Experiment: m.b. Doxycycline hyclate 0.032 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0141 and Echvi_0142 overlap by 8 nucleotides Echvi_0142 and Echvi_0143 are separated by 17 nucleotides Echvi_0143 and Echvi_0144 overlap by 4 nucleotides
Echvi_0141: Echvi_0141 - Predicted membrane-associated, metal-dependent hydrolase, at 141,044 to 142,135
_0141
Echvi_0142: Echvi_0142 - Domain of Unknown Function (DUF1599)., at 142,128 to 142,679
_0142
Echvi_0143: Echvi_0143 - dihydropteroate synthase, at 142,697 to 143,581
_0143
Echvi_0144: Echvi_0144 - TIGR00159 family protein, at 143,578 to 144,444
_0144
Position (kb) 142
143 Strain fitness (log2 ratio) -1
0
1
2
3 at 141.131 kb on + strand at 141.131 kb on + strand at 141.132 kb on - strand at 141.172 kb on + strand, within Echvi_0141 at 141.186 kb on + strand, within Echvi_0141 at 141.186 kb on + strand, within Echvi_0141 at 141.186 kb on + strand, within Echvi_0141 at 141.187 kb on - strand, within Echvi_0141 at 141.190 kb on - strand, within Echvi_0141 at 141.190 kb on - strand, within Echvi_0141 at 141.251 kb on - strand, within Echvi_0141 at 141.253 kb on + strand, within Echvi_0141 at 141.331 kb on + strand, within Echvi_0141 at 141.331 kb on + strand, within Echvi_0141 at 141.331 kb on + strand, within Echvi_0141 at 141.332 kb on - strand, within Echvi_0141 at 141.332 kb on - strand, within Echvi_0141 at 141.332 kb on - strand, within Echvi_0141 at 141.480 kb on + strand, within Echvi_0141 at 141.520 kb on + strand, within Echvi_0141 at 141.520 kb on + strand, within Echvi_0141 at 141.522 kb on + strand, within Echvi_0141 at 141.522 kb on + strand, within Echvi_0141 at 141.523 kb on - strand, within Echvi_0141 at 141.565 kb on + strand, within Echvi_0141 at 141.605 kb on + strand, within Echvi_0141 at 141.753 kb on + strand, within Echvi_0141 at 141.831 kb on + strand, within Echvi_0141 at 141.872 kb on + strand, within Echvi_0141 at 141.873 kb on - strand, within Echvi_0141 at 141.921 kb on - strand, within Echvi_0141 at 141.921 kb on - strand, within Echvi_0141 at 141.941 kb on + strand, within Echvi_0141 at 141.941 kb on + strand, within Echvi_0141 at 141.942 kb on - strand, within Echvi_0141 at 141.942 kb on - strand, within Echvi_0141 at 141.942 kb on - strand, within Echvi_0141 at 141.973 kb on + strand, within Echvi_0141 at 141.973 kb on + strand, within Echvi_0141 at 141.997 kb on + strand, within Echvi_0141 at 142.033 kb on + strand at 142.064 kb on + strand at 142.064 kb on + strand at 142.065 kb on - strand at 142.116 kb on - strand at 142.118 kb on + strand at 142.118 kb on + strand at 143.571 kb on + strand at 143.573 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Doxycycline hyclate 0.032 mg/ml remove 141,131 + +0.3 141,131 + +0.7 141,132 - -0.4 141,172 + Echvi_0141 0.12 +0.5 141,186 + Echvi_0141 0.13 -0.3 141,186 + Echvi_0141 0.13 +0.9 141,186 + Echvi_0141 0.13 +0.5 141,187 - Echvi_0141 0.13 -0.3 141,190 - Echvi_0141 0.13 -0.2 141,190 - Echvi_0141 0.13 +0.0 141,251 - Echvi_0141 0.19 +0.9 141,253 + Echvi_0141 0.19 +0.1 141,331 + Echvi_0141 0.26 +0.4 141,331 + Echvi_0141 0.26 -0.1 141,331 + Echvi_0141 0.26 +2.8 141,332 - Echvi_0141 0.26 -0.6 141,332 - Echvi_0141 0.26 -0.4 141,332 - Echvi_0141 0.26 +0.1 141,480 + Echvi_0141 0.40 +0.4 141,520 + Echvi_0141 0.44 -1.1 141,520 + Echvi_0141 0.44 -0.2 141,522 + Echvi_0141 0.44 +0.7 141,522 + Echvi_0141 0.44 +1.1 141,523 - Echvi_0141 0.44 -1.2 141,565 + Echvi_0141 0.48 -1.5 141,605 + Echvi_0141 0.51 +1.2 141,753 + Echvi_0141 0.65 +0.6 141,831 + Echvi_0141 0.72 +1.3 141,872 + Echvi_0141 0.76 -1.1 141,873 - Echvi_0141 0.76 +0.9 141,921 - Echvi_0141 0.80 +0.5 141,921 - Echvi_0141 0.80 +0.5 141,941 + Echvi_0141 0.82 -0.3 141,941 + Echvi_0141 0.82 -1.1 141,942 - Echvi_0141 0.82 -0.6 141,942 - Echvi_0141 0.82 +2.7 141,942 - Echvi_0141 0.82 -0.3 141,973 + Echvi_0141 0.85 +1.7 141,973 + Echvi_0141 0.85 +1.6 141,997 + Echvi_0141 0.87 +0.8 142,033 + -0.1 142,064 + +0.9 142,064 + +0.4 142,065 - -0.1 142,116 - -0.5 142,118 + -0.4 142,118 + +1.2 143,571 + -1.4 143,573 + -0.6
Or see this region's nucleotide sequence