Strain Fitness in Escherichia coli BW25113 around b2737

Experiment: Doxycycline hyclate 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.001 mg/ml
2,859,528	-				-0.2
2,859,528	-				+1.0
2,859,539	-				+0.7
2,859,664	+	ygbJ	b2736	0.23	+0.3
2,859,852	-	ygbJ	b2736	0.44	-0.2
2,859,962	-	ygbJ	b2736	0.56	+0.2
2,859,965	+	ygbJ	b2736	0.56	+0.2
2,860,243	+	ygbJ	b2736	0.87	+0.7
2,860,243	+	ygbJ	b2736	0.87	-0.3
2,860,296	+				+0.6
2,860,464	-				+0.9
2,860,540	-	ygbK	b2737	0.16	+0.3
2,860,598	-	ygbK	b2737	0.21	+0.7
2,860,598	-	ygbK	b2737	0.21	+0.3
2,860,657	+	ygbK	b2737	0.26	+1.3
2,860,721	+	ygbK	b2737	0.31	+1.3
2,860,847	-	ygbK	b2737	0.42	-0.2
2,860,851	+	ygbK	b2737	0.42	+0.1
2,860,895	-	ygbK	b2737	0.46	-1.3
2,860,990	+	ygbK	b2737	0.54	-1.3
2,860,990	+	ygbK	b2737	0.54	+0.3
2,860,997	+	ygbK	b2737	0.55	+0.3
2,860,998	-	ygbK	b2737	0.55	+0.9
2,861,029	-	ygbK	b2737	0.58	+1.7
2,861,044	+	ygbK	b2737	0.59	+1.6
2,861,044	+	ygbK	b2737	0.59	+0.3
2,861,080	+	ygbK	b2737	0.62	-1.5
2,861,111	+	ygbK	b2737	0.65	+0.3
2,861,166	-	ygbK	b2737	0.69	+0.0
2,861,195	+	ygbK	b2737	0.72	-0.4
2,861,301	+	ygbK	b2737	0.81	+2.3
2,861,301	+	ygbK	b2737	0.81	-0.0
2,861,518	+				+0.1
2,861,531	+				-0.1
2,861,531	+				-0.1
2,861,539	-				+0.3
2,861,539	-				+0.9
2,861,551	+				-0.5
2,861,602	-				+1.3
2,861,614	-				-0.7
2,861,614	-				-1.5
2,861,719	-	ygbL	b2738	0.16	+0.8
2,861,766	-	ygbL	b2738	0.24	-0.2
2,861,778	+	ygbL	b2738	0.26	+0.3
2,861,778	+	ygbL	b2738	0.26	+1.5
2,861,832	+	ygbL	b2738	0.34	-1.1
2,861,924	-	ygbL	b2738	0.48	-1.5
2,861,984	-	ygbL	b2738	0.58	+1.3
2,862,001	+	ygbL	b2738	0.60	+0.3
2,862,001	+	ygbL	b2738	0.60	+0.7
2,862,384	-	ygbM	b2739	0.16	+1.0
2,862,439	-	ygbM	b2739	0.23	+0.3
2,862,439	-	ygbM	b2739	0.23	-0.4
2,862,479	-	ygbM	b2739	0.28	+0.1
2,862,511	-	ygbM	b2739	0.33	+1.3