Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_0019

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
16,777	+		Echvi_0017	0.67	-2.3
16,778	-		Echvi_0017	0.67	+0.9
16,778	-		Echvi_0017	0.67	-0.1
16,783	+		Echvi_0017	0.68	+0.4
16,783	+		Echvi_0017	0.68	+0.5
16,803	-		Echvi_0017	0.71	-0.9
16,849	-		Echvi_0017	0.77	+3.2
16,860	+		Echvi_0017	0.78	+0.2
16,860	+		Echvi_0017	0.78	-0.4
16,884	-		Echvi_0017	0.81	-0.9
16,908	+		Echvi_0017	0.84	+0.2
16,908	+		Echvi_0017	0.84	+0.4
16,909	-		Echvi_0017	0.85	-0.2
16,909	-		Echvi_0017	0.85	+0.8
16,909	-		Echvi_0017	0.85	+0.6
16,910	+		Echvi_0017	0.85	-0.9
16,910	+		Echvi_0017	0.85	+0.9
16,910	+		Echvi_0017	0.85	+1.2
16,911	-		Echvi_0017	0.85	-0.3
16,911	-		Echvi_0017	0.85	-0.3
17,111	-		Echvi_0018	0.11	+0.1
17,111	-		Echvi_0018	0.11	+0.3
17,111	-		Echvi_0018	0.11	+1.4
17,168	-		Echvi_0018	0.19	+0.7
17,208	+		Echvi_0018	0.25	-1.7
17,252	+		Echvi_0018	0.32	-0.5
17,253	-		Echvi_0018	0.32	-0.2
17,301	+		Echvi_0018	0.39	-0.3
17,302	-		Echvi_0018	0.39	+0.3
17,310	+		Echvi_0018	0.40	-1.1
17,311	-		Echvi_0018	0.40	-0.1
17,311	-		Echvi_0018	0.40	+3.5
17,321	-		Echvi_0018	0.42	-0.4
17,321	-		Echvi_0018	0.42	-1.4
17,437	+		Echvi_0018	0.59	+0.2
17,483	+		Echvi_0018	0.66	-0.1
17,647	-				+1.1
17,653	+				-0.2
17,708	+				+1.0
17,709	-				-0.1
17,709	-				+0.1
17,866	-		Echvi_0019	0.14	-0.7
17,887	+		Echvi_0019	0.17	+1.3
17,891	+		Echvi_0019	0.17	+1.4
17,891	+		Echvi_0019	0.17	+0.9
17,913	+		Echvi_0019	0.21	+0.7
17,913	+		Echvi_0019	0.21	+0.1
17,914	-		Echvi_0019	0.21	+0.1
17,915	+		Echvi_0019	0.21	-0.1
17,916	-		Echvi_0019	0.21	-0.5
17,949	+		Echvi_0019	0.26	+1.9
17,950	-		Echvi_0019	0.26	-2.1
17,955	+		Echvi_0019	0.27	-0.4
17,956	-		Echvi_0019	0.27	+1.4
18,056	-		Echvi_0019	0.42	+2.1
18,056	-		Echvi_0019	0.42	-0.4
18,058	+		Echvi_0019	0.42	+1.2
18,152	+		Echvi_0019	0.56	+1.7
18,152	+		Echvi_0019	0.56	-0.3
18,153	-		Echvi_0019	0.57	-0.6
18,178	-		Echvi_0019	0.60	-2.1
18,180	-		Echvi_0019	0.61	-1.6
18,276	+		Echvi_0019	0.75	+0.8
18,277	-		Echvi_0019	0.75	+0.9
18,277	-		Echvi_0019	0.75	+0.5
18,336	+		Echvi_0019	0.84	+0.4
18,427	-				+0.4
18,427	-				+0.0
18,467	+				+0.5
18,505	-				-0.1
18,685	-				-1.3
18,726	-				+0.6
18,728	-				+1.3
18,731	+				+0.8
18,744	+				+1.1
18,794	+				+1.7