Strain Fitness in Escherichia coli BW25113 around b1193

Experiment: Doxycycline hyclate 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.001 mg/ml
1,241,424	+				+0.1
1,241,425	-				+1.5
1,241,433	+				+1.6
1,241,501	+	ldcA	b1192	0.12	+0.1
1,241,572	-	ldcA	b1192	0.20	-0.6
1,241,581	+	ldcA	b1192	0.21	+0.2
1,241,747	+	ldcA	b1192	0.39	+0.2
1,241,936	-	ldcA	b1192	0.60	+1.6
1,241,936	-	ldcA	b1192	0.60	+1.6
1,241,961	-	ldcA	b1192	0.63	+0.2
1,241,961	-	ldcA	b1192	0.63	+2.2
1,241,999	-	ldcA	b1192	0.67	+1.2
1,242,033	+	ldcA	b1192	0.70	+0.9
1,242,208	-	ldcA	b1192	0.90	-0.8
1,242,237	-				+1.3
1,242,284	+				+1.8
1,242,305	-				-0.3
1,242,337	+				+0.8
1,242,355	-				+0.0
1,242,365	-				-0.1
1,242,365	-				+2.2
1,242,465	+	mltE	b1193	0.10	+0.2
1,242,655	+	mltE	b1193	0.41	+0.8
1,243,159	+	ycgR	b1194	0.19	+0.6
1,243,291	-	ycgR	b1194	0.37	-1.4
1,243,291	-	ycgR	b1194	0.37	-2.1
1,243,521	+	ycgR	b1194	0.69	-0.2
1,243,589	+	ycgR	b1194	0.78	-0.8
1,243,637	-	ycgR	b1194	0.84	+0.2
1,243,688	+				+0.2
1,243,722	-				-1.1
1,243,732	+				+0.2
1,243,798	+				+1.3
1,243,864	+				+2.2
1,243,875	+				+0.7
1,243,890	+				+0.9
1,243,893	-				+0.4
1,243,899	+				+0.5
1,243,904	+				+0.2