Strain Fitness in Pseudomonas sp. RS175 around PFR28_03808

Experiment: Adenosine (C) 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Adenosine (C) 10 mM
4,381,161	-		PFR28_03806	0.66	-0.0
4,381,229	+		PFR28_03806	0.78	-0.5
4,381,386	-				-1.5
4,381,386	-				+0.6
4,381,386	-				-0.5
4,381,388	+				-0.1
4,381,388	+				+2.3
4,381,388	+				-0.5
4,381,388	+				+0.3
4,381,388	+				-0.2
4,381,388	+				+0.7
4,381,389	-				+0.8
4,381,389	-				-0.5
4,381,389	-				+0.5
4,381,480	+				-2.6
4,381,480	+				+0.0
4,381,480	+				-1.2
4,381,480	+				+0.6
4,381,480	+				+0.5
4,381,481	-				+0.2
4,381,481	-				+1.4
4,381,481	-				-0.6
4,381,481	-				-0.2
4,381,481	-				+0.6
4,381,489	+				+0.5
4,381,489	+				-0.6
4,381,489	+				+0.2
4,381,489	+				+0.2
4,381,489	+				-0.5
4,381,489	+				-1.1
4,381,489	+				-0.0
4,381,490	-				+0.1
4,381,490	-				+0.5
4,381,490	-				+0.1
4,381,490	-				+1.4
4,381,490	-				+1.2
4,381,490	-				-0.1
4,381,490	-				-0.7
4,381,490	-				+0.1
4,381,490	-				+0.1
4,381,582	+		PFR28_03807	0.23	-0.6
4,381,582	+		PFR28_03807	0.23	+0.1
4,381,582	+		PFR28_03807	0.23	+0.4
4,381,582	+		PFR28_03807	0.23	+1.0
4,381,582	+		PFR28_03807	0.23	-0.1
4,381,583	-		PFR28_03807	0.23	+1.4
4,381,583	-		PFR28_03807	0.23	+0.3
4,381,583	-		PFR28_03807	0.23	-2.2
4,381,583	-		PFR28_03807	0.23	+0.7
4,381,583	-		PFR28_03807	0.23	-0.5
4,381,583	-		PFR28_03807	0.23	+0.5
4,381,583	-		PFR28_03807	0.23	-0.7
4,381,588	+		PFR28_03807	0.24	+0.0
4,381,588	+		PFR28_03807	0.24	-0.3
4,381,639	+		PFR28_03807	0.35	+1.2
4,381,639	+		PFR28_03807	0.35	+0.0
4,381,639	+		PFR28_03807	0.35	-1.3
4,381,639	+		PFR28_03807	0.35	-0.4
4,381,640	-		PFR28_03807	0.35	+0.2
4,381,640	-		PFR28_03807	0.35	-1.8
4,381,726	+		PFR28_03807	0.54	+0.3
4,381,726	+		PFR28_03807	0.54	-0.2
4,381,727	-		PFR28_03807	0.54	-3.1
4,381,727	-		PFR28_03807	0.54	-0.6
4,381,727	-		PFR28_03807	0.54	-1.4
4,381,727	-		PFR28_03807	0.54	+0.1
4,381,784	+		PFR28_03807	0.67	+0.4
4,381,934	+				-1.1
4,381,934	+				+0.5
4,381,960	+				-1.5
4,381,971	+				-1.7
4,381,971	+				+0.1
4,381,972	-				-2.5
4,381,972	-				+2.1
4,382,009	-				+1.5
4,382,025	+				-0.7
4,382,026	-				+0.3
4,382,026	-				+0.5
4,382,026	-				-0.2
4,382,026	-				+0.2
4,382,026	-				+0.3
4,382,102	+				+0.5
4,382,102	+				-0.9
4,382,102	+				+1.8
4,382,102	+				+0.0
4,382,102	+				-0.1
4,382,103	-				+0.5
4,382,103	-				-1.1
4,382,103	-				+1.0
4,382,103	-				+0.2
4,382,103	-				+0.0
4,382,229	+				-0.0
4,382,229	+				-0.3
4,382,229	+				+2.0
4,382,229	+				+0.3
4,382,229	+				+0.4
4,382,229	+				-0.8
4,382,229	+				+1.0
4,382,229	+				-1.0
4,382,229	+				-0.6
4,382,229	+				+0.2
4,382,229	+				-1.8
4,382,229	+				-0.0
4,382,230	-				+1.7
4,382,230	-				-0.4
4,382,230	-				+0.7
4,382,230	-				-0.6
4,382,230	-				+0.4
4,382,230	-				+0.3
4,382,230	-				-0.1
4,382,230	-				+0.1
4,382,397	+		PFR28_03808	0.20	-0.6
4,382,397	+		PFR28_03808	0.20	-0.8
4,382,397	+		PFR28_03808	0.20	+0.2
4,382,397	+		PFR28_03808	0.20	-0.6
4,382,397	+		PFR28_03808	0.20	-0.2
4,382,397	+		PFR28_03808	0.20	-0.0
4,382,397	+		PFR28_03808	0.20	+0.2
4,382,398	-		PFR28_03808	0.20	-0.3
4,382,398	-		PFR28_03808	0.20	+1.0
4,382,398	-		PFR28_03808	0.20	+0.5
4,382,398	-		PFR28_03808	0.20	-0.5
4,382,399	+		PFR28_03808	0.20	-0.5
4,382,399	+		PFR28_03808	0.20	+0.8
4,382,399	+		PFR28_03808	0.20	-0.2
4,382,399	+		PFR28_03808	0.20	+0.5
4,382,399	+		PFR28_03808	0.20	-0.7
4,382,399	+		PFR28_03808	0.20	-1.6
4,382,399	+		PFR28_03808	0.20	-0.1
4,382,399	+		PFR28_03808	0.20	+0.0
4,382,399	+		PFR28_03808	0.20	-0.0
4,382,399	+		PFR28_03808	0.20	+1.2
4,382,399	+		PFR28_03808	0.20	+0.4
4,382,399	+		PFR28_03808	0.20	+0.5
4,382,399	+		PFR28_03808	0.20	+0.5
4,382,399	+		PFR28_03808	0.20	+0.2
4,382,399	+		PFR28_03808	0.20	-0.8
4,382,400	-		PFR28_03808	0.20	-1.0
4,382,400	-		PFR28_03808	0.20	+1.4
4,382,400	-		PFR28_03808	0.20	-0.7
4,382,400	-		PFR28_03808	0.20	+0.2
4,382,400	-		PFR28_03808	0.20	-0.7
4,382,400	-		PFR28_03808	0.20	-0.9
4,382,400	-		PFR28_03808	0.20	+1.1
4,382,400	-		PFR28_03808	0.20	+0.5
4,382,400	-		PFR28_03808	0.20	-1.0
4,382,400	-		PFR28_03808	0.20	+0.5
4,382,410	+		PFR28_03808	0.21	-0.1
4,382,410	+		PFR28_03808	0.21	-0.1
4,382,411	-		PFR28_03808	0.21	+0.4
4,382,411	-		PFR28_03808	0.21	-0.5
4,382,411	-		PFR28_03808	0.21	+0.0
4,382,423	+		PFR28_03808	0.22	+1.5
4,382,423	+		PFR28_03808	0.22	+0.9
4,382,423	+		PFR28_03808	0.22	+0.2
4,382,424	-		PFR28_03808	0.22	-0.5
4,382,424	-		PFR28_03808	0.22	-1.2
4,382,424	-		PFR28_03808	0.22	+0.1
4,383,045	+		PFR28_03808	0.70	-0.5
4,383,045	+		PFR28_03808	0.70	+0.3
4,383,045	+		PFR28_03808	0.70	-0.5
4,383,045	+		PFR28_03808	0.70	+0.9
4,383,046	-		PFR28_03808	0.70	+1.7
4,383,046	-		PFR28_03808	0.70	+0.4
4,383,046	-		PFR28_03808	0.70	-0.0
4,383,046	-		PFR28_03808	0.70	+0.6
4,383,046	-		PFR28_03808	0.70	-0.6
4,383,046	-		PFR28_03808	0.70	+1.0
4,383,291	+		PFR28_03808	0.89	-1.5
4,383,291	+		PFR28_03808	0.89	-0.2
4,383,291	+		PFR28_03808	0.89	+1.1
4,383,291	+		PFR28_03808	0.89	+0.7
4,383,602	+		PFR28_03809	0.16	+0.5
4,383,603	-		PFR28_03809	0.16	+0.7
4,383,733	+		PFR28_03809	0.28	+1.0
4,383,733	+		PFR28_03809	0.28	+0.4
4,383,733	+		PFR28_03809	0.28	+1.7
4,383,733	+		PFR28_03809	0.28	-1.2
4,383,734	-		PFR28_03809	0.28	+0.1
4,383,734	-		PFR28_03809	0.28	-1.3
4,383,734	-		PFR28_03809	0.28	+0.5
4,383,734	-		PFR28_03809	0.28	-1.2
4,383,795	-		PFR28_03809	0.34	+1.1
4,383,795	-		PFR28_03809	0.34	+0.5
4,383,908	+		PFR28_03809	0.44	+0.3
4,383,908	+		PFR28_03809	0.44	+1.1
4,383,908	+		PFR28_03809	0.44	+0.4
4,383,908	+		PFR28_03809	0.44	-0.9
4,383,908	+		PFR28_03809	0.44	+0.2
4,383,908	+		PFR28_03809	0.44	+1.0
4,383,908	+		PFR28_03809	0.44	-0.1
4,383,908	+		PFR28_03809	0.44	+0.5
4,383,908	+		PFR28_03809	0.44	+0.2
4,383,908	+		PFR28_03809	0.44	-0.1
4,383,908	+		PFR28_03809	0.44	+0.3
4,383,908	+		PFR28_03809	0.44	-0.6
4,383,909	-		PFR28_03809	0.44	+0.6
4,383,909	-		PFR28_03809	0.44	+0.6
4,383,909	-		PFR28_03809	0.44	-0.8
4,383,909	-		PFR28_03809	0.44	-0.9
4,383,909	-		PFR28_03809	0.44	+0.3
4,383,909	-		PFR28_03809	0.44	+0.3
4,383,909	-		PFR28_03809	0.44	-0.4
4,383,909	-		PFR28_03809	0.44	-0.7
4,383,909	-		PFR28_03809	0.44	-1.9
4,383,909	-		PFR28_03809	0.44	+0.4
4,383,941	-		PFR28_03809	0.47	+1.7
4,384,019	+		PFR28_03809	0.54	+0.2
4,384,019	+		PFR28_03809	0.54	+1.7
4,384,019	+		PFR28_03809	0.54	-1.4
4,384,019	+		PFR28_03809	0.54	+0.9
4,384,019	+		PFR28_03809	0.54	-0.5
4,384,020	-		PFR28_03809	0.55	-0.1
4,384,020	-		PFR28_03809	0.55	-0.7
4,384,020	-		PFR28_03809	0.55	-0.2
4,384,061	+		PFR28_03809	0.58	-0.4
4,384,061	+		PFR28_03809	0.58	-1.8
4,384,062	-		PFR28_03809	0.58	+0.4
4,384,062	-		PFR28_03809	0.58	-0.5
4,384,062	-		PFR28_03809	0.58	+1.2
4,384,281	-		PFR28_03809	0.79	-0.4
4,384,281	-		PFR28_03809	0.79	+0.2
4,384,370	+		PFR28_03809	0.87	-0.3
4,384,370	+		PFR28_03809	0.87	+1.2
4,384,370	+		PFR28_03809	0.87	+0.7
4,384,370	+		PFR28_03809	0.87	+1.3
4,384,370	+		PFR28_03809	0.87	-0.7
4,384,370	+		PFR28_03809	0.87	-0.2
4,384,370	+		PFR28_03809	0.87	+0.4
4,384,370	+		PFR28_03809	0.87	+0.4
4,384,370	+		PFR28_03809	0.87	+0.2
4,384,370	+		PFR28_03809	0.87	+0.1
4,384,371	-		PFR28_03809	0.87	+0.2
4,384,371	-		PFR28_03809	0.87	+0.0
4,384,371	-		PFR28_03809	0.87	-0.5
4,384,371	-		PFR28_03809	0.87	-0.1
4,384,371	-		PFR28_03809	0.87	+0.5
4,384,371	-		PFR28_03809	0.87	-0.2
4,384,371	-		PFR28_03809	0.87	-0.5
4,384,371	-		PFR28_03809	0.87	+0.3
4,384,371	-		PFR28_03809	0.87	-0.3
4,384,371	-		PFR28_03809	0.87	+0.8