Strain Fitness in Escherichia coli BW25113 around b0110

Experiment: Doxycycline hyclate 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.001 mg/ml
117,839	+				+0.4
117,856	-	nadC	b0109	0.12	-0.3
117,856	-	nadC	b0109	0.12	+2.0
117,879	-	nadC	b0109	0.14	-0.6
117,879	-	nadC	b0109	0.14	-0.9
117,881	-	nadC	b0109	0.14	+0.4
117,922	-	nadC	b0109	0.19	+0.4
117,922	-	nadC	b0109	0.19	+1.4
118,107	-	nadC	b0109	0.40	+0.5
118,201	+	nadC	b0109	0.50	+0.8
118,230	+	nadC	b0109	0.53	-0.6
118,230	+	nadC	b0109	0.53	+2.7
118,296	+	nadC	b0109	0.61	+0.2
118,355	-	nadC	b0109	0.67	+0.1
118,355	-	nadC	b0109	0.67	+1.4
118,364	+	nadC	b0109	0.68	+0.4
118,382	-	nadC	b0109	0.70	-1.2
118,538	+	nadC	b0109	0.88	+0.4
118,623	+				+0.9
118,631	-				-0.1
118,737	+				+0.5
118,737	+				+0.4
118,781	+				-0.6
118,836	+	ampD	b0110	0.19	+1.1
118,868	+	ampD	b0110	0.24	+2.4
118,868	+	ampD	b0110	0.24	-1.6
118,904	-	ampD	b0110	0.31	+0.1
119,033	-	ampD	b0110	0.54	-1.1
119,101	+	ampD	b0110	0.67	+1.3
119,109	-	ampD	b0110	0.68	-0.2
119,109	-	ampD	b0110	0.68	+0.2
119,117	-	ampD	b0110	0.70	-0.8
119,119	+	ampD	b0110	0.70	+0.8
119,150	-	ampD	b0110	0.76	-0.3
119,150	-	ampD	b0110	0.76	+0.9
119,163	+	ampD	b0110	0.78	+1.3
119,168	-	ampD	b0110	0.79	+2.4
119,191	+	ampD	b0110	0.83	+3.9
119,191	+	ampD	b0110	0.83	+1.1
119,274	+				+0.7
119,339	+				-0.0
119,339	+				-1.6
119,499	-	ampE	b0111	0.25	+0.1
119,499	-	ampE	b0111	0.25	+0.4
119,522	+	ampE	b0111	0.28	-1.6
119,528	-	ampE	b0111	0.29	+0.5
119,555	-	ampE	b0111	0.32	-1.9
119,555	-	ampE	b0111	0.32	+0.4
119,558	-	ampE	b0111	0.32	-1.2
119,567	+	ampE	b0111	0.33	+1.0
119,567	+	ampE	b0111	0.33	-0.2
119,753	-	ampE	b0111	0.55	+0.1
119,755	-	ampE	b0111	0.55	+0.4
119,755	-	ampE	b0111	0.55	+0.1
119,756	+	ampE	b0111	0.56	+0.3
119,772	-	ampE	b0111	0.57	-0.8
119,786	+	ampE	b0111	0.59	-1.6
119,786	+	ampE	b0111	0.59	+0.3
119,799	-	ampE	b0111	0.61	-0.6
119,799	-	ampE	b0111	0.61	-0.1
119,836	-	ampE	b0111	0.65	+1.6
119,836	-	ampE	b0111	0.65	-0.7
119,915	+	ampE	b0111	0.74	+0.4
119,961	+	ampE	b0111	0.80	-0.6
119,961	+	ampE	b0111	0.80	+0.4
119,983	+	ampE	b0111	0.82	-2.2
119,985	-	ampE	b0111	0.82	-0.0
120,006	-	ampE	b0111	0.85	-0.5
120,013	-	ampE	b0111	0.86	+1.4
120,013	-	ampE	b0111	0.86	+3.6
120,014	+	ampE	b0111	0.86	-0.6
120,014	+	ampE	b0111	0.86	+0.6
120,014	+	ampE	b0111	0.86	+1.6
120,014	+	ampE	b0111	0.86	-1.2
120,037	-	ampE	b0111	0.88	+0.4
120,138	-				-0.3
120,139	+				-0.1
120,153	-				+0.4
120,155	+				-0.9
120,237	-				+0.0
120,251	-				+0.9
120,254	+				-1.2
120,266	-				+0.4
120,266	-				-1.6