Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_0099

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
97,040	+		Echvi_0097	0.81	-0.8
97,078	-		Echvi_0097	0.84	-1.4
97,150	+		Echvi_0097	0.88	+1.2
97,151	-		Echvi_0097	0.89	-0.9
97,210	+				+0.5
97,266	+				-0.4
97,266	+				-0.5
97,267	-				+0.4
97,267	-				+0.2
97,267	-				+1.3
97,278	-				-2.8
97,278	-				-2.0
97,309	+				-1.4
97,309	+				+0.4
97,309	+				-0.2
97,309	+				+0.5
97,309	+				+0.4
97,311	+				-0.0
97,312	-				+0.7
97,351	-				+0.9
97,362	+				+0.7
97,363	-				-0.1
97,363	-				-1.6
97,426	+				-0.9
97,426	+				+0.8
97,460	-				+1.9
97,588	+		Echvi_0098	0.28	+0.2
97,588	+		Echvi_0098	0.28	-0.4
97,859	+		Echvi_0098	0.87	+0.7
97,859	+		Echvi_0098	0.87	-1.0
97,860	-		Echvi_0098	0.88	+0.3
97,903	+				+1.9
97,903	+				+0.4
97,918	+				+2.5
97,947	-				+1.2
97,965	+				-0.5
97,966	-				+0.1
97,966	-				+0.1
98,002	+				+0.1
98,018	-				-0.2
98,060	-				-0.0
98,084	+		Echvi_0099	0.11	+0.0
98,096	+		Echvi_0099	0.12	+0.5
98,096	+		Echvi_0099	0.12	-0.3
98,097	-		Echvi_0099	0.12	-1.8
98,102	+		Echvi_0099	0.13	-0.6
98,139	-		Echvi_0099	0.16	+0.8
98,146	+		Echvi_0099	0.17	-0.2
98,147	-		Echvi_0099	0.17	+0.8
98,158	-		Echvi_0099	0.18	+0.2
98,374	-		Echvi_0099	0.36	+0.3
98,374	-		Echvi_0099	0.36	+1.2
98,387	+		Echvi_0099	0.37	-0.8
98,411	+		Echvi_0099	0.39	+0.3
98,412	-		Echvi_0099	0.39	+0.8
98,496	+		Echvi_0099	0.46	-0.1
98,536	+		Echvi_0099	0.50	+0.8
98,580	+		Echvi_0099	0.53	-0.2
98,580	+		Echvi_0099	0.53	+1.4
98,664	-		Echvi_0099	0.60	+0.4
98,772	+		Echvi_0099	0.69	+1.9
98,772	+		Echvi_0099	0.69	+1.8
98,772	+		Echvi_0099	0.69	+0.1
98,773	-		Echvi_0099	0.70	+1.4
98,783	+		Echvi_0099	0.70	+0.1
98,815	+		Echvi_0099	0.73	+2.3
98,815	+		Echvi_0099	0.73	-1.1
98,815	+		Echvi_0099	0.73	+0.8
98,816	-		Echvi_0099	0.73	+0.9
98,816	-		Echvi_0099	0.73	-0.1
98,816	-		Echvi_0099	0.73	-0.2
98,820	-		Echvi_0099	0.74	-2.1
98,950	-		Echvi_0099	0.84	-0.2
99,032	+				-0.4
99,060	-				-0.1
99,068	+				+0.1
99,226	+				+0.1
99,227	-				+1.2
99,227	-				+1.2
99,227	-				-0.0
99,236	-				+0.5
99,256	+				+0.4
99,306	+		Echvi_0100	0.15	+0.7
99,307	-		Echvi_0100	0.15	-0.2
99,308	+		Echvi_0100	0.16	+0.4
99,309	-		Echvi_0100	0.16	+0.4
99,309	-		Echvi_0100	0.16	+0.6
99,334	-		Echvi_0100	0.19	+0.2
99,479	+		Echvi_0100	0.39	+0.2
99,516	+		Echvi_0100	0.44	-0.5
99,517	-		Echvi_0100	0.45	-1.3
99,521	+		Echvi_0100	0.45	-0.9
99,521	+		Echvi_0100	0.45	-0.3
99,575	+		Echvi_0100	0.53	+1.4
99,575	+		Echvi_0100	0.53	+1.3
99,576	-		Echvi_0100	0.53	+1.6
99,586	+		Echvi_0100	0.54	-0.2
99,586	+		Echvi_0100	0.54	-0.6
99,586	+		Echvi_0100	0.54	-1.2
99,587	-		Echvi_0100	0.54	+1.4
99,635	-		Echvi_0100	0.61	+0.2
99,652	+		Echvi_0100	0.63	-0.3
99,674	+		Echvi_0100	0.66	+1.0
99,706	+		Echvi_0100	0.71	-0.4
99,707	-		Echvi_0100	0.71	+0.1
99,707	-		Echvi_0100	0.71	-0.4
99,707	-		Echvi_0100	0.71	+0.2
99,708	+		Echvi_0100	0.71	-0.4
99,793	-		Echvi_0100	0.83	-0.8
99,833	+		Echvi_0100	0.88	-0.6
99,834	-		Echvi_0100	0.89	-0.8
99,834	-		Echvi_0100	0.89	+0.2
99,874	+				+0.7
99,875	-				-0.3
99,916	-				-0.5
99,947	+				-0.1
99,948	-				+0.0
99,948	-				+0.7
99,974	+				-0.1
99,975	-				+0.9
99,986	-				+0.1
100,128	+		Echvi_0101	0.33	-1.1
100,129	-		Echvi_0101	0.33	+0.7