Strain Fitness in Pseudomonas sp. RS175 around PFR28_04633

Experiment: Adenosine (C) 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Adenosine (C) 10 mM
5,289,010	+		PFR28_04632	0.41	-0.9
5,289,010	+		PFR28_04632	0.41	+0.2
5,289,011	-		PFR28_04632	0.41	-0.5
5,289,011	-		PFR28_04632	0.41	-0.0
5,289,037	+		PFR28_04632	0.43	+0.7
5,289,038	-		PFR28_04632	0.43	-0.9
5,289,116	+		PFR28_04632	0.48	-0.1
5,289,117	-		PFR28_04632	0.48	-1.4
5,289,223	+		PFR28_04632	0.55	+1.4
5,289,223	+		PFR28_04632	0.55	+0.0
5,289,224	-		PFR28_04632	0.55	+0.1
5,289,224	-		PFR28_04632	0.55	-2.3
5,289,301	-		PFR28_04632	0.59	+0.7
5,289,342	+		PFR28_04632	0.62	-0.2
5,289,342	+		PFR28_04632	0.62	+0.7
5,289,343	-		PFR28_04632	0.62	-0.8
5,289,410	+		PFR28_04632	0.66	+0.8
5,289,430	+		PFR28_04632	0.67	+0.4
5,289,430	+		PFR28_04632	0.67	-0.5
5,289,430	+		PFR28_04632	0.67	-1.0
5,289,430	+		PFR28_04632	0.67	-1.9
5,289,430	+		PFR28_04632	0.67	+0.8
5,289,430	+		PFR28_04632	0.67	-0.2
5,289,430	+		PFR28_04632	0.67	-0.1
5,289,430	+		PFR28_04632	0.67	-1.2
5,289,430	+		PFR28_04632	0.67	+0.3
5,289,430	+		PFR28_04632	0.67	-0.3
5,289,430	+		PFR28_04632	0.67	-0.1
5,289,430	+		PFR28_04632	0.67	+0.4
5,289,430	+		PFR28_04632	0.67	+0.0
5,289,430	+		PFR28_04632	0.67	-0.1
5,289,430	+		PFR28_04632	0.67	-0.5
5,289,431	-		PFR28_04632	0.67	-0.5
5,289,431	-		PFR28_04632	0.67	+0.4
5,289,431	-		PFR28_04632	0.67	+0.6
5,289,431	-		PFR28_04632	0.67	+1.9
5,289,431	-		PFR28_04632	0.67	+0.3
5,289,431	-		PFR28_04632	0.67	-0.1
5,289,431	-		PFR28_04632	0.67	+0.6
5,289,431	-		PFR28_04632	0.67	-2.7
5,289,431	-		PFR28_04632	0.67	-0.4
5,289,431	-		PFR28_04632	0.67	+0.7
5,289,431	-		PFR28_04632	0.67	+0.5
5,289,431	-		PFR28_04632	0.67	+0.1
5,289,431	-		PFR28_04632	0.67	-0.5
5,289,431	-		PFR28_04632	0.67	-0.7
5,289,432	+		PFR28_04632	0.67	+0.8
5,289,432	+		PFR28_04632	0.67	+0.4
5,289,432	+		PFR28_04632	0.67	-1.4
5,289,432	+		PFR28_04632	0.67	-1.2
5,289,432	+		PFR28_04632	0.67	-0.1
5,289,432	+		PFR28_04632	0.67	+0.4
5,289,432	+		PFR28_04632	0.67	-0.1
5,289,432	+		PFR28_04632	0.67	+0.6
5,289,432	+		PFR28_04632	0.67	+1.3
5,289,432	+		PFR28_04632	0.67	-1.5
5,289,432	+		PFR28_04632	0.67	-0.1
5,289,432	+		PFR28_04632	0.67	-0.5
5,289,432	+		PFR28_04632	0.67	-0.2
5,289,432	+		PFR28_04632	0.67	-0.4
5,289,432	+		PFR28_04632	0.67	+0.9
5,289,432	+		PFR28_04632	0.67	+0.2
5,289,432	+		PFR28_04632	0.67	+0.4
5,289,432	+		PFR28_04632	0.67	+0.4
5,289,432	+		PFR28_04632	0.67	-0.3
5,289,432	+		PFR28_04632	0.67	-0.2
5,289,432	+		PFR28_04632	0.67	-0.3
5,289,432	+		PFR28_04632	0.67	-0.7
5,289,432	+		PFR28_04632	0.67	-0.0
5,289,432	+		PFR28_04632	0.67	+0.9
5,289,433	-		PFR28_04632	0.68	-1.8
5,289,433	-		PFR28_04632	0.68	-0.6
5,289,433	-		PFR28_04632	0.68	+0.3
5,289,433	-		PFR28_04632	0.68	+0.5
5,289,433	-		PFR28_04632	0.68	-1.3
5,289,433	-		PFR28_04632	0.68	-0.1
5,289,433	-		PFR28_04632	0.68	+0.6
5,289,433	-		PFR28_04632	0.68	-2.9
5,289,433	-		PFR28_04632	0.68	-0.3
5,289,433	-		PFR28_04632	0.68	-0.7
5,289,433	-		PFR28_04632	0.68	-1.1
5,289,433	-		PFR28_04632	0.68	-1.0
5,289,433	-		PFR28_04632	0.68	-0.1
5,289,433	-		PFR28_04632	0.68	+0.2
5,289,433	-		PFR28_04632	0.68	+0.3
5,289,433	-		PFR28_04632	0.68	+0.3
5,289,433	-		PFR28_04632	0.68	-0.7
5,289,433	-		PFR28_04632	0.68	-0.4
5,289,433	-		PFR28_04632	0.68	-0.1
5,289,433	-		PFR28_04632	0.68	-1.0
5,289,433	-		PFR28_04632	0.68	+0.7
5,289,433	-		PFR28_04632	0.68	-0.0
5,289,434	+		PFR28_04632	0.68	+0.3
5,289,434	+		PFR28_04632	0.68	+1.0
5,289,434	+		PFR28_04632	0.68	+0.6
5,289,434	+		PFR28_04632	0.68	-0.2
5,289,434	+		PFR28_04632	0.68	+0.3
5,289,434	+		PFR28_04632	0.68	+0.2
5,289,434	+		PFR28_04632	0.68	-0.1
5,289,435	-		PFR28_04632	0.68	+0.0
5,289,435	-		PFR28_04632	0.68	+0.5
5,289,435	-		PFR28_04632	0.68	+0.3
5,289,435	-		PFR28_04632	0.68	-0.5
5,289,435	-		PFR28_04632	0.68	+0.2
5,289,617	+		PFR28_04632	0.79	-1.7
5,289,618	-		PFR28_04632	0.79	+0.2
5,289,618	-		PFR28_04632	0.79	-2.2
5,289,618	-		PFR28_04632	0.79	-0.9
5,289,618	-		PFR28_04632	0.79	-0.4
5,289,644	-		PFR28_04632	0.81	-0.1
5,289,659	-		PFR28_04632	0.82	-0.1
5,289,659	-		PFR28_04632	0.82	-0.9
5,289,659	-		PFR28_04632	0.82	-1.0
5,289,753	+		PFR28_04632	0.87	+0.5
5,289,753	+		PFR28_04632	0.87	+0.3
5,289,753	+		PFR28_04632	0.87	+0.6
5,289,754	-		PFR28_04632	0.87	-1.0
5,289,754	-		PFR28_04632	0.87	-1.2
5,289,762	+		PFR28_04632	0.88	+0.0
5,289,826	+				+0.8
5,289,827	-				-0.0
5,289,827	-				-0.5
5,289,955	+				+1.1
5,289,955	+				+0.7
5,290,014	-				-2.7
5,290,014	-				-2.3
5,290,014	-				-2.6
5,290,015	+				-1.6
5,290,015	+				-2.3
5,290,015	+				-1.8
5,290,015	+				-1.9
5,290,015	+				-4.4
5,290,015	+				-0.5
5,290,015	+				-3.1
5,290,015	+				-1.4
5,290,015	+				-2.3
5,290,015	+				-3.4
5,290,016	-				-1.4
5,290,016	-				-4.3
5,290,016	-				-4.4
5,290,016	-				-0.9
5,290,016	-				-0.1
5,290,016	-				-0.1
5,290,016	-				-0.3
5,290,016	-				-3.1
5,290,016	-				-2.7
5,290,016	-				-1.1
5,290,016	-				-0.9
5,290,046	-				-2.3
5,290,046	-				-2.5
5,290,046	-				-2.6
5,290,719	-		PFR28_04633	0.40	-1.9
5,290,745	+		PFR28_04633	0.42	-0.6
5,290,745	+		PFR28_04633	0.42	-1.2
5,290,753	+		PFR28_04633	0.42	-2.7
5,290,754	-		PFR28_04633	0.42	-1.9
5,290,754	-		PFR28_04633	0.42	-1.9
5,290,788	-		PFR28_04633	0.44	-2.4
5,291,173	-		PFR28_04633	0.66	-2.7
5,291,220	-		PFR28_04633	0.68	-1.9
5,291,533	+		PFR28_04633	0.86	-2.8
5,291,534	-		PFR28_04633	0.86	-1.4
5,291,534	-		PFR28_04633	0.86	-3.6
5,291,534	-		PFR28_04633	0.86	-2.9
5,291,786	+				-1.8
5,291,786	+				-3.0
5,291,786	+				-0.9
5,291,786	+				-1.4
5,291,786	+				-3.8
5,291,787	-				+0.4
5,291,787	-				-0.5
5,291,787	-				-1.4
5,291,787	-				+0.2
5,291,787	-				+0.2
5,291,787	-				+0.6
5,291,792	-				-2.9
5,291,792	-				+1.3
5,291,792	-				-2.2
5,291,792	-				+0.9
5,291,807	+				+0.1
5,291,807	+				-0.0
5,291,807	+				+1.4
5,291,807	+				+0.3
5,291,807	+				+0.1
5,291,807	+				+0.5
5,291,807	+				+1.0
5,291,808	-				+0.7
5,291,808	-				-0.2
5,291,808	-				+0.2
5,291,808	-				-0.2
5,291,808	-				-0.0
5,291,808	-				+0.4
5,291,808	-				+0.4
5,291,808	-				+0.2
5,291,826	-				+0.1
5,291,899	+				+1.2
5,291,899	+				+0.8
5,291,899	+				+1.3
5,291,899	+				+0.9
5,291,899	+				+1.3
5,291,899	+				+0.6
5,291,899	+				-0.9
5,291,899	+				+0.4
5,291,899	+				+1.2
5,291,899	+				+0.1
5,291,899	+				-0.6
5,291,899	+				+1.5
5,291,900	-				-0.3
5,291,900	-				-0.8
5,291,900	-				-2.1
5,292,076	+		PFR28_04634	0.21	-2.4
5,292,076	+		PFR28_04634	0.21	+0.3
5,292,076	+		PFR28_04634	0.21	+1.8
5,292,076	+		PFR28_04634	0.21	+0.4
5,292,076	+		PFR28_04634	0.21	+0.4
5,292,076	+		PFR28_04634	0.21	-0.4
5,292,076	+		PFR28_04634	0.21	+1.0
5,292,077	-		PFR28_04634	0.21	+0.5
5,292,125	+		PFR28_04634	0.24	+1.8
5,292,125	+		PFR28_04634	0.24	+0.7
5,292,125	+		PFR28_04634	0.24	+0.2
5,292,125	+		PFR28_04634	0.24	+0.6
5,292,125	+		PFR28_04634	0.24	-0.6
5,292,125	+		PFR28_04634	0.24	+1.7
5,292,125	+		PFR28_04634	0.24	-0.2
5,292,126	-		PFR28_04634	0.24	+0.1
5,292,126	-		PFR28_04634	0.24	+1.1
5,292,126	-		PFR28_04634	0.24	-0.7
5,292,171	+		PFR28_04634	0.28	+1.1
5,292,172	-		PFR28_04634	0.28	+0.4
5,292,172	-		PFR28_04634	0.28	-0.1
5,292,172	-		PFR28_04634	0.28	-2.7
5,292,228	-		PFR28_04634	0.32	+0.6
5,292,341	+		PFR28_04634	0.40	+0.7
5,292,603	+		PFR28_04634	0.60	+1.0
5,292,603	+		PFR28_04634	0.60	+1.7
5,292,766	+		PFR28_04634	0.72	+1.5
5,292,766	+		PFR28_04634	0.72	+0.8
5,292,766	+		PFR28_04634	0.72	-0.6
5,292,766	+		PFR28_04634	0.72	+0.2
5,292,766	+		PFR28_04634	0.72	+0.7
5,292,767	-		PFR28_04634	0.72	+1.1
5,292,767	-		PFR28_04634	0.72	+0.4
5,292,767	-		PFR28_04634	0.72	-0.2