Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4652

Experiment: m.b. D-Cycloserine 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.064 mg/ml
5,567,906	+		Echvi_4650	0.34	+1.4
5,567,907	-		Echvi_4650	0.34	-3.3
5,567,949	-		Echvi_4650	0.41	-1.1
5,567,976	-		Echvi_4650	0.45	+1.4
5,567,990	-		Echvi_4650	0.48	-1.7
5,567,992	-		Echvi_4650	0.48	-2.1
5,568,015	-		Echvi_4650	0.52	+1.3
5,568,060	+		Echvi_4650	0.59	-2.4
5,568,142	+		Echvi_4650	0.73	+0.7
5,568,154	+		Echvi_4650	0.75	+0.1
5,568,154	+		Echvi_4650	0.75	-1.7
5,568,154	+		Echvi_4650	0.75	+1.8
5,568,157	+		Echvi_4650	0.75	-0.7
5,568,224	+		Echvi_4650	0.86	+1.9
5,568,282	+				+0.9
5,568,282	+				+0.6
5,568,283	-				+0.8
5,568,324	+				-1.7
5,568,324	+				+1.2
5,568,373	-		Echvi_4651	0.18	-0.4
5,568,373	-		Echvi_4651	0.18	+2.7
5,568,373	-		Echvi_4651	0.18	-1.2
5,568,373	-		Echvi_4651	0.18	-1.5
5,568,373	-		Echvi_4651	0.18	-0.2
5,568,375	-		Echvi_4651	0.18	-1.2
5,568,406	-		Echvi_4651	0.25	-0.7
5,568,496	+		Echvi_4651	0.45	-2.1
5,568,523	+		Echvi_4651	0.51	-0.6
5,568,524	-		Echvi_4651	0.51	+0.5
5,568,524	-		Echvi_4651	0.51	-2.7
5,568,555	+		Echvi_4651	0.58	-1.2
5,568,555	+		Echvi_4651	0.58	-0.9
5,568,605	+		Echvi_4651	0.69	+1.0
5,568,634	+		Echvi_4651	0.76	-2.3
5,568,634	+		Echvi_4651	0.76	-2.0
5,568,635	-		Echvi_4651	0.76	+0.5
5,568,653	+		Echvi_4651	0.80	+0.8
5,568,684	+		Echvi_4651	0.87	+0.9
5,568,697	-		Echvi_4651	0.90	+1.0
5,568,703	-				-0.4
5,568,703	-				+0.4
5,568,703	-				+0.2
5,568,703	-				-1.4
5,568,703	-				+0.1
5,568,746	+				-2.1
5,568,746	+				-1.1
5,568,747	-				-0.1
5,568,749	+				-0.6
5,568,750	-				-0.2
5,568,756	+				-1.2
5,568,756	+				-1.9
5,568,757	-				+3.4
5,568,765	+				-0.4
5,568,829	+				-1.8
5,568,933	+				-1.5
5,568,933	+				+0.2
5,568,934	-				-0.6
5,568,957	-				-0.5
5,568,965	+				-0.8
5,568,965	+				+0.4
5,568,965	+				+1.2
5,568,965	+				+0.4
5,568,965	+				-0.4
5,568,965	+				+1.2
5,568,965	+				+2.3
5,568,965	+				-0.0
5,568,965	+				+0.5
5,568,966	-				-1.2
5,568,966	-				+2.4
5,568,966	-				+2.1
5,568,966	-				-0.3
5,568,966	-				+0.2
5,568,992	+				-1.0
5,568,993	-				+0.4
5,569,011	+		Echvi_4652	0.12	-2.2
5,569,148	-		Echvi_4652	0.25	+0.3
5,569,173	+		Echvi_4652	0.27	+0.6
5,569,318	-		Echvi_4652	0.41	+0.5
5,569,345	+		Echvi_4652	0.43	-0.1
5,569,354	+		Echvi_4652	0.44	-1.3
5,569,354	+		Echvi_4652	0.44	+0.5
5,569,354	+		Echvi_4652	0.44	-0.6
5,569,355	-		Echvi_4652	0.44	+0.8
5,569,355	-		Echvi_4652	0.44	+1.6
5,569,424	+		Echvi_4652	0.51	+1.2
5,569,527	+		Echvi_4652	0.61	+1.1
5,569,528	-		Echvi_4652	0.61	-0.8
5,569,528	-		Echvi_4652	0.61	+0.3
5,569,548	-		Echvi_4652	0.63	-1.2
5,569,608	+		Echvi_4652	0.68	+3.5
5,569,609	-		Echvi_4652	0.68	+0.2
5,569,679	+		Echvi_4652	0.75	-1.3
5,569,679	+		Echvi_4652	0.75	+1.9
5,569,679	+		Echvi_4652	0.75	-0.9
5,569,680	-		Echvi_4652	0.75	-0.3
5,569,809	+		Echvi_4652	0.87	+2.5
5,569,809	+		Echvi_4652	0.87	-0.4
5,569,810	-		Echvi_4652	0.88	-0.9
5,569,810	-		Echvi_4652	0.88	+0.4
5,569,810	-		Echvi_4652	0.88	+0.4
5,569,811	+		Echvi_4652	0.88	-3.4
5,569,812	-		Echvi_4652	0.88	+1.7
5,569,812	-		Echvi_4652	0.88	-0.7
5,569,812	-		Echvi_4652	0.88	+1.8
5,569,812	-		Echvi_4652	0.88	-1.9
5,569,833	+		Echvi_4652	0.90	-0.5
5,569,833	+		Echvi_4652	0.90	-0.4
5,569,834	-		Echvi_4652	0.90	+1.4
5,569,928	+				+0.2
5,569,929	-				-1.0
5,569,934	+				-1.6
5,569,935	-				+0.7
5,569,940	+				-0.1
5,569,940	+				-0.8
5,569,941	-				+0.2
5,569,947	-				-0.2
5,569,954	-				-1.9
5,570,190	+				+0.8
5,570,331	+		Echvi_4653	0.15	+0.4
5,570,717	+		Echvi_4653	0.36	+0.1