Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_0883

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
1,011,452	+		Echvi_0882	0.51	+1.5
1,011,497	-		Echvi_0882	0.54	-0.9
1,011,497	-		Echvi_0882	0.54	-1.3
1,011,517	+		Echvi_0882	0.55	+3.2
1,011,517	+		Echvi_0882	0.55	+1.7
1,011,524	+		Echvi_0882	0.55	+3.0
1,011,524	+		Echvi_0882	0.55	+1.2
1,011,524	+		Echvi_0882	0.55	+0.3
1,011,525	-		Echvi_0882	0.55	+0.8
1,011,525	-		Echvi_0882	0.55	+1.8
1,011,525	-		Echvi_0882	0.55	-0.0
1,011,525	-		Echvi_0882	0.55	+2.0
1,011,610	-		Echvi_0882	0.60	+2.6
1,011,610	-		Echvi_0882	0.60	+2.3
1,011,610	-		Echvi_0882	0.60	+2.0
1,011,768	+		Echvi_0882	0.69	+1.8
1,011,768	+		Echvi_0882	0.69	+0.3
1,011,781	+		Echvi_0882	0.69	+0.7
1,011,847	+		Echvi_0882	0.73	+0.9
1,011,847	+		Echvi_0882	0.73	+0.6
1,011,847	+		Echvi_0882	0.73	+1.4
1,011,847	+		Echvi_0882	0.73	+1.0
1,011,868	+		Echvi_0882	0.74	+2.3
1,011,869	-		Echvi_0882	0.74	+1.6
1,011,869	-		Echvi_0882	0.74	+1.7
1,011,869	-		Echvi_0882	0.74	+2.0
1,011,893	-		Echvi_0882	0.76	+1.0
1,011,911	+		Echvi_0882	0.77	+0.7
1,011,937	+		Echvi_0882	0.78	+1.0
1,011,986	+		Echvi_0882	0.81	+0.5
1,011,986	+		Echvi_0882	0.81	+1.2
1,012,132	+		Echvi_0882	0.89	+2.3
1,012,138	+		Echvi_0882	0.89	+0.3
1,012,182	+				+1.3
1,012,212	-				+2.0
1,012,213	+				+3.3
1,012,223	-				+0.9
1,012,229	-				+2.0
1,012,230	+				+1.8
1,012,230	+				+0.8
1,012,231	-				+0.8
1,012,319	-				+1.2
1,012,350	-				-0.3
1,012,377	+				-1.7
1,012,377	+				-0.7
1,012,377	+				+0.8
1,012,378	-				-0.6
1,012,410	+				-0.5
1,012,410	+				+0.6
1,012,411	-				-1.3
1,012,415	-				-2.3
1,012,415	-				+0.3
1,012,452	+		Echvi_0883	0.24	-0.2
1,012,455	+		Echvi_0883	0.26	-1.8
1,012,455	+		Echvi_0883	0.26	-2.5
1,012,456	-		Echvi_0883	0.27	-1.5
1,012,456	-		Echvi_0883	0.27	+0.1
1,012,480	-		Echvi_0883	0.42	+0.3
1,012,480	-		Echvi_0883	0.42	-0.2
1,012,498	-		Echvi_0883	0.54	+0.4
1,012,498	-		Echvi_0883	0.54	-1.5
1,012,500	+		Echvi_0883	0.56	-0.7
1,012,500	+		Echvi_0883	0.56	-1.2
1,012,500	+		Echvi_0883	0.56	-0.4
1,012,501	-		Echvi_0883	0.56	+0.5
1,012,501	-		Echvi_0883	0.56	-2.0
1,012,505	-		Echvi_0883	0.59	+0.4
1,012,515	+		Echvi_0883	0.65	-1.2
1,012,546	+		Echvi_0883	0.86	-0.4
1,012,546	+		Echvi_0883	0.86	-0.4
1,012,565	+				-1.6
1,012,566	-				-0.6
1,012,566	-				-1.1
1,012,568	+				-0.8
1,012,588	+				+0.0
1,012,588	+				+0.5
1,012,589	-				-0.6
1,012,589	-				-0.1
1,012,589	-				-0.9
1,012,704	+				-0.5
1,012,704	+				-0.1
1,012,705	-				+0.7
1,012,741	+				+0.1
1,012,742	-				+0.5
1,012,743	+				-0.1
1,012,743	+				-0.8
1,012,744	-				-0.6
1,012,744	-				-1.3
1,012,744	-				+1.4
1,012,744	-				+0.3
1,012,744	-				+2.0
1,012,751	+				+0.3
1,012,752	-				-0.2
1,012,761	+				+0.3
1,012,761	+				-0.3
1,012,761	+				-0.4
1,012,761	+				+2.0
1,012,761	+				-0.3
1,012,761	+				+1.4
1,012,762	-				-3.1
1,012,762	-				-0.6
1,012,770	+				-0.1
1,012,771	-				+0.6
1,012,801	+				+0.5
1,012,801	+				+1.4
1,012,802	-				+1.2
1,012,802	-				-1.2
1,012,802	-				+0.6
1,012,802	-				+1.2
1,012,802	-				-1.2
1,012,813	-				+0.7
1,012,893	+				+1.4
1,012,894	-				+0.4
1,012,894	-				+0.2
1,012,897	+				-1.2
1,012,897	+				-0.5
1,012,897	+				+0.7
1,012,897	+				-1.8
1,012,898	-				-1.7
1,012,905	+				-0.7
1,012,910	+				+0.8
1,012,910	+				+0.6
1,012,911	-				+0.3
1,012,911	-				+2.0
1,012,959	-				+1.0
1,012,959	-				-1.6
1,012,959	-				-1.0
1,012,959	-				+0.7
1,012,964	-				-0.3
1,012,964	-				+3.6
1,012,964	-				-0.5
1,012,964	-				-0.3
1,012,964	-				-0.3
1,012,964	-				-0.6
1,012,966	-				+0.1
1,012,966	-				-0.2
1,012,966	-				+0.4
1,012,966	-				-1.3
1,012,968	-				-0.8
1,012,968	-				-1.2
1,012,968	-				+0.4
1,012,968	-				-1.2
1,012,968	-				+0.1
1,012,971	-				+1.5
1,013,003	+				+1.0
1,013,068	+				+0.9
1,013,069	-				-0.9
1,013,113	+				-0.8
1,013,476	-				-0.6
1,013,479	-				+1.0
1,013,479	-				+0.7
1,013,479	-				-0.3
1,013,479	-				+0.1
1,013,479	-				-0.8
1,013,480	+				+0.0
1,013,480	+				+1.2
1,013,481	-				-0.1
1,013,499	+				+0.0
1,013,499	+				+0.7
1,013,499	+				+0.9
1,013,510	+				+0.3
1,013,510	+				+0.2
1,013,511	-				+0.1
1,013,511	-				+0.1