Strain Fitness in Pseudomonas sp. RS175 around PFR28_01209

Experiment: Adenosine (C) 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Adenosine (C) 10 mM
1,320,492	+		PFR28_01208	0.27	+0.3
1,320,492	+		PFR28_01208	0.27	-0.1
1,320,492	+		PFR28_01208	0.27	+2.8
1,320,492	+		PFR28_01208	0.27	-1.2
1,320,492	+		PFR28_01208	0.27	-2.2
1,320,492	+		PFR28_01208	0.27	+0.2
1,320,493	-		PFR28_01208	0.27	+0.3
1,320,493	-		PFR28_01208	0.27	+1.1
1,320,493	-		PFR28_01208	0.27	+0.8
1,320,493	-		PFR28_01208	0.27	+1.2
1,320,493	-		PFR28_01208	0.27	-0.5
1,320,493	-		PFR28_01208	0.27	+1.0
1,320,493	-		PFR28_01208	0.27	-0.3
1,320,642	+		PFR28_01208	0.45	+1.0
1,320,642	+		PFR28_01208	0.45	+0.4
1,320,642	+		PFR28_01208	0.45	+0.1
1,320,642	+		PFR28_01208	0.45	+0.3
1,320,642	+		PFR28_01208	0.45	+0.6
1,320,642	+		PFR28_01208	0.45	+1.3
1,320,643	-		PFR28_01208	0.45	+0.1
1,320,643	-		PFR28_01208	0.45	+1.4
1,320,643	-		PFR28_01208	0.45	+0.9
1,320,643	-		PFR28_01208	0.45	+0.5
1,320,643	-		PFR28_01208	0.45	+0.1
1,320,643	-		PFR28_01208	0.45	-0.8
1,320,643	-		PFR28_01208	0.45	+0.5
1,320,643	-		PFR28_01208	0.45	+0.3
1,320,643	-		PFR28_01208	0.45	+0.5
1,320,643	-		PFR28_01208	0.45	+0.2
1,320,644	+		PFR28_01208	0.45	-1.2
1,320,645	-		PFR28_01208	0.45	-0.2
1,320,645	-		PFR28_01208	0.45	+0.0
1,320,645	-		PFR28_01208	0.45	+0.6
1,320,759	+		PFR28_01208	0.59	+0.1
1,320,759	+		PFR28_01208	0.59	+2.3
1,320,760	-		PFR28_01208	0.59	-0.0
1,320,801	+		PFR28_01208	0.64	+0.5
1,320,801	+		PFR28_01208	0.64	-1.3
1,320,801	+		PFR28_01208	0.64	-1.5
1,320,801	+		PFR28_01208	0.64	-0.4
1,320,802	-		PFR28_01208	0.65	-0.3
1,320,802	-		PFR28_01208	0.65	+0.3
1,320,802	-		PFR28_01208	0.65	-0.6
1,320,837	+		PFR28_01208	0.69	-0.6
1,320,838	-		PFR28_01208	0.69	-1.6
1,320,855	+		PFR28_01208	0.71	-0.0
1,320,855	+		PFR28_01208	0.71	-0.0
1,320,855	+		PFR28_01208	0.71	+0.1
1,320,855	+		PFR28_01208	0.71	+0.3
1,320,856	-		PFR28_01208	0.71	+0.9
1,320,948	+		PFR28_01208	0.82	-0.0
1,320,948	+		PFR28_01208	0.82	-0.4
1,320,948	+		PFR28_01208	0.82	+0.5
1,320,948	+		PFR28_01208	0.82	+0.6
1,320,949	-		PFR28_01208	0.83	+0.2
1,320,949	-		PFR28_01208	0.83	-0.7
1,320,949	-		PFR28_01208	0.83	-1.3
1,320,949	-		PFR28_01208	0.83	-0.2
1,320,949	-		PFR28_01208	0.83	-0.3
1,321,089	+				+0.6
1,321,089	+				+0.3
1,321,089	+				-0.7
1,321,089	+				+0.4
1,321,089	+				+0.5
1,321,089	+				-0.1
1,321,090	-				+1.0
1,321,090	-				+0.5
1,321,090	-				-0.4
1,321,178	+				-0.3
1,321,178	+				+0.0
1,321,179	-				-0.3
1,321,179	-				+0.3
1,321,179	-				-1.2
1,321,359	-				-0.4
1,321,371	+				-0.2
1,321,371	+				+0.5
1,321,372	-				-0.0
1,321,372	-				-0.5
1,321,460	+				-0.4
1,321,460	+				-0.4
1,321,494	+				-1.1
1,321,494	+				-1.1
1,321,494	+				-0.7
1,321,494	+				+0.9
1,321,494	+				-2.2
1,321,494	+				-0.6
1,321,495	-				+0.2
1,321,495	-				+0.7
1,321,495	-				-0.0
1,321,495	-				-0.3
1,321,495	-				-0.6
1,321,601	+		PFR28_01209	0.13	+0.1
1,321,664	-		PFR28_01209	0.17	+0.1
1,321,963	+		PFR28_01209	0.37	-1.0
1,321,963	+		PFR28_01209	0.37	-1.1
1,321,964	-		PFR28_01209	0.37	-1.8
1,321,964	-		PFR28_01209	0.37	-0.5
1,322,230	+		PFR28_01209	0.55	+0.3
1,322,230	+		PFR28_01209	0.55	-0.6
1,322,231	-		PFR28_01209	0.55	+0.4
1,322,231	-		PFR28_01209	0.55	-0.3
1,322,231	-		PFR28_01209	0.55	+0.3
1,322,231	-		PFR28_01209	0.55	+0.1
1,322,607	+		PFR28_01209	0.79	-0.5
1,322,607	+		PFR28_01209	0.79	-0.3
1,322,607	+		PFR28_01209	0.79	+2.0
1,322,607	+		PFR28_01209	0.79	+1.1
1,322,608	-		PFR28_01209	0.80	-0.9
1,322,608	-		PFR28_01209	0.80	+0.0
1,322,608	-		PFR28_01209	0.80	+0.7
1,322,800	-				+1.5
1,322,929	+				+0.3
1,322,929	+				+0.0
1,322,929	+				-0.3
1,322,930	-				+1.0
1,322,930	-				+0.4
1,322,930	-				+0.7
1,323,009	-				-0.7
1,323,029	+				-0.3
1,323,029	+				-0.7
1,323,030	-		PFR28_01210	0.10	+0.4
1,323,032	+		PFR28_01210	0.11	-0.4
1,323,032	+		PFR28_01210	0.11	-1.5
1,323,032	+		PFR28_01210	0.11	-1.2
1,323,032	+		PFR28_01210	0.11	-0.7
1,323,033	-		PFR28_01210	0.11	+0.5
1,323,033	-		PFR28_01210	0.11	-0.9
1,323,033	-		PFR28_01210	0.11	-0.7
1,323,033	-		PFR28_01210	0.11	-1.8
1,323,035	+		PFR28_01210	0.11	+0.2
1,323,035	+		PFR28_01210	0.11	-0.0
1,323,053	+		PFR28_01210	0.17	+0.3
1,323,057	-		PFR28_01210	0.18	+0.2
1,323,057	-		PFR28_01210	0.18	-1.6
1,323,057	-		PFR28_01210	0.18	-1.0
1,323,057	-		PFR28_01210	0.18	+0.1
1,323,057	-		PFR28_01210	0.18	-1.2
1,323,057	-		PFR28_01210	0.18	+0.5
1,323,057	-		PFR28_01210	0.18	+0.8
1,323,077	+		PFR28_01210	0.23	+1.1
1,323,077	+		PFR28_01210	0.23	+1.5
1,323,077	+		PFR28_01210	0.23	-1.0
1,323,077	+		PFR28_01210	0.23	+0.1
1,323,077	+		PFR28_01210	0.23	-0.3
1,323,077	+		PFR28_01210	0.23	-1.5
1,323,077	+		PFR28_01210	0.23	+0.4
1,323,078	-		PFR28_01210	0.24	+0.6
1,323,078	-		PFR28_01210	0.24	+0.7
1,323,078	-		PFR28_01210	0.24	-1.0
1,323,078	-		PFR28_01210	0.24	+0.2
1,323,078	-		PFR28_01210	0.24	+1.1
1,323,078	-		PFR28_01210	0.24	-0.9
1,323,078	-		PFR28_01210	0.24	+0.7
1,323,078	-		PFR28_01210	0.24	+0.5
1,323,078	-		PFR28_01210	0.24	+0.5
1,323,078	-		PFR28_01210	0.24	+0.5
1,323,078	-		PFR28_01210	0.24	-0.4
1,323,078	-		PFR28_01210	0.24	+1.1
1,323,091	+		PFR28_01210	0.27	-2.2
1,323,091	+		PFR28_01210	0.27	+0.5
1,323,091	+		PFR28_01210	0.27	-0.0
1,323,091	+		PFR28_01210	0.27	+0.1
1,323,091	+		PFR28_01210	0.27	+0.3
1,323,091	+		PFR28_01210	0.27	-0.2
1,323,091	+		PFR28_01210	0.27	+0.0
1,323,091	+		PFR28_01210	0.27	+0.5
1,323,091	+		PFR28_01210	0.27	-0.0
1,323,091	+		PFR28_01210	0.27	-2.3
1,323,092	-		PFR28_01210	0.28	-0.5
1,323,092	-		PFR28_01210	0.28	+0.4
1,323,092	-		PFR28_01210	0.28	-0.0
1,323,093	+		PFR28_01210	0.28	-0.9
1,323,093	+		PFR28_01210	0.28	+1.0
1,323,093	+		PFR28_01210	0.28	+0.2
1,323,093	+		PFR28_01210	0.28	+0.8
1,323,094	-		PFR28_01210	0.28	-0.6
1,323,094	-		PFR28_01210	0.28	-0.3
1,323,095	+		PFR28_01210	0.28	+0.1
1,323,095	+		PFR28_01210	0.28	-1.2
1,323,095	+		PFR28_01210	0.28	+0.3
1,323,095	+		PFR28_01210	0.28	+0.1
1,323,095	+		PFR28_01210	0.28	-0.9
1,323,095	+		PFR28_01210	0.28	-0.3
1,323,095	+		PFR28_01210	0.28	-0.2
1,323,095	+		PFR28_01210	0.28	-1.0
1,323,095	+		PFR28_01210	0.28	-0.1
1,323,095	+		PFR28_01210	0.28	+0.6
1,323,095	+		PFR28_01210	0.28	-1.0
1,323,095	+		PFR28_01210	0.28	-0.0
1,323,095	+		PFR28_01210	0.28	-0.9
1,323,095	+		PFR28_01210	0.28	+0.2
1,323,095	+		PFR28_01210	0.28	+0.0
1,323,095	+		PFR28_01210	0.28	+2.1
1,323,095	+		PFR28_01210	0.28	-0.1
1,323,095	+		PFR28_01210	0.28	-0.7
1,323,096	-		PFR28_01210	0.29	-1.5
1,323,096	-		PFR28_01210	0.29	-0.4
1,323,096	-		PFR28_01210	0.29	+0.4
1,323,096	-		PFR28_01210	0.29	+1.2
1,323,096	-		PFR28_01210	0.29	+0.9
1,323,096	-		PFR28_01210	0.29	-0.0
1,323,096	-		PFR28_01210	0.29	-0.2
1,323,096	-		PFR28_01210	0.29	+1.4
1,323,096	-		PFR28_01210	0.29	-0.2
1,323,096	-		PFR28_01210	0.29	-0.8
1,323,096	-		PFR28_01210	0.29	-0.3
1,323,096	-		PFR28_01210	0.29	+2.2
1,323,096	-		PFR28_01210	0.29	+0.3
1,323,096	-		PFR28_01210	0.29	+0.0
1,323,096	-		PFR28_01210	0.29	-1.0
1,323,096	-		PFR28_01210	0.29	-1.9
1,323,114	-		PFR28_01210	0.34	-0.7
1,323,116	+		PFR28_01210	0.34	-2.0
1,323,116	+		PFR28_01210	0.34	+0.4
1,323,116	+		PFR28_01210	0.34	-0.5
1,323,117	-		PFR28_01210	0.35	-1.3
1,323,117	-		PFR28_01210	0.35	+0.2
1,323,136	+		PFR28_01210	0.40	+0.5
1,323,136	+		PFR28_01210	0.40	+0.2
1,323,136	+		PFR28_01210	0.40	+0.4
1,323,136	+		PFR28_01210	0.40	-0.4
1,323,137	-		PFR28_01210	0.40	-0.9
1,323,137	-		PFR28_01210	0.40	+0.7
1,323,137	-		PFR28_01210	0.40	+0.3
1,323,137	-		PFR28_01210	0.40	-1.3
1,323,137	-		PFR28_01210	0.40	-0.8
1,323,137	-		PFR28_01210	0.40	+1.0
1,323,137	-		PFR28_01210	0.40	-0.0
1,323,141	-		PFR28_01210	0.42	+0.7
1,323,141	-		PFR28_01210	0.42	+1.4
1,323,161	+		PFR28_01210	0.47	+0.9
1,323,161	+		PFR28_01210	0.47	-3.1
1,323,162	-		PFR28_01210	0.48	-1.5
1,323,179	+		PFR28_01210	0.52	+0.7
1,323,179	+		PFR28_01210	0.52	+0.4
1,323,179	+		PFR28_01210	0.52	-0.1
1,323,179	+		PFR28_01210	0.52	-0.4
1,323,179	+		PFR28_01210	0.52	+0.2
1,323,179	+		PFR28_01210	0.52	-0.0
1,323,179	+		PFR28_01210	0.52	-1.3
1,323,179	+		PFR28_01210	0.52	+0.5
1,323,180	-		PFR28_01210	0.53	+0.4
1,323,180	-		PFR28_01210	0.53	-0.3
1,323,180	-		PFR28_01210	0.53	+0.1
1,323,180	-		PFR28_01210	0.53	-0.0
1,323,180	-		PFR28_01210	0.53	-1.5
1,323,180	-		PFR28_01210	0.53	-0.9
1,323,180	-		PFR28_01210	0.53	+0.2
1,323,180	-		PFR28_01210	0.53	-2.0
1,323,180	-		PFR28_01210	0.53	+0.5
1,323,411	-				+0.2
1,323,411	-				-0.3
1,323,460	+				-0.3
1,323,460	+				-0.3
1,323,460	+				-0.2
1,323,460	+				-0.5
1,323,461	-				-0.7
1,323,461	-				+1.5
1,323,461	-				+0.1
1,323,467	+				+3.5
1,323,468	-				+0.3
1,323,603	-				+2.0
1,323,603	-				+0.5
1,323,603	-				+1.3
1,323,612	+		PFR28_01211	0.11	-0.5
1,323,612	+		PFR28_01211	0.11	-0.6
1,323,612	+		PFR28_01211	0.11	-0.3
1,323,612	+		PFR28_01211	0.11	-2.3
1,323,613	-		PFR28_01211	0.11	-2.6
1,323,613	-		PFR28_01211	0.11	-0.5
1,323,613	-		PFR28_01211	0.11	+1.0
1,323,613	-		PFR28_01211	0.11	+0.3
1,323,613	-		PFR28_01211	0.11	+0.4
1,323,636	+		PFR28_01211	0.14	-0.6
1,323,637	-		PFR28_01211	0.14	+0.3
1,323,639	+		PFR28_01211	0.14	-0.4
1,323,639	+		PFR28_01211	0.14	+0.3
1,323,640	-		PFR28_01211	0.14	-0.8
1,323,640	-		PFR28_01211	0.14	-0.1
1,323,640	-		PFR28_01211	0.14	-0.3
1,323,640	-		PFR28_01211	0.14	+1.5
1,323,640	-		PFR28_01211	0.14	+1.0
1,323,640	-		PFR28_01211	0.14	+1.0
1,323,640	-		PFR28_01211	0.14	+0.1
1,323,640	-		PFR28_01211	0.14	-0.5
1,323,794	+		PFR28_01211	0.33	+0.8
1,323,795	-		PFR28_01211	0.33	-0.3
1,323,795	-		PFR28_01211	0.33	+0.6
1,323,806	+		PFR28_01211	0.35	-0.0
1,323,806	+		PFR28_01211	0.35	-0.3
1,323,828	+		PFR28_01211	0.37	-0.0
1,323,828	+		PFR28_01211	0.37	+0.3
1,323,829	-		PFR28_01211	0.37	+1.1
1,323,829	-		PFR28_01211	0.37	-0.6
1,323,829	-		PFR28_01211	0.37	-0.2
1,323,829	-		PFR28_01211	0.37	+0.1
1,323,840	+		PFR28_01211	0.39	+1.2
1,323,840	+		PFR28_01211	0.39	+0.8
1,323,841	-		PFR28_01211	0.39	-0.2
1,323,841	-		PFR28_01211	0.39	+0.3
1,323,841	-		PFR28_01211	0.39	-0.9
1,323,841	-		PFR28_01211	0.39	+0.8
1,323,841	-		PFR28_01211	0.39	-0.4