Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_0755

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
848,191	+				+0.5
848,191	+				+0.7
848,191	+				-0.4
848,191	+				+1.0
848,196	+				-0.3
848,196	+				+0.9
848,196	+				-1.7
848,250	+				-1.0
848,250	+				-1.7
848,257	+				-2.2
848,282	-				-0.4
848,316	-				-0.6
848,340	+				-0.1
848,406	+				+0.3
848,406	+				-0.6
848,407	-				+0.5
848,436	+				-0.5
848,444	-				-0.3
848,488	+				-1.9
848,489	-				-1.6
848,539	+				+0.2
848,559	+				-0.9
848,599	+				-1.5
848,600	-				-1.2
848,600	-				+1.2
848,600	-				+0.3
848,644	-				+0.0
848,722	-				+0.4
848,752	+				-1.1
848,759	-				-0.2
848,762	+				-0.3
848,765	-				+1.4
848,765	-				+1.0
848,778	+				-0.3
848,778	+				-0.4
848,778	+				-1.2
848,824	+				-0.9
848,824	+				-0.1
848,854	-				+0.8
848,882	+				+0.3
848,887	+				+0.2
848,888	-				-0.5
848,900	+				+0.5
848,919	-				-0.9
848,920	+				-0.4
848,920	+				+0.7
848,920	+				-0.1
848,921	-				+1.5
848,924	+				-0.5
848,999	+				-0.8
848,999	+				-0.4
848,999	+				-1.7
849,000	-				+1.5
849,000	-				-0.2
849,000	-				+1.7
849,000	-				-0.6
849,003	+				-0.1
849,003	+				+1.2
849,003	+				+2.5
849,004	-				-3.4
849,004	-				+0.9
849,004	-				-0.5
849,085	+				-0.5
849,087	+				-2.1
849,135	-				-0.7
849,143	-				-2.5
849,210	+				-0.0
849,261	-		Echvi_0755	0.14	-0.0
849,293	+		Echvi_0755	0.17	-0.2
849,373	-		Echvi_0755	0.25	-0.2
849,616	+		Echvi_0755	0.48	+0.4
849,621	+		Echvi_0755	0.48	-1.3
849,748	+		Echvi_0755	0.60	+3.3
849,816	-		Echvi_0755	0.67	-1.2
849,858	+		Echvi_0755	0.71	+0.2
849,888	-		Echvi_0755	0.74	-0.4
849,888	-		Echvi_0755	0.74	-0.7
849,891	+		Echvi_0755	0.74	-0.8
849,891	+		Echvi_0755	0.74	-0.4
849,897	+		Echvi_0755	0.75	-0.5
849,897	+		Echvi_0755	0.75	-0.7
849,898	-		Echvi_0755	0.75	-1.4
849,898	-		Echvi_0755	0.75	-2.0
850,050	+		Echvi_0755	0.89	-1.0
850,050	+		Echvi_0755	0.89	-0.9
850,050	+		Echvi_0755	0.89	-1.3
850,050	+		Echvi_0755	0.89	-1.8
850,050	+		Echvi_0755	0.89	-2.4
850,050	+		Echvi_0755	0.89	+0.4
850,050	+		Echvi_0755	0.89	-0.7
850,050	+		Echvi_0755	0.89	-1.3
850,051	-		Echvi_0755	0.89	+0.4
850,051	-		Echvi_0755	0.89	-0.8
850,051	-		Echvi_0755	0.89	-0.0
850,051	-		Echvi_0755	0.89	-0.3
850,163	-				+0.1
850,168	-				+1.0
850,168	-				+0.5
850,180	+				-0.3
850,180	+				+1.0
850,181	-				-0.8
850,241	+				-0.7
850,266	-				-0.0
850,267	+				-0.3
850,267	+				-0.5
850,268	-				-0.7
850,268	-				+1.0
850,268	-				-0.1
850,268	-				-1.0
850,313	-				-1.2
850,314	+				+0.5
850,320	+				-1.0
850,321	-				-2.3
850,334	+				-0.8
850,334	+				+1.5
850,334	+				+0.6
850,337	+				+0.4
850,337	+				-0.8
850,462	+		Echvi_0756	0.30	+0.2
850,468	-		Echvi_0756	0.31	+0.9
850,471	-		Echvi_0756	0.32	+0.1
850,558	+		Echvi_0756	0.50	+0.0
850,558	+		Echvi_0756	0.50	+0.5
850,558	+		Echvi_0756	0.50	-0.5
850,559	-		Echvi_0756	0.51	-0.1
850,757	+				+0.3
850,795	-				-0.4
850,816	-		Echvi_0757	0.19	+0.3
850,833	-		Echvi_0757	0.28	-0.7
850,837	-		Echvi_0757	0.29	-0.1
850,841	-		Echvi_0757	0.31	+0.7
851,106	+		Echvi_0758	0.18	-1.0
851,106	+		Echvi_0758	0.18	+1.7
851,118	+		Echvi_0758	0.19	+0.5
851,157	+		Echvi_0758	0.24	+2.0