Strain Fitness in Escherichia coli BW25113 around b4306

Experiment: Doxycycline hyclate 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.001 mg/ml
4,529,517	-	sgcX	b4305	0.86	+0.4
4,529,517	-	sgcX	b4305	0.86	-1.1
4,529,688	-				+1.4
4,529,688	-				+0.3
4,529,771	+				-0.4
4,529,806	+				-0.6
4,529,806	+				+1.4
4,529,838	+				-0.8
4,529,851	+				-0.3
4,529,851	-				+0.7
4,529,851	-				-0.1
4,529,895	+				-0.7
4,529,903	+				+0.9
4,529,903	-				-1.1
4,529,948	+				-0.2
4,529,963	-				+0.4
4,529,963	-				+0.1
4,530,060	-				-0.6
4,530,063	+				-0.4
4,530,071	-				-0.7
4,530,173	+	yjhY	b4656	0.38	+0.7
4,530,226	+	yjhY	b4656	0.59	-0.3
4,530,249	-	yjhY	b4656	0.67	-0.6
4,530,249	-	yjhY	b4656	0.67	+1.0
4,530,271	+	yjhY	b4656	0.76	+0.4
4,530,273	+	yjhY	b4656	0.77	+0.3
4,530,306	+	yjhY	b4656	0.89	-1.1
4,530,306	+	yjhY	b4656	0.89	+0.3
4,530,331	+				-0.1
4,530,341	+				-0.2
4,530,342	+				+1.2
4,530,482	-				+0.4
4,530,482	-				+0.1
4,530,553	-	yjhP	b4306	0.12	+0.9
4,530,617	+	yjhP	b4306	0.21	+0.4
4,530,644	-	yjhP	b4306	0.25	+0.3
4,530,709	+	yjhP	b4306	0.33	+0.0
4,530,773	-	yjhP	b4306	0.42	-0.6
4,530,786	-	yjhP	b4306	0.44	+0.4
4,530,806	-	yjhP	b4306	0.46	+0.1
4,530,841	-	yjhP	b4306	0.51	+0.7
4,530,977	+	yjhP	b4306	0.69	+0.9
4,531,045	-	yjhP	b4306	0.78	-1.0
4,531,057	-	yjhP	b4306	0.80	-0.7
4,531,128	+	yjhP	b4306	0.89	-0.3
4,531,128	+	yjhP	b4306	0.89	+0.2
4,531,128	-	yjhP	b4306	0.89	+0.9
4,531,152	+				+0.1
4,531,173	-				-1.0
4,531,196	-				-0.8
4,531,196	-				+1.2
4,531,265	+				+0.1
4,531,265	+				-1.1
4,531,288	+				-1.6
4,531,300	+				-0.1
4,531,317	+	yjhQ	b4307	0.10	+0.7
4,531,322	+	yjhQ	b4307	0.11	+0.1
4,531,356	+	yjhQ	b4307	0.17	-0.2
4,531,366	+	yjhQ	b4307	0.19	+0.4
4,531,366	+	yjhQ	b4307	0.19	+0.4
4,531,384	-	yjhQ	b4307	0.22	-0.6
4,531,385	-	yjhQ	b4307	0.23	-0.6
4,531,414	+	yjhQ	b4307	0.28	+1.4
4,531,414	+	yjhQ	b4307	0.28	-0.5
4,531,433	+	yjhQ	b4307	0.31	+0.4
4,531,433	+	yjhQ	b4307	0.31	-0.6
4,531,433	-	yjhQ	b4307	0.31	-0.7
4,531,487	-	yjhQ	b4307	0.41	+2.0
4,531,487	-	yjhQ	b4307	0.41	+1.4
4,531,487	-	yjhQ	b4307	0.41	+0.4
4,531,487	-	yjhQ	b4307	0.41	-1.0
4,531,492	-	yjhQ	b4307	0.42	+2.0
4,531,492	-	yjhQ	b4307	0.42	+0.4
4,531,512	-	yjhQ	b4307	0.46	-0.1
4,531,528	+	yjhQ	b4307	0.49	-0.1
4,531,558	+	yjhQ	b4307	0.54	-0.7
4,531,572	+	yjhQ	b4307	0.57	-1.1
4,531,687	+	yjhQ	b4307	0.78	-1.6
4,531,702	+	yjhQ	b4307	0.81	+0.2
4,531,754	-				+1.0
4,531,754	-				+0.0
4,531,755	+				-1.6
4,531,755	+				-1.1
4,531,801	-				-0.4
4,531,811	-				+0.4
4,531,871	+	yjhX	b4566	0.20	+0.2
4,531,881	+	yjhX	b4566	0.24	+0.1
4,531,940	+	yjhX	b4566	0.47	-0.1
4,531,956	+	yjhX	b4566	0.53	+1.4
4,531,956	+	yjhX	b4566	0.53	+0.2
4,531,959	+	yjhX	b4566	0.54	-1.1
4,531,959	+	yjhX	b4566	0.54	-0.8
4,531,967	-	yjhX	b4566	0.57	-0.6
4,531,967	-	yjhX	b4566	0.57	+0.8
4,532,029	-	yjhX	b4566	0.81	+0.4
4,532,029	-	yjhX	b4566	0.81	-0.6
4,532,086	+				+0.2
4,532,089	+				+0.4
4,532,110	+				+0.3
4,532,118	-				-3.6
4,532,123	-				-0.1
4,532,123	-				+0.4
4,532,131	-				+0.4
4,532,161	-				-0.2
4,532,195	+				-0.6