Strain Fitness in Pseudomonas sp. RS175 around PFR28_05204

Experiment: Adenosine (C) 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Adenosine (C) 10 mM
5,949,204	-		PFR28_05202	0.25	-0.6
5,949,205	+		PFR28_05202	0.25	-0.0
5,949,205	+		PFR28_05202	0.25	-0.7
5,949,206	-		PFR28_05202	0.25	+1.8
5,949,206	-		PFR28_05202	0.25	-1.7
5,949,206	-		PFR28_05202	0.25	-0.1
5,949,206	-		PFR28_05202	0.25	+0.5
5,949,206	-		PFR28_05202	0.25	+0.4
5,949,206	-		PFR28_05202	0.25	-0.5
5,949,209	+		PFR28_05202	0.25	+1.3
5,949,209	+		PFR28_05202	0.25	+0.1
5,949,209	+		PFR28_05202	0.25	+0.0
5,949,259	+		PFR28_05202	0.31	+0.7
5,949,260	-		PFR28_05202	0.31	-0.0
5,949,498	-		PFR28_05202	0.57	-0.4
5,949,498	-		PFR28_05202	0.57	-0.1
5,949,541	+		PFR28_05202	0.62	-0.3
5,949,541	+		PFR28_05202	0.62	+0.0
5,949,541	+		PFR28_05202	0.62	+1.1
5,949,541	+		PFR28_05202	0.62	+0.5
5,949,541	+		PFR28_05202	0.62	+0.0
5,949,541	+		PFR28_05202	0.62	-0.8
5,949,542	-		PFR28_05202	0.62	-1.1
5,949,542	-		PFR28_05202	0.62	-1.3
5,949,603	-		PFR28_05202	0.68	-0.4
5,949,603	-		PFR28_05202	0.68	-0.5
5,949,679	+		PFR28_05202	0.77	-0.7
5,949,679	+		PFR28_05202	0.77	-0.1
5,949,679	+		PFR28_05202	0.77	-1.3
5,949,679	+		PFR28_05202	0.77	-0.6
5,949,680	-		PFR28_05202	0.77	+0.9
5,949,680	-		PFR28_05202	0.77	-0.0
5,949,687	+		PFR28_05202	0.78	+1.7
5,949,687	+		PFR28_05202	0.78	-0.4
5,949,687	+		PFR28_05202	0.78	+0.3
5,949,687	+		PFR28_05202	0.78	-0.2
5,949,688	-		PFR28_05202	0.78	+0.5
5,949,688	-		PFR28_05202	0.78	+0.7
5,949,688	-		PFR28_05202	0.78	-0.2
5,949,688	-		PFR28_05202	0.78	+0.4
5,949,688	-		PFR28_05202	0.78	+2.7
5,949,688	-		PFR28_05202	0.78	-0.9
5,949,688	-		PFR28_05202	0.78	+1.1
5,949,688	-		PFR28_05202	0.78	-0.6
5,949,688	-		PFR28_05202	0.78	+1.8
5,949,688	-		PFR28_05202	0.78	-0.1
5,949,691	+		PFR28_05202	0.78	+1.2
5,949,691	+		PFR28_05202	0.78	-1.2
5,949,691	+		PFR28_05202	0.78	+0.7
5,949,691	+		PFR28_05202	0.78	+0.0
5,949,691	+		PFR28_05202	0.78	-0.9
5,949,691	+		PFR28_05202	0.78	+1.1
5,949,691	+		PFR28_05202	0.78	+0.5
5,949,691	+		PFR28_05202	0.78	+0.1
5,949,691	+		PFR28_05202	0.78	-0.2
5,949,691	+		PFR28_05202	0.78	-1.0
5,949,691	+		PFR28_05202	0.78	+0.0
5,949,691	+		PFR28_05202	0.78	-0.1
5,949,691	+		PFR28_05202	0.78	-0.3
5,949,692	-		PFR28_05202	0.78	-1.3
5,949,692	-		PFR28_05202	0.78	-0.4
5,949,692	-		PFR28_05202	0.78	+0.7
5,949,692	-		PFR28_05202	0.78	-0.3
5,949,692	-		PFR28_05202	0.78	-0.4
5,949,692	-		PFR28_05202	0.78	-1.3
5,949,692	-		PFR28_05202	0.78	+1.5
5,949,692	-		PFR28_05202	0.78	+1.2
5,949,692	-		PFR28_05202	0.78	+0.4
5,949,692	-		PFR28_05202	0.78	-1.2
5,949,692	-		PFR28_05202	0.78	+0.0
5,949,692	-		PFR28_05202	0.78	-0.6
5,949,692	-		PFR28_05202	0.78	-0.7
5,949,692	-		PFR28_05202	0.78	-0.4
5,949,692	-		PFR28_05202	0.78	+0.7
5,949,692	-		PFR28_05202	0.78	+0.1
5,949,692	-		PFR28_05202	0.78	-2.4
5,949,692	-		PFR28_05202	0.78	-0.6
5,949,692	-		PFR28_05202	0.78	+0.9
5,949,692	-		PFR28_05202	0.78	-1.8
5,949,736	+		PFR28_05202	0.83	+0.6
5,949,736	+		PFR28_05202	0.83	+0.1
5,949,737	-		PFR28_05202	0.83	+1.4
5,949,832	+				-0.5
5,949,859	+				+1.4
5,949,859	+				+0.0
5,949,859	+				+0.1
5,949,859	+				-0.1
5,949,859	+				-0.9
5,949,859	+				+0.1
5,949,859	+				+0.8
5,949,860	-				+1.4
5,949,860	-				+0.2
5,949,860	-				-0.9
5,949,865	+				-0.1
5,949,865	+				-0.1
5,949,865	+				+0.1
5,949,865	+				-1.0
5,949,865	+				-0.0
5,949,865	+				+0.1
5,949,865	+				-2.1
5,949,865	+				+0.1
5,949,865	+				-0.4
5,949,865	+				+0.3
5,949,865	+				+0.1
5,949,865	+				+0.4
5,949,865	+				+0.0
5,949,866	-				+0.8
5,949,866	-				+0.6
5,949,866	-				-0.1
5,949,866	-				-0.3
5,949,866	-				-0.1
5,949,866	-				-0.7
5,949,866	-				-0.1
5,949,866	-				+1.0
5,949,866	-				+0.9
5,949,866	-				-0.7
5,949,866	-				+0.3
5,949,866	-				-0.0
5,949,866	-				-0.7
5,949,866	-				-1.1
5,949,866	-				+0.7
5,949,866	-				-0.2
5,949,922	+				+0.1
5,949,923	-				+1.0
5,949,923	-				-1.2
5,949,941	+				-0.3
5,949,942	-				+0.8
5,950,007	+				+0.0
5,950,175	-				+0.8
5,950,175	-				-0.1
5,950,175	-				-0.1
5,950,175	-				+0.0
5,950,175	-				+0.6
5,950,408	-		PFR28_05204	0.16	-0.7
5,950,494	+		PFR28_05204	0.22	-1.2
5,950,495	-		PFR28_05204	0.22	-0.8
5,950,495	-		PFR28_05204	0.22	-0.8
5,950,518	+		PFR28_05204	0.24	-0.4
5,951,018	-		PFR28_05204	0.61	-0.5
5,951,018	-		PFR28_05204	0.61	-2.1
5,951,428	+				-3.2
5,951,428	+				-0.8
5,951,428	+				-1.1
5,951,428	+				-1.3
5,951,429	-				-1.3
5,951,543	+				-0.1
5,951,543	+				-1.1
5,951,543	+				+1.4
5,951,543	+				+0.2
5,951,543	+				-0.5
5,951,544	-				-0.5
5,951,544	-				-1.2
5,951,544	-				-0.4
5,951,544	-				-0.2
5,951,544	-				-0.8
5,951,544	-				-1.0
5,951,544	-				-2.2
5,951,544	-				-0.2
5,951,567	+				-1.7
5,951,567	+				-1.5
5,951,568	-				-1.8
5,951,568	-				-1.0
5,951,568	-				-0.2
5,951,568	-				-0.2
5,951,568	-				+0.7
5,951,568	-				-0.5
5,951,652	+		PFR28_05205	0.19	-0.5
5,951,653	-		PFR28_05205	0.19	-0.2
5,951,653	-		PFR28_05205	0.19	+0.0
5,951,653	-		PFR28_05205	0.19	-0.5
5,951,653	-		PFR28_05205	0.19	+2.1
5,951,958	-		PFR28_05205	0.68	-0.3
5,951,958	-		PFR28_05205	0.68	+0.8
5,951,958	-		PFR28_05205	0.68	-0.6
5,951,958	-		PFR28_05205	0.68	-0.5
5,951,958	-		PFR28_05205	0.68	+0.1
5,952,265	+		PFR28_05206	0.15	-2.5
5,952,265	+		PFR28_05206	0.15	-0.7
5,952,266	-		PFR28_05206	0.15	-1.8
5,952,391	+		PFR28_05206	0.32	-0.3
5,952,391	+		PFR28_05206	0.32	-1.6
5,952,391	+		PFR28_05206	0.32	-0.3
5,952,391	+		PFR28_05206	0.32	-0.5
5,952,391	+		PFR28_05206	0.32	-2.3
5,952,392	-		PFR28_05206	0.32	-0.9
5,952,392	-		PFR28_05206	0.32	-1.1
5,952,392	-		PFR28_05206	0.32	+0.2
5,952,392	-		PFR28_05206	0.32	-0.1
5,952,392	-		PFR28_05206	0.32	-2.2
5,952,392	-		PFR28_05206	0.32	-0.3
5,952,392	-		PFR28_05206	0.32	-1.2
5,952,416	-		PFR28_05206	0.35	-1.1
5,952,416	-		PFR28_05206	0.35	-0.4
5,952,499	+		PFR28_05206	0.47	-1.7
5,952,499	+		PFR28_05206	0.47	+0.2
5,952,499	+		PFR28_05206	0.47	-0.3
5,952,500	-		PFR28_05206	0.47	-0.7
5,952,500	-		PFR28_05206	0.47	+0.3
5,952,508	+		PFR28_05206	0.48	+0.7
5,952,508	+		PFR28_05206	0.48	+0.0
5,952,508	+		PFR28_05206	0.48	-1.2
5,952,508	+		PFR28_05206	0.48	-0.4
5,952,508	+		PFR28_05206	0.48	-0.3
5,952,508	+		PFR28_05206	0.48	-2.0
5,952,508	+		PFR28_05206	0.48	-1.7
5,952,508	+		PFR28_05206	0.48	-1.8
5,952,509	-		PFR28_05206	0.48	+0.2
5,952,509	-		PFR28_05206	0.48	+0.2
5,952,509	-		PFR28_05206	0.48	-1.6
5,952,509	-		PFR28_05206	0.48	-2.0
5,952,509	-		PFR28_05206	0.48	-3.9
5,952,509	-		PFR28_05206	0.48	-1.3
5,952,514	+		PFR28_05206	0.49	-0.0
5,952,514	+		PFR28_05206	0.49	+0.9
5,952,514	+		PFR28_05206	0.49	-0.8
5,952,514	+		PFR28_05206	0.49	-1.8
5,952,514	+		PFR28_05206	0.49	-2.3
5,952,514	+		PFR28_05206	0.49	-0.8
5,952,514	+		PFR28_05206	0.49	+0.1
5,952,514	+		PFR28_05206	0.49	+0.8
5,952,514	+		PFR28_05206	0.49	-0.5
5,952,514	+		PFR28_05206	0.49	-1.3
5,952,514	+		PFR28_05206	0.49	+0.8
5,952,514	+		PFR28_05206	0.49	-1.1
5,952,514	+		PFR28_05206	0.49	+0.1
5,952,515	-		PFR28_05206	0.49	-3.2
5,952,515	-		PFR28_05206	0.49	-0.8
5,952,515	-		PFR28_05206	0.49	-1.7
5,952,515	-		PFR28_05206	0.49	-0.2
5,952,515	-		PFR28_05206	0.49	-2.2
5,952,515	-		PFR28_05206	0.49	-2.6
5,952,515	-		PFR28_05206	0.49	+0.4
5,952,515	-		PFR28_05206	0.49	-2.4
5,952,515	-		PFR28_05206	0.49	-0.4
5,952,515	-		PFR28_05206	0.49	-0.8
5,952,541	+		PFR28_05206	0.52	-2.7
5,952,541	+		PFR28_05206	0.52	-1.7