Experiment: m.b. D-Cycloserine 0.064 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_4683 and Echvi_4684 overlap by 4 nucleotides
Echvi_4683: Echvi_4683 - Methylmalonyl-CoA mutase, N-terminal domain/subunit, at 5,604,588 to 5,606,645
_4683
Echvi_4684: Echvi_4684 - Methylmalonyl-CoA mutase, N-terminal domain/subunit, at 5,606,642 to 5,607,868
_4684
Position (kb)
5606
5607
5608 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 5605.658 kb on + strand, within Echvi_4683 at 5605.724 kb on + strand, within Echvi_4683 at 5605.954 kb on + strand, within Echvi_4683 at 5605.954 kb on + strand, within Echvi_4683 at 5605.977 kb on - strand, within Echvi_4683 at 5606.018 kb on + strand, within Echvi_4683 at 5606.018 kb on + strand, within Echvi_4683 at 5606.019 kb on - strand, within Echvi_4683 at 5606.019 kb on - strand, within Echvi_4683 at 5606.117 kb on - strand, within Echvi_4683 at 5606.120 kb on + strand, within Echvi_4683 at 5606.120 kb on + strand, within Echvi_4683 at 5606.120 kb on + strand, within Echvi_4683 at 5606.121 kb on - strand, within Echvi_4683 at 5606.122 kb on + strand, within Echvi_4683 at 5606.122 kb on + strand, within Echvi_4683 at 5606.122 kb on + strand, within Echvi_4683 at 5606.122 kb on + strand, within Echvi_4683 at 5606.122 kb on + strand, within Echvi_4683 at 5606.123 kb on - strand, within Echvi_4683 at 5606.123 kb on - strand, within Echvi_4683 at 5606.123 kb on - strand, within Echvi_4683 at 5606.123 kb on - strand, within Echvi_4683 at 5606.123 kb on - strand, within Echvi_4683 at 5606.126 kb on + strand, within Echvi_4683 at 5606.216 kb on + strand, within Echvi_4683 at 5606.216 kb on + strand, within Echvi_4683 at 5606.218 kb on + strand, within Echvi_4683 at 5606.218 kb on + strand, within Echvi_4683 at 5606.218 kb on + strand, within Echvi_4683 at 5606.219 kb on - strand, within Echvi_4683 at 5606.485 kb on + strand at 5606.485 kb on + strand at 5606.515 kb on + strand at 5606.516 kb on - strand at 5606.516 kb on - strand at 5606.523 kb on - strand at 5606.528 kb on - strand at 5606.528 kb on - strand at 5606.645 kb on + strand at 5606.645 kb on + strand at 5606.769 kb on + strand, within Echvi_4684 at 5606.769 kb on + strand, within Echvi_4684 at 5606.818 kb on - strand, within Echvi_4684 at 5606.818 kb on - strand, within Echvi_4684 at 5606.861 kb on + strand, within Echvi_4684 at 5606.862 kb on - strand, within Echvi_4684 at 5606.862 kb on - strand, within Echvi_4684 at 5606.881 kb on + strand, within Echvi_4684 at 5606.882 kb on - strand, within Echvi_4684 at 5606.898 kb on - strand, within Echvi_4684 at 5606.902 kb on + strand, within Echvi_4684 at 5606.902 kb on + strand, within Echvi_4684 at 5606.902 kb on + strand, within Echvi_4684 at 5606.903 kb on - strand, within Echvi_4684 at 5606.903 kb on - strand, within Echvi_4684 at 5606.908 kb on + strand, within Echvi_4684 at 5606.942 kb on - strand, within Echvi_4684 at 5606.949 kb on - strand, within Echvi_4684 at 5606.953 kb on + strand, within Echvi_4684 at 5606.960 kb on - strand, within Echvi_4684 at 5606.961 kb on + strand, within Echvi_4684 at 5606.961 kb on + strand, within Echvi_4684 at 5606.962 kb on - strand, within Echvi_4684 at 5606.962 kb on - strand, within Echvi_4684 at 5607.049 kb on - strand, within Echvi_4684 at 5607.165 kb on + strand, within Echvi_4684 at 5607.185 kb on + strand, within Echvi_4684 at 5607.200 kb on + strand, within Echvi_4684 at 5607.224 kb on - strand, within Echvi_4684 at 5607.241 kb on + strand, within Echvi_4684 at 5607.279 kb on - strand, within Echvi_4684 at 5607.564 kb on - strand, within Echvi_4684 at 5607.587 kb on + strand, within Echvi_4684 at 5607.726 kb on + strand, within Echvi_4684 at 5607.739 kb on - strand, within Echvi_4684 at 5607.739 kb on - strand, within Echvi_4684 at 5607.903 kb on - strand at 5607.958 kb on - strand at 5607.991 kb on - strand at 5608.010 kb on - strand at 5608.025 kb on - strand at 5608.028 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. D-Cycloserine 0.064 mg/ml remove 5,605,658 + Echvi_4683 0.52 +0.4 5,605,724 + Echvi_4683 0.55 -0.9 5,605,954 + Echvi_4683 0.66 +1.1 5,605,954 + Echvi_4683 0.66 -1.3 5,605,977 - Echvi_4683 0.67 -0.2 5,606,018 + Echvi_4683 0.69 -1.4 5,606,018 + Echvi_4683 0.69 -0.4 5,606,019 - Echvi_4683 0.70 -3.2 5,606,019 - Echvi_4683 0.70 +1.7 5,606,117 - Echvi_4683 0.74 -0.6 5,606,120 + Echvi_4683 0.74 -2.7 5,606,120 + Echvi_4683 0.74 +1.7 5,606,120 + Echvi_4683 0.74 -1.7 5,606,121 - Echvi_4683 0.74 -0.6 5,606,122 + Echvi_4683 0.75 +1.1 5,606,122 + Echvi_4683 0.75 -0.4 5,606,122 + Echvi_4683 0.75 +0.8 5,606,122 + Echvi_4683 0.75 +0.5 5,606,122 + Echvi_4683 0.75 -1.3 5,606,123 - Echvi_4683 0.75 -1.1 5,606,123 - Echvi_4683 0.75 -0.9 5,606,123 - Echvi_4683 0.75 -0.9 5,606,123 - Echvi_4683 0.75 -3.0 5,606,123 - Echvi_4683 0.75 -1.5 5,606,126 + Echvi_4683 0.75 +0.8 5,606,216 + Echvi_4683 0.79 -1.4 5,606,216 + Echvi_4683 0.79 +0.5 5,606,218 + Echvi_4683 0.79 -0.5 5,606,218 + Echvi_4683 0.79 -2.3 5,606,218 + Echvi_4683 0.79 -0.6 5,606,219 - Echvi_4683 0.79 -0.5 5,606,485 + +0.2 5,606,485 + +2.2 5,606,515 + -1.9 5,606,516 - -0.2 5,606,516 - -1.3 5,606,523 - -0.4 5,606,528 - +3.1 5,606,528 - +0.8 5,606,645 + +0.2 5,606,645 + +0.7 5,606,769 + Echvi_4684 0.10 +0.6 5,606,769 + Echvi_4684 0.10 +0.7 5,606,818 - Echvi_4684 0.14 -1.4 5,606,818 - Echvi_4684 0.14 -0.2 5,606,861 + Echvi_4684 0.18 -1.6 5,606,862 - Echvi_4684 0.18 -0.4 5,606,862 - Echvi_4684 0.18 -1.9 5,606,881 + Echvi_4684 0.19 +2.1 5,606,882 - Echvi_4684 0.20 +1.4 5,606,898 - Echvi_4684 0.21 +0.3 5,606,902 + Echvi_4684 0.21 +0.6 5,606,902 + Echvi_4684 0.21 +0.5 5,606,902 + Echvi_4684 0.21 -0.6 5,606,903 - Echvi_4684 0.21 -1.9 5,606,903 - Echvi_4684 0.21 +1.0 5,606,908 + Echvi_4684 0.22 +2.7 5,606,942 - Echvi_4684 0.24 -0.9 5,606,949 - Echvi_4684 0.25 +4.0 5,606,953 + Echvi_4684 0.25 -0.6 5,606,960 - Echvi_4684 0.26 -2.1 5,606,961 + Echvi_4684 0.26 -2.3 5,606,961 + Echvi_4684 0.26 +1.7 5,606,962 - Echvi_4684 0.26 +1.1 5,606,962 - Echvi_4684 0.26 +0.6 5,607,049 - Echvi_4684 0.33 +1.3 5,607,165 + Echvi_4684 0.43 +2.2 5,607,185 + Echvi_4684 0.44 +0.5 5,607,200 + Echvi_4684 0.45 +0.6 5,607,224 - Echvi_4684 0.47 -1.4 5,607,241 + Echvi_4684 0.49 +0.4 5,607,279 - Echvi_4684 0.52 -1.2 5,607,564 - Echvi_4684 0.75 -1.5 5,607,587 + Echvi_4684 0.77 +2.2 5,607,726 + Echvi_4684 0.88 -2.8 5,607,739 - Echvi_4684 0.89 +2.0 5,607,739 - Echvi_4684 0.89 -1.9 5,607,903 - -0.6 5,607,958 - +0.5 5,607,991 - -2.6 5,608,010 - +1.3 5,608,025 - +0.7 5,608,028 - -0.8
Or see this region's nucleotide sequence