Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_0539

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
599,978	-		Echvi_0537	0.80	-0.2
599,978	-		Echvi_0537	0.80	+1.5
599,978	-		Echvi_0537	0.80	+1.6
599,985	-		Echvi_0537	0.81	+0.4
599,987	+		Echvi_0537	0.81	+0.5
600,032	+		Echvi_0537	0.88	+1.0
600,032	+		Echvi_0537	0.88	-0.9
600,032	+		Echvi_0537	0.88	-1.1
600,032	+		Echvi_0537	0.88	-0.8
600,033	-		Echvi_0537	0.88	+0.0
600,033	-		Echvi_0537	0.88	+1.4
600,033	-		Echvi_0537	0.88	-1.6
600,075	-				-1.3
600,135	-				+0.5
600,135	-				+1.7
600,135	-				-1.4
600,135	-				+0.5
600,136	+				-2.5
600,136	+				+0.3
600,136	+				+0.4
600,136	+				-0.3
600,137	-				+0.0
600,137	-				+0.7
600,137	-				+1.4
600,156	-				+0.9
600,156	-				+2.0
600,164	-				+1.3
600,164	-				-0.6
600,180	+				+0.7
600,181	-				+0.8
600,183	-				+0.7
600,183	-				+2.0
600,183	-				+1.0
600,183	-				-2.0
600,191	+				+2.3
600,221	-				+1.3
600,227	+				+0.1
600,334	+				+2.0
600,335	-		Echvi_0538	0.13	-1.5
600,335	-		Echvi_0538	0.13	-0.2
600,339	-		Echvi_0538	0.14	-1.2
600,339	-		Echvi_0538	0.14	-0.5
600,339	-		Echvi_0538	0.14	+0.4
600,445	-		Echvi_0538	0.27	+1.2
600,507	+		Echvi_0538	0.35	-0.6
600,508	-		Echvi_0538	0.35	+1.4
600,585	+		Echvi_0538	0.45	+1.3
600,586	-		Echvi_0538	0.45	-1.0
600,586	-		Echvi_0538	0.45	+0.4
600,586	-		Echvi_0538	0.45	-1.4
600,586	-		Echvi_0538	0.45	-1.4
600,586	-		Echvi_0538	0.45	+0.6
600,664	+		Echvi_0538	0.55	+0.4
600,942	-		Echvi_0538	0.90	+1.0
600,942	-		Echvi_0538	0.90	+0.4
600,960	+				-0.0
600,960	+				+1.6
601,019	-				-0.2
601,020	+				-0.8
601,020	+				-0.6
601,021	-				+0.1
601,027	-		Echvi_0539	0.13	-2.4
601,079	-		Echvi_0539	0.26	-0.6
601,079	-		Echvi_0539	0.26	-0.4
601,114	+		Echvi_0539	0.35	-0.0
601,151	-		Echvi_0539	0.44	+1.0
601,156	+		Echvi_0539	0.45	+1.0
601,157	-		Echvi_0539	0.45	-0.8
601,175	-		Echvi_0539	0.50	-1.7
601,175	-		Echvi_0539	0.50	-0.0
601,241	+		Echvi_0539	0.66	+0.4
601,241	+		Echvi_0539	0.66	-2.0
601,245	-		Echvi_0539	0.67	-1.4
601,332	-		Echvi_0539	0.88	-0.0
601,372	+				+0.0
601,372	+				+0.1
601,373	-				-2.7
601,377	+				+0.7
601,377	+				-1.5
601,377	+				-0.3
601,377	+				-1.4
601,378	-				-0.8
601,378	-				-0.7
601,378	-				-1.1
601,378	-				-0.7
601,459	+				+1.2
601,460	-				+0.4
601,460	-				+0.2
601,460	-				-0.3
601,469	+				+0.5
601,469	+				-1.3
601,469	+				-2.4
601,581	+				-0.0
601,601	-				-0.3
601,627	+				+0.8
601,627	+				+0.1
601,627	+				+0.5
601,627	+				+0.2
601,627	+				+0.1
601,628	-				+0.3
601,632	-				+2.5
601,721	+				+0.7
601,722	-				+1.0
601,722	-				+3.0
601,764	-		Echvi_0540	0.12	+0.5
601,807	+		Echvi_0540	0.15	-1.0
601,859	-		Echvi_0540	0.18	+1.1
601,859	-		Echvi_0540	0.18	-1.2
601,889	-		Echvi_0540	0.20	+1.3
601,947	-		Echvi_0540	0.24	-0.6
601,984	+		Echvi_0540	0.27	+0.4
601,984	+		Echvi_0540	0.27	+0.2
601,986	+		Echvi_0540	0.27	+1.4
601,986	+		Echvi_0540	0.27	-1.5
601,986	+		Echvi_0540	0.27	-0.5
601,987	-		Echvi_0540	0.27	+1.0
601,987	-		Echvi_0540	0.27	+1.0
602,015	-		Echvi_0540	0.29	+1.4
602,024	+		Echvi_0540	0.30	-0.9
602,201	+		Echvi_0540	0.42	-0.7
602,261	+		Echvi_0540	0.46	-0.2
602,262	-		Echvi_0540	0.46	+0.8
602,296	+		Echvi_0540	0.49	+0.6
602,319	+		Echvi_0540	0.50	+1.1
602,319	+		Echvi_0540	0.50	-0.9
602,319	+		Echvi_0540	0.50	-0.6
602,320	-		Echvi_0540	0.50	+0.1