Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_0586

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
663,339	+		Echvi_0585	0.36	+1.0
663,339	+		Echvi_0585	0.36	+1.5
663,370	+		Echvi_0585	0.38	-0.1
663,371	-		Echvi_0585	0.38	-0.8
663,413	+		Echvi_0585	0.42	-0.1
663,414	-		Echvi_0585	0.42	-0.4
663,546	+		Echvi_0585	0.53	+3.6
663,547	-		Echvi_0585	0.53	-0.8
663,569	+		Echvi_0585	0.54	+1.8
663,569	+		Echvi_0585	0.54	+3.3
663,570	-		Echvi_0585	0.54	+0.3
663,570	-		Echvi_0585	0.54	+1.2
663,570	-		Echvi_0585	0.54	+0.2
663,667	+		Echvi_0585	0.62	-0.8
663,667	+		Echvi_0585	0.62	+2.8
663,667	+		Echvi_0585	0.62	+2.9
663,667	+		Echvi_0585	0.62	+2.2
663,668	-		Echvi_0585	0.62	+0.3
663,677	-		Echvi_0585	0.63	-0.8
663,709	+		Echvi_0585	0.66	+3.5
663,710	-		Echvi_0585	0.66	-1.4
663,712	+		Echvi_0585	0.66	+2.4
663,712	+		Echvi_0585	0.66	+3.4
663,748	+		Echvi_0585	0.69	+3.1
663,792	+		Echvi_0585	0.72	+2.9
663,824	+		Echvi_0585	0.75	+3.3
663,825	-		Echvi_0585	0.75	-0.3
663,935	+		Echvi_0585	0.84	+2.9
663,935	+		Echvi_0585	0.84	+3.5
663,935	+		Echvi_0585	0.84	+2.7
663,946	+		Echvi_0585	0.85	+4.1
663,946	+		Echvi_0585	0.85	+3.2
663,947	-		Echvi_0585	0.85	+2.5
663,947	-		Echvi_0585	0.85	+0.4
663,965	-		Echvi_0585	0.86	-0.2
663,971	+		Echvi_0585	0.87	+2.8
664,014	-				-0.6
664,014	-				+0.4
664,019	+				+3.0
664,019	+				+3.2
664,019	+				+2.2
664,020	-				-1.0
664,021	+				+3.7
664,021	+				+3.4
664,022	-				+0.2
664,024	+				+3.0
664,024	+				+2.4
664,024	+				+2.9
664,024	+				+3.3
664,025	-				+1.0
664,025	-				-3.2
664,029	-				+0.3
664,038	-				+0.2
664,038	-				-1.5
664,040	+				+2.4
664,075	-				-1.3
664,093	+				+2.6
664,095	+				+3.2
664,095	+				+3.3
664,096	-				-0.5
664,134	+				+2.9
664,135	-				-0.8
664,163	-				+2.1
664,172	+				+3.8
664,176	+				+3.3
664,176	+				+3.4
664,176	+				+2.8
664,177	-				+0.2
664,177	-				+1.0
664,177	-				-0.0
664,177	-				-0.8
664,177	-				+0.6
664,178	+				+2.3
664,196	-				+0.1
664,196	-				+0.7
664,196	-				+0.8
664,199	+				+2.7
664,199	+				+2.4
664,200	-				+0.4
664,203	-				-1.1
664,203	-				-0.4
664,219	-				-0.6
664,287	+				-2.8
664,289	+				-1.0
664,289	+				-1.9
664,290	-				-1.5
664,301	+				-1.6
664,328	+				-0.0
664,380	+		Echvi_0586	0.18	-2.2
664,384	-		Echvi_0586	0.19	-1.1
664,461	+		Echvi_0586	0.36	-2.1
664,509	-		Echvi_0586	0.46	-1.4
664,545	+		Echvi_0586	0.54	-1.8
664,545	+		Echvi_0586	0.54	-0.8
664,711	-		Echvi_0586	0.89	-3.3
664,711	-		Echvi_0586	0.89	-3.6
664,713	-		Echvi_0586	0.89	-1.3
664,757	+				-2.1
664,758	-				-2.5
664,758	-				-0.4
664,819	+				-0.7
664,819	+				+0.5
664,824	+				+0.1
664,824	+				-1.3
664,860	+				+1.6
664,888	+				+0.5
664,901	+				-1.8
664,901	+				-0.8
664,902	-				-0.2
665,021	-		Echvi_0587	0.15	-3.5
665,021	-		Echvi_0587	0.15	-0.8
665,080	+		Echvi_0587	0.20	-0.2
665,190	+		Echvi_0587	0.28	+0.8
665,506	+		Echvi_0587	0.52	-0.4
665,545	+		Echvi_0587	0.55	-0.4
665,550	+		Echvi_0587	0.55	+0.4
665,551	-		Echvi_0587	0.56	-0.5
665,568	+		Echvi_0587	0.57	+0.2
665,568	+		Echvi_0587	0.57	+0.2
665,569	-		Echvi_0587	0.57	-2.6
665,680	+		Echvi_0587	0.65	-0.6
665,732	+		Echvi_0587	0.69	+0.4
665,734	+		Echvi_0587	0.69	+0.9
665,734	+		Echvi_0587	0.69	+0.8
665,735	-		Echvi_0587	0.70	-1.2
665,735	-		Echvi_0587	0.70	+0.7
665,741	-		Echvi_0587	0.70	-1.7