Experiment: m.b. Doxycycline hyclate 0.032 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0675 and Echvi_0676 are separated by 165 nucleotides Echvi_0676 and Echvi_0677 overlap by 4 nucleotides
Echvi_0675: Echvi_0675 - Aspartate/tyrosine/aromatic aminotransferase, at 757,070 to 758,272
_0675
Echvi_0676: Echvi_0676 - Predicted glycosyltransferases, at 758,438 to 759,148
_0676
Echvi_0677: Echvi_0677 - Glycosyltransferases involved in cell wall biogenesis, at 759,145 to 759,939
_0677
Position (kb) 758
759
760 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2
3
4 at 758.266 kb on + strand at 758.266 kb on + strand at 758.267 kb on - strand at 758.267 kb on - strand at 758.267 kb on - strand at 758.267 kb on - strand at 758.299 kb on + strand at 758.304 kb on - strand at 758.376 kb on + strand at 758.454 kb on + strand at 758.455 kb on - strand at 758.455 kb on - strand at 758.458 kb on + strand at 758.459 kb on - strand at 758.459 kb on - strand at 758.459 kb on - strand at 758.518 kb on + strand, within Echvi_0676 at 758.607 kb on - strand, within Echvi_0676 at 758.719 kb on - strand, within Echvi_0676 at 758.730 kb on + strand, within Echvi_0676 at 758.730 kb on + strand, within Echvi_0676 at 758.800 kb on - strand, within Echvi_0676 at 758.800 kb on - strand, within Echvi_0676 at 758.814 kb on + strand, within Echvi_0676 at 758.819 kb on + strand, within Echvi_0676 at 758.819 kb on + strand, within Echvi_0676 at 758.848 kb on + strand, within Echvi_0676 at 758.939 kb on + strand, within Echvi_0676 at 758.939 kb on + strand, within Echvi_0676 at 758.947 kb on + strand, within Echvi_0676 at 758.947 kb on + strand, within Echvi_0676 at 758.947 kb on + strand, within Echvi_0676 at 758.948 kb on - strand, within Echvi_0676 at 758.975 kb on + strand, within Echvi_0676 at 758.986 kb on + strand, within Echvi_0676 at 758.986 kb on + strand, within Echvi_0676 at 759.090 kb on - strand at 759.107 kb on + strand at 759.110 kb on + strand at 759.151 kb on + strand at 759.151 kb on + strand at 759.152 kb on - strand at 759.166 kb on + strand at 759.166 kb on + strand at 759.178 kb on - strand at 759.178 kb on - strand at 759.179 kb on + strand at 759.180 kb on - strand at 759.208 kb on + strand at 759.259 kb on - strand, within Echvi_0677 at 759.332 kb on + strand, within Echvi_0677 at 759.333 kb on - strand, within Echvi_0677 at 759.333 kb on - strand, within Echvi_0677 at 759.333 kb on - strand, within Echvi_0677 at 759.434 kb on + strand, within Echvi_0677 at 759.435 kb on - strand, within Echvi_0677 at 759.438 kb on + strand, within Echvi_0677 at 759.438 kb on + strand, within Echvi_0677 at 759.439 kb on - strand, within Echvi_0677 at 759.439 kb on - strand, within Echvi_0677 at 759.490 kb on - strand, within Echvi_0677 at 759.526 kb on + strand, within Echvi_0677 at 759.527 kb on - strand, within Echvi_0677 at 759.527 kb on - strand, within Echvi_0677 at 759.570 kb on + strand, within Echvi_0677 at 759.570 kb on + strand, within Echvi_0677 at 759.571 kb on - strand, within Echvi_0677 at 759.575 kb on + strand, within Echvi_0677 at 759.575 kb on + strand, within Echvi_0677 at 759.608 kb on - strand, within Echvi_0677 at 759.608 kb on - strand, within Echvi_0677 at 759.614 kb on - strand, within Echvi_0677 at 759.629 kb on + strand, within Echvi_0677 at 759.630 kb on - strand, within Echvi_0677 at 759.630 kb on - strand, within Echvi_0677 at 759.658 kb on + strand, within Echvi_0677 at 759.672 kb on + strand, within Echvi_0677 at 759.673 kb on - strand, within Echvi_0677 at 759.673 kb on - strand, within Echvi_0677 at 759.745 kb on - strand, within Echvi_0677 at 759.745 kb on - strand, within Echvi_0677 at 759.798 kb on + strand, within Echvi_0677 at 759.798 kb on + strand, within Echvi_0677 at 759.799 kb on - strand, within Echvi_0677 at 759.799 kb on - strand, within Echvi_0677 at 759.821 kb on - strand, within Echvi_0677 at 759.827 kb on - strand, within Echvi_0677 at 759.837 kb on - strand, within Echvi_0677 at 759.837 kb on - strand, within Echvi_0677 at 759.876 kb on - strand at 759.876 kb on - strand at 759.890 kb on + strand at 759.890 kb on + strand at 759.891 kb on - strand at 759.910 kb on + strand at 759.978 kb on + strand at 760.005 kb on - strand at 760.009 kb on + strand at 760.018 kb on + strand at 760.019 kb on - strand at 760.025 kb on - strand at 760.025 kb on - strand at 760.028 kb on + strand at 760.028 kb on + strand at 760.028 kb on + strand at 760.029 kb on - strand at 760.031 kb on + strand at 760.032 kb on - strand at 760.071 kb on + strand at 760.129 kb on + strand at 760.137 kb on + strand at 760.138 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Doxycycline hyclate 0.032 mg/ml remove 758,266 + -1.0 758,266 + +0.6 758,267 - -0.3 758,267 - -2.6 758,267 - +0.4 758,267 - -1.8 758,299 + +0.4 758,304 - -1.6 758,376 + +1.1 758,454 + -3.4 758,455 - -2.7 758,455 - -5.0 758,458 + -2.7 758,459 - -4.0 758,459 - -1.6 758,459 - -2.7 758,518 + Echvi_0676 0.11 -3.3 758,607 - Echvi_0676 0.24 -2.6 758,719 - Echvi_0676 0.40 -1.9 758,730 + Echvi_0676 0.41 -5.3 758,730 + Echvi_0676 0.41 -1.2 758,800 - Echvi_0676 0.51 -2.9 758,800 - Echvi_0676 0.51 -4.0 758,814 + Echvi_0676 0.53 -0.4 758,819 + Echvi_0676 0.54 -2.6 758,819 + Echvi_0676 0.54 -3.5 758,848 + Echvi_0676 0.58 -2.1 758,939 + Echvi_0676 0.70 -4.1 758,939 + Echvi_0676 0.70 -2.3 758,947 + Echvi_0676 0.72 -2.0 758,947 + Echvi_0676 0.72 -2.4 758,947 + Echvi_0676 0.72 -3.5 758,948 - Echvi_0676 0.72 -4.4 758,975 + Echvi_0676 0.76 -3.2 758,986 + Echvi_0676 0.77 -4.4 758,986 + Echvi_0676 0.77 -0.4 759,090 - -4.1 759,107 + -3.3 759,110 + -3.0 759,151 + -1.6 759,151 + -0.7 759,152 - +0.7 759,166 + -0.6 759,166 + -0.3 759,178 - +0.1 759,178 - +0.1 759,179 + -0.4 759,180 - -0.0 759,208 + -0.4 759,259 - Echvi_0677 0.14 -0.4 759,332 + Echvi_0677 0.24 -1.2 759,333 - Echvi_0677 0.24 +0.8 759,333 - Echvi_0677 0.24 -0.5 759,333 - Echvi_0677 0.24 +0.2 759,434 + Echvi_0677 0.36 +1.0 759,435 - Echvi_0677 0.36 -0.4 759,438 + Echvi_0677 0.37 +0.4 759,438 + Echvi_0677 0.37 +1.0 759,439 - Echvi_0677 0.37 -0.4 759,439 - Echvi_0677 0.37 +0.2 759,490 - Echvi_0677 0.43 +1.2 759,526 + Echvi_0677 0.48 +0.6 759,527 - Echvi_0677 0.48 +1.5 759,527 - Echvi_0677 0.48 -0.4 759,570 + Echvi_0677 0.53 +1.8 759,570 + Echvi_0677 0.53 -1.7 759,571 - Echvi_0677 0.54 +0.5 759,575 + Echvi_0677 0.54 +1.0 759,575 + Echvi_0677 0.54 +0.1 759,608 - Echvi_0677 0.58 +0.0 759,608 - Echvi_0677 0.58 -1.2 759,614 - Echvi_0677 0.59 +0.1 759,629 + Echvi_0677 0.61 +0.8 759,630 - Echvi_0677 0.61 -1.7 759,630 - Echvi_0677 0.61 +0.7 759,658 + Echvi_0677 0.65 +0.5 759,672 + Echvi_0677 0.66 -0.4 759,673 - Echvi_0677 0.66 +0.8 759,673 - Echvi_0677 0.66 -1.4 759,745 - Echvi_0677 0.75 +2.4 759,745 - Echvi_0677 0.75 -0.1 759,798 + Echvi_0677 0.82 +0.3 759,798 + Echvi_0677 0.82 +4.3 759,799 - Echvi_0677 0.82 -0.4 759,799 - Echvi_0677 0.82 -0.6 759,821 - Echvi_0677 0.85 -1.6 759,827 - Echvi_0677 0.86 +0.1 759,837 - Echvi_0677 0.87 -1.6 759,837 - Echvi_0677 0.87 -0.3 759,876 - +0.4 759,876 - +0.2 759,890 + +1.2 759,890 + +0.8 759,891 - +0.6 759,910 + +0.2 759,978 + -0.8 760,005 - -2.8 760,009 + +0.9 760,018 + +0.7 760,019 - -0.4 760,025 - +0.0 760,025 - -0.0 760,028 + +1.8 760,028 + -1.0 760,028 + +0.0 760,029 - -1.1 760,031 + -0.1 760,032 - +0.0 760,071 + +0.5 760,129 + -0.5 760,137 + +4.3 760,138 - -0.9
Or see this region's nucleotide sequence