Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_0141

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
140,059	+		Echvi_0139	0.68	+0.8
140,060	-		Echvi_0139	0.68	-2.2
140,063	+		Echvi_0139	0.69	-0.6
140,063	+		Echvi_0139	0.69	-1.3
140,064	-		Echvi_0139	0.69	-0.4
140,064	-		Echvi_0139	0.69	-1.1
140,076	+		Echvi_0139	0.70	-0.1
140,154	+		Echvi_0139	0.75	-0.7
140,155	-		Echvi_0139	0.75	+0.4
140,159	+		Echvi_0139	0.75	-1.7
140,285	-		Echvi_0139	0.84	-1.4
140,296	-		Echvi_0139	0.84	-2.3
140,306	-		Echvi_0139	0.85	-0.9
140,329	+		Echvi_0139	0.87	-0.4
140,330	-		Echvi_0139	0.87	-2.7
140,389	-				-0.3
140,392	+				-1.6
140,392	+				-0.6
140,395	+				+0.0
140,395	+				+0.9
140,395	+				+0.5
140,396	-				-0.4
140,396	-				-0.8
140,396	-				-2.3
140,396	-				-1.4
140,396	-				+0.4
140,396	-				-1.0
140,396	-				+0.0
140,399	+				-1.1
140,400	-				-0.2
140,434	+				-0.2
140,438	+				-0.2
140,439	-				-0.7
140,441	+				-2.1
140,441	+				+1.4
140,441	+				-0.2
140,470	+				+0.5
140,474	-				-0.3
140,503	-				-1.9
140,515	+				-0.6
140,565	-				-0.2
141,075	-				-0.6
141,131	+				+0.3
141,131	+				+0.7
141,132	-				-0.4
141,172	+		Echvi_0141	0.12	+0.5
141,186	+		Echvi_0141	0.13	-0.3
141,186	+		Echvi_0141	0.13	+0.9
141,186	+		Echvi_0141	0.13	+0.5
141,187	-		Echvi_0141	0.13	-0.3
141,190	-		Echvi_0141	0.13	-0.2
141,190	-		Echvi_0141	0.13	+0.0
141,251	-		Echvi_0141	0.19	+0.9
141,253	+		Echvi_0141	0.19	+0.1
141,331	+		Echvi_0141	0.26	+0.4
141,331	+		Echvi_0141	0.26	-0.1
141,331	+		Echvi_0141	0.26	+2.8
141,332	-		Echvi_0141	0.26	-0.6
141,332	-		Echvi_0141	0.26	-0.4
141,332	-		Echvi_0141	0.26	+0.1
141,480	+		Echvi_0141	0.40	+0.4
141,520	+		Echvi_0141	0.44	-1.1
141,520	+		Echvi_0141	0.44	-0.2
141,522	+		Echvi_0141	0.44	+0.7
141,522	+		Echvi_0141	0.44	+1.1
141,523	-		Echvi_0141	0.44	-1.2
141,565	+		Echvi_0141	0.48	-1.5
141,605	+		Echvi_0141	0.51	+1.2
141,753	+		Echvi_0141	0.65	+0.6
141,831	+		Echvi_0141	0.72	+1.3
141,872	+		Echvi_0141	0.76	-1.1
141,873	-		Echvi_0141	0.76	+0.9
141,921	-		Echvi_0141	0.80	+0.5
141,921	-		Echvi_0141	0.80	+0.5
141,941	+		Echvi_0141	0.82	-0.3
141,941	+		Echvi_0141	0.82	-1.1
141,942	-		Echvi_0141	0.82	-0.6
141,942	-		Echvi_0141	0.82	+2.7
141,942	-		Echvi_0141	0.82	-0.3
141,973	+		Echvi_0141	0.85	+1.7
141,973	+		Echvi_0141	0.85	+1.6
141,997	+		Echvi_0141	0.87	+0.8
142,033	+				-0.1
142,064	+				+0.9
142,064	+				+0.4
142,065	-				-0.1
142,116	-				-0.5
142,118	+				-0.4
142,118	+				+1.2