Strain Fitness in Escherichia coli BW25113 around b2831

Experiment: Doxycycline hyclate 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.001 mg/ml
2,966,722	+	nudH	b2830	0.48	+1.3
2,967,071	+				-2.0
2,967,078	+				-0.7
2,967,078	+				+0.3
2,967,640	-				-0.5
2,967,694	-				+0.9
2,967,728	+				-1.1
2,967,768	-	mutH	b2831	0.12	+2.3
2,967,768	-	mutH	b2831	0.12	-1.2
2,967,994	-	mutH	b2831	0.45	-2.1
2,968,044	+	mutH	b2831	0.52	-1.0
2,968,088	+	mutH	b2831	0.59	-1.2
2,968,088	+	mutH	b2831	0.59	-0.1
2,968,096	-	mutH	b2831	0.60	-0.9
2,968,174	+	mutH	b2831	0.71	+0.3
2,968,179	-	mutH	b2831	0.72	-0.4
2,968,183	-	mutH	b2831	0.72	-0.7
2,968,499	+				+1.3
2,968,509	-				+0.3
2,968,509	-				+0.6
2,968,614	-	ygdQ	b2832	0.24	-0.5
2,968,614	-	ygdQ	b2832	0.24	-0.1
2,968,620	-	ygdQ	b2832	0.25	+0.3
2,968,620	-	ygdQ	b2832	0.25	+1.3
2,968,648	+	ygdQ	b2832	0.29	-1.0
2,968,648	+	ygdQ	b2832	0.29	+0.3
2,968,674	+	ygdQ	b2832	0.32	+0.8
2,968,786	-	ygdQ	b2832	0.48	-1.1
2,968,829	+	ygdQ	b2832	0.54	-0.2
2,968,856	-	ygdQ	b2832	0.58	+0.6
2,968,880	+	ygdQ	b2832	0.61	-1.4
2,968,942	+	ygdQ	b2832	0.70	-1.7
2,968,942	+	ygdQ	b2832	0.70	+0.3
2,968,955	-	ygdQ	b2832	0.72	-0.2
2,969,039	-	ygdQ	b2832	0.84	+0.3
2,969,039	-	ygdQ	b2832	0.84	+2.3
2,969,108	-				+0.0
2,969,108	-				-1.7
2,969,160	-				+0.1
2,969,160	-				+1.3
2,969,164	+				+0.1
2,969,172	-				+0.9
2,969,172	-				-0.1
2,969,193	+				+0.2
2,969,193	-				-0.1
2,969,202	-				+0.5
2,969,231	+				+0.2
2,969,242	-				-0.9
2,969,263	+				-1.2
2,969,263	+				+1.7
2,969,280	-				+0.5
2,969,281	-				+0.9
2,969,286	-				-0.5
2,969,327	+	ygdR	b2833	0.16	-0.2