0976	0.34	+0.5
1,129,257	+		Echvi_0976	0.42	-0.1
1,129,257	+		Echvi_0976	0.42	-1.7
1,129,257	+		Echvi_0976	0.42	-1.3
1,129,258	-		Echvi_0976	0.42	-0.7
1,129,369	+		Echvi_0976	0.46	+0.3
1,129,369	+		Echvi_0976	0.46	-1.1
1,129,369	+		Echvi_0976	0.46	-0.0
1,129,369	+		Echvi_0976	0.46	-0.4
1,129,369	+		Echvi_0976	0.46	-0.5
1,129,370	-		Echvi_0976	0.46	+0.9
1,129,370	-		Echvi_0976	0.46	-0.8
1,129,370	-		Echvi_0976	0.46	-1.2
1,129,370	-		Echvi_0976	0.46	+0.3
1,129,370	-		Echvi_0976	0.46	+0.1
1,129,382	+		Echvi_0976	0.47	-1.2
1,129,401	-		Echvi_0976	0.48	-2.3
1,129,469	-		Echvi_0976	0.50	-0.5
1,129,472	+		Echvi_0976	0.51	+0.2
1,129,472	+		Echvi_0976	0.51	+0.5
1,129,472	+		Echvi_0976	0.51	-0.2
1,129,472	+		Echvi_0976	0.51	+0.7
1,129,472	+		Echvi_0976	0.51	-2.2
1,129,473	-		Echvi_0976	0.51	+0.1
1,129,473	-		Echvi_0976	0.51	-0.7
1,129,473	-		Echvi_0976	0.51	+0.2
1,129,485	-		Echvi_0976	0.51	+1.8
1,129,498	-		Echvi_0976	0.52	-0.6
1,129,632	+		Echvi_0976	0.57	-0.5
1,129,632	+		Echvi_0976	0.57	+0.2
1,129,633	-		Echvi_0976	0.57	-3.1
1,129,634	+		Echvi_0976	0.57	-1.4
1,129,635	-		Echvi_0976	0.57	+2.4
1,129,635	-		Echvi_0976	0.57	+0.1
1,129,648	+		Echvi_0976	0.57	-0.0
1,129,648	+		Echvi_0976	0.57	-0.4
1,129,648	+		Echvi_0976	0.57	-2.0
1,129,648	+		Echvi_0976	0.57	+0.3
1,129,648	+		Echvi_0976	0.57	-1.9
1,129,659	-		Echvi_0976	0.58	+0.1
1,129,757	+		Echvi_0976	0.62	-0.8
1,129,758	-		Echvi_0976	0.62	-0.1
1,129,758	-		Echvi_0976	0.62	-0.8
1,129,758	-		Echvi_0976	0.62	-1.0
1,129,837	-		Echvi_0976	0.65	-0.1
1,129,895	+		Echvi_0976	0.67	+0.7
1,129,901	+		Echvi_0976	0.67	-1.2
1,129,915	-		Echvi_0976	0.68	-0.9
1,129,959	+		Echvi_0976	0.70	-1.5
1,129,972	+		Echvi_0976	0.70	-0.6
1,129,972	+		Echvi_0976	0.70	+0.5
1,130,018	+		Echvi_0976	0.72	-1.2
1,130,047	+		Echvi_0976	0.73	+0.8
1,130,088	-		Echvi_0976	0.75	-0.3
1,130,169	+		Echvi_0976	0.78	+0.1
1,130,231	+		Echvi_0976	0.81	-0.9
1,130,232	-		Echvi_0976	0.81	-1.1
1,130,234	+		Echvi_0976	0.81	+0.3
1,130,235	-		Echvi_0976	0.81	-2.1
1,130,258	+		Echvi_0976	0.82	-0.8
1,130,330	+		Echvi_0976	0.84	+1.0
1,130,330	+		Echvi_0976	0.84	-2.6
1,130,330	+		Echvi_0976	0.84	-1.5
1,130,331	-		Echvi_0976	0.85	-0.1
1,130,331	-		Echvi_0976	0.85	-1.5
1,130,354	-		Echvi_0976	0.85	-0.4
1,130,354	-		Echvi_0976	0.85	-0.0
1,130,525	-				+1.2
1,130,644	-				-0.7
1,130,644	-				-0.5
1,130,644	-				-1.0
1,130,644	-				-1.2
1,130,644	-				+0.3
1,130,650	+				-0.2
1,130,651	-				-1.1
1,130,729	-				-0.3
1,130,729	-				-1.0
1,130,743	+				+0.7
1,130,751	-				-0.6
1,130,756	+				-0.6
1,130,774	-				-1.0
1,130,774	-				-0.8
1,130,774	-				-1.6
1,130,775	+				-0.3
1,130,776	-				-0.0
1,130,829	-				-0.8
1,130,851	-				+1.2
1,130,851	-				-1.5
1,130,921	+				-1.0
1,130,922	-				-0.2
1,130,922	-				-1.3
1,130,935	-				-0.8
1,130,944	+				+0.6
1,130,956	-				-2.5
1,130,971	-				-0.8
1,130,978	+				+0.8
1,130,979	-				+0.7
1,131,043	+				-0.6
1,131,043	+				+0.2
1,131,056	+				+1.3
1,131,058	+				+1.2
1,131,059	-				+0.3
1,131,066	+				-1.1
1,131,119	+				-0.4
1,131,146	+				+0.1
1,131,146	+				-1.7
1,131,146	+				+0.1
1,131,146	+				-0.9
1,131,147	-				+1.4
1,131,148	+				-0.6
1,131,148	+				+0.4
1,131,148	+				+0.1
1,131,148	+				+0.5
1,131,148	+				-0.2
1,131,148	+				-0.0
1,131,149	-				-1.1
1,131,149	-				+0.6
1,131,152	+				-1.0
1,131,153	-				+0.6
1,131,153	-				+1.6
1,131,154	+				-1.5
1,131,154	+				-1.8
1,131,155	-				+0.4
1,131,170	-				-0.3
1,131,238	+		Echvi_0977	0.12	-0.5
1,131,239	-		Echvi_0977	0.12	-0.2
1,131,245	-		Echvi_0977	0.13	+1.0
1,131,245	-		Echvi_0977	0.13	+0.7
1,131,245	-		Echvi_0977	0.13	+0.6
1,131,283	+		Echvi_0977	0.15	-0.2
1,131,284	-		Echvi_0977	0.15	+0.4
1,131,332	+		Echvi_0977	0.18	-2.0
1,131,388	+		Echvi_0977	0.22	+0.5
1,131,388	+		Echvi_0977	0.22	-0.8
1,131,389	-		Echvi_0977	0.22	-0.0
1,131,389	-		Echvi_0977	0.22	+0.2
1,131,397	+		Echvi_0977	0.23	-0.1
1,131,397	+		Echvi_0977	0.23	+0.7
1,131,418	+		Echvi_0977	0.24	+2.2
1,131,419	-		Echvi_0977	0.24	-2.5
1,131,451	+		Echvi_0977	0.27	+0.8
1,131,451	+		Echvi_0977	0.27	-0.7
1,131,452	-		Echvi_0977	0.27	-2.3
1,131,452	-		Echvi_0977	0.27	-0.5
1,131,452	-		Echvi_0977	0.27	+0.3
1,131,504	+		Echvi_0977	0.30	-0.8
1,131,524	-		Echvi_0977	0.32	+1.6
1,131,528	+		Echvi_0977	0.32	-0.2
1,131,536	+		Echvi_0977	0.32	+0.5
1,131,537	-		Echvi_0977	0.32	-0.0
1,131,538	+		Echvi_0977	0.32	+0.8
1,131,538	+		Echvi_0977	0.32	-1.5
1,131,538	+		Echvi_0977	0.32	-0.8
1,131,538	+		Echvi_0977	0.32	+0.6
1,131,538	+		Echvi_0977	0.32	+1.0
1,131,538	+		Echvi_0977	0.32	-1.0
1,131,538	+		Echvi_0977	0.32	-0.5
1,131,539	-		Echvi_0977	0.33	+1.1
1,131,539	-		Echvi_0977	0.33	-0.9
1,131,539	-		Echvi_0977	0.33	+1.0
1,131,539	-		Echvi_0977	0.33	+0.5
1,131,577	-		Echvi_0977	0.35	-1.9
1,131,599	+		Echvi_0977	0.37	+0.3
1,131,612	+		Echvi_0977	0.37	-0.3
1,131,656	+		Echvi_0977	0.40	-0.1
1,131,704	+		Echvi_0977	0.44	-1.6
1,131,710	-		Echvi_0977	0.44	-0.8
1,131,710	-		Echvi_0977	0.44	+0.9
1,131,714	-		Echvi_0977	0.44	-0.3