Strain Fitness in Escherichia coli BW25113 around b1651
Experiment: Doxycycline hyclate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Doxycycline hyclate 0.001 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 1,725,072 | + | nemA | b1650 | 0.35 | +1.4 |
| 1,725,075 | - | nemA | b1650 | 0.36 | -1.2 |
| 1,725,075 | - | nemA | b1650 | 0.36 | -0.9 |
| 1,725,118 | - | nemA | b1650 | 0.40 | +1.1 |
| 1,725,233 | - | nemA | b1650 | 0.50 | +0.7 |
| 1,725,233 | - | nemA | b1650 | 0.50 | +0.1 |
| 1,725,403 | + | nemA | b1650 | 0.66 | +0.3 |
| 1,725,437 | + | nemA | b1650 | 0.69 | -0.9 |
| 1,725,754 | + | -0.3 | |||
| 1,725,761 | - | +0.2 | |||
| 1,725,763 | - | -0.2 | |||
| 1,725,763 | - | -1.9 | |||
| 1,725,877 | - | +0.1 | |||
| 1,725,877 | - | +0.7 | |||
| 1,726,040 | - | gloA | b1651 | 0.44 | -1.5 |
| 1,726,072 | - | gloA | b1651 | 0.52 | -2.5 |
| 1,726,092 | + | gloA | b1651 | 0.57 | -1.9 |
| 1,726,185 | - | gloA | b1651 | 0.79 | -1.5 |
| 1,726,185 | - | gloA | b1651 | 0.79 | +1.1 |
Or see this region's nucleotide sequence