Strain Fitness in Escherichia coli BW25113 around b1586

Experiment: Doxycycline hyclate 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.001 mg/ml
1,654,690	+	speG	b1584	0.86	+0.7
1,654,690	+	speG	b1584	0.86	+0.1
1,654,711	+	speG	b1584	0.90	-0.9
1,654,711	+	speG	b1584	0.90	-0.7
1,654,719	-				+0.6
1,654,723	+				+0.1
1,654,723	+				+1.1
1,654,731	-				+0.2
1,654,745	+				+1.1
1,654,745	+				+1.5
1,654,753	-				+1.1
1,654,799	+				+0.1
1,654,807	-				+1.7
1,654,807	-				+0.5
1,654,812	-				+0.1
1,654,812	-				+0.7
1,655,022	-	ynfC	b1585	0.35	+0.8
1,655,058	+	ynfC	b1585	0.40	-0.5
1,655,077	-	ynfC	b1585	0.43	-1.5
1,655,077	-	ynfC	b1585	0.43	-0.5
1,655,102	+	ynfC	b1585	0.47	-0.9
1,655,114	+	ynfC	b1585	0.48	+1.7
1,655,123	-	ynfC	b1585	0.50	+0.4
1,655,123	-	ynfC	b1585	0.50	+1.1
1,655,147	-	ynfC	b1585	0.53	-0.9
1,655,175	-	ynfC	b1585	0.57	-1.3
1,655,199	-	ynfC	b1585	0.60	-0.3
1,655,208	+	ynfC	b1585	0.61	+1.1
1,655,216	-	ynfC	b1585	0.63	+0.5
1,655,394	+	ynfC	b1585	0.88	+0.4
1,655,402	-				+0.1
1,655,402	-	ynfC	b1585	0.89	+1.4
1,655,413	-				+0.1
1,655,428	+				-0.7
1,655,500	-				+0.1
1,655,500	-				+1.4
1,655,626	+	b1586	b1586	0.12	+0.1
1,655,634	-	b1586	b1586	0.15	+1.7
1,655,643	+	b1586	b1586	0.18	+2.1
1,655,645	+	b1586	b1586	0.18	-0.9
1,655,655	+	b1586	b1586	0.22	+0.1
1,655,655	+	b1586	b1586	0.22	-0.9
1,655,786	-	b1586	b1586	0.64	+0.1
1,655,786	-	b1586	b1586	0.64	+0.1
1,655,841	+	b1586	b1586	0.82	+3.4
1,655,858	+	b1586	b1586	0.88	+0.4
1,655,955	-				+1.7
1,656,025	-				+1.5
1,656,291	-				+1.1
1,656,291	-				+0.3
1,656,418	-	ynfE	b1587	0.13	-1.5
1,656,569	-	ynfE	b1587	0.20	-0.2
1,656,673	-	ynfE	b1587	0.24	+1.7
1,656,712	-	ynfE	b1587	0.26	+0.1
1,656,712	-	ynfE	b1587	0.26	-1.5
1,656,800	+	ynfE	b1587	0.29	+0.1
1,656,800	+	ynfE	b1587	0.29	-0.5