Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4493

Experiment: m.b. D-Cycloserine 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.064 mg/ml
5,370,184	-		Echvi_4492	0.55	+2.4
5,370,184	-		Echvi_4492	0.55	+0.0
5,370,187	+		Echvi_4492	0.55	-1.2
5,370,188	-		Echvi_4492	0.55	+0.7
5,370,190	-		Echvi_4492	0.55	+0.1
5,370,190	-		Echvi_4492	0.55	-1.1
5,370,190	-		Echvi_4492	0.55	-1.2
5,370,200	+		Echvi_4492	0.56	+1.3
5,370,202	-		Echvi_4492	0.56	-1.1
5,370,202	-		Echvi_4492	0.56	-1.9
5,370,206	-		Echvi_4492	0.56	-1.9
5,370,404	-		Echvi_4492	0.70	+0.0
5,370,404	-		Echvi_4492	0.70	+0.0
5,370,404	-		Echvi_4492	0.70	+0.0
5,370,404	-		Echvi_4492	0.70	+2.7
5,370,405	+		Echvi_4492	0.71	-1.4
5,370,406	-		Echvi_4492	0.71	+2.2
5,370,406	-		Echvi_4492	0.71	-3.0
5,370,432	+		Echvi_4492	0.73	+1.5
5,370,433	-		Echvi_4492	0.73	+1.0
5,370,434	+		Echvi_4492	0.73	-1.8
5,370,434	+		Echvi_4492	0.73	+2.0
5,370,436	+		Echvi_4492	0.73	+0.9
5,370,436	+		Echvi_4492	0.73	+0.3
5,370,456	+		Echvi_4492	0.74	-2.7
5,370,456	+		Echvi_4492	0.74	+0.3
5,370,458	+		Echvi_4492	0.74	-1.6
5,370,458	+		Echvi_4492	0.74	-1.1
5,370,458	+		Echvi_4492	0.74	+0.4
5,370,459	-		Echvi_4492	0.74	-0.4
5,370,459	-		Echvi_4492	0.74	+1.0
5,370,459	-		Echvi_4492	0.74	+0.4
5,370,480	+		Echvi_4492	0.76	-2.8
5,370,499	-		Echvi_4492	0.77	-0.3
5,370,523	+		Echvi_4492	0.79	-2.9
5,370,523	+		Echvi_4492	0.79	-2.0
5,370,524	-		Echvi_4492	0.79	+1.3
5,370,527	+		Echvi_4492	0.79	-0.0
5,370,528	-		Echvi_4492	0.79	-0.5
5,370,568	+		Echvi_4492	0.82	-2.2
5,370,591	+		Echvi_4492	0.84	+0.7
5,370,595	+		Echvi_4492	0.84	-1.0
5,370,595	+		Echvi_4492	0.84	-3.1
5,370,595	+		Echvi_4492	0.84	-1.7
5,370,596	-		Echvi_4492	0.84	-1.0
5,370,707	-				-1.4
5,370,711	+				+2.6
5,370,809	+				-2.6
5,370,810	-				-0.5
5,370,816	+				-1.4
5,370,821	-				+0.2
5,370,831	+				-0.9
5,370,864	-				+1.6
5,370,864	-				+0.8
5,370,979	+				+1.6
5,370,984	+				+1.9
5,371,022	-				+1.3
5,371,029	-				-1.7
5,371,029	-				+2.5
5,371,029	-				+0.9
5,371,029	-				-1.7
5,371,037	-				-1.7
5,371,075	-				-2.5
5,371,075	-				+0.3
5,371,121	-				+1.3
5,371,216	+		Echvi_4493	0.12	-1.5
5,371,216	+		Echvi_4493	0.12	-1.1
5,371,216	+		Echvi_4493	0.12	-1.2
5,371,217	-		Echvi_4493	0.12	-1.5
5,371,226	+		Echvi_4493	0.14	-1.4
5,371,226	+		Echvi_4493	0.14	-1.4
5,371,226	+		Echvi_4493	0.14	+0.3
5,371,226	+		Echvi_4493	0.14	-0.7
5,371,227	-		Echvi_4493	0.14	+2.4
5,371,227	-		Echvi_4493	0.14	-0.1
5,371,227	-		Echvi_4493	0.14	-1.4
5,371,227	-		Echvi_4493	0.14	+0.1
5,371,254	-		Echvi_4493	0.17	+1.6
5,371,254	-		Echvi_4493	0.17	-3.3
5,371,287	-		Echvi_4493	0.21	+0.8
5,371,287	-		Echvi_4493	0.21	+0.6
5,371,288	+		Echvi_4493	0.21	-1.4
5,371,288	+		Echvi_4493	0.21	-0.6
5,371,289	-		Echvi_4493	0.21	+0.1
5,371,295	+		Echvi_4493	0.22	-0.7
5,371,296	-		Echvi_4493	0.22	-0.2
5,371,298	+		Echvi_4493	0.22	+2.0
5,371,299	-		Echvi_4493	0.22	-0.7
5,371,339	+		Echvi_4493	0.27	-1.7
5,371,339	+		Echvi_4493	0.27	-3.2
5,371,392	-		Echvi_4493	0.33	+2.6
5,371,414	-		Echvi_4493	0.36	-0.2
5,371,528	+		Echvi_4493	0.49	-0.2
5,371,528	+		Echvi_4493	0.49	+0.1
5,371,528	+		Echvi_4493	0.49	-1.6
5,371,529	-		Echvi_4493	0.49	-0.3
5,371,579	+		Echvi_4493	0.55	+0.7
5,371,580	-		Echvi_4493	0.55	+1.7
5,371,580	-		Echvi_4493	0.55	+1.2
5,371,581	+		Echvi_4493	0.55	+1.1
5,371,582	-		Echvi_4493	0.55	+1.6
5,371,648	+		Echvi_4493	0.63	-1.6
5,371,708	+		Echvi_4493	0.70	-0.7
5,371,710	+		Echvi_4493	0.71	+0.1
5,371,711	-		Echvi_4493	0.71	+0.6
5,371,735	+		Echvi_4493	0.73	-2.1
5,371,735	+		Echvi_4493	0.73	-2.0
5,371,735	+		Echvi_4493	0.73	-0.7
5,371,736	-		Echvi_4493	0.74	-2.7
5,371,736	-		Echvi_4493	0.74	-2.1
5,371,736	-		Echvi_4493	0.74	+0.8
5,371,804	-		Echvi_4493	0.82	-3.2
5,371,823	+		Echvi_4493	0.84	-0.3
5,371,824	-		Echvi_4493	0.84	-2.5
5,371,835	-		Echvi_4493	0.85	+2.2
5,371,915	-				-1.7
5,372,028	-				-0.8
5,372,062	+				-1.2
5,372,062	+				+2.9
5,372,067	-				+0.0
5,372,098	-				+0.3
5,372,133	+				-4.0
5,372,143	-				-1.0
5,372,143	-				+2.5
5,372,143	-				+0.1
5,372,143	-				+0.4
5,372,145	-				-2.6
5,372,172	-				+1.3
5,372,240	+				-3.1
5,372,241	-				-2.7
5,372,405	-				+0.1
5,372,411	+				-1.3
5,372,412	-				-1.7
5,372,412	-				+3.9
5,372,412	-				+0.0
5,372,412	-				-2.0
5,372,450	-				-0.2
5,372,466	+				-1.6
5,372,466	+				-2.3
5,372,467	-				+2.3
5,372,520	-				-1.1
5,372,523	-				-2.9
5,372,575	+				+0.8
5,372,576	-				-1.7
5,372,584	+				-1.5
5,372,584	+				+0.3
5,372,588	+				+0.5
5,372,588	+				-0.6
5,372,590	+				-2.2
5,372,590	+				+0.9
5,372,594	+				+1.0
5,372,595	-				+0.2
5,372,595	-				-1.4
5,372,595	-				-0.3
5,372,596	+				-2.0
5,372,596	+				-1.7
5,372,596	+				-1.9
5,372,597	-				-1.7
5,372,597	-				-2.0
5,372,625	+				-0.2
5,372,632	+				+0.3
5,372,633	-				+1.7
5,372,633	-				+1.2
5,372,641	+				-2.7
5,372,641	+				+1.7
5,372,641	+				+0.4
5,372,651	+				-0.0
5,372,651	+				+1.0
5,372,651	+				+2.2
5,372,653	+				+0.8
5,372,653	+				+1.3
5,372,654	-				+0.8
5,372,654	-				-0.5
5,372,654	-				-0.3
5,372,654	-				+0.2
5,372,654	-				-2.1
5,372,660	+				+1.1
5,372,660	+				+1.0
5,372,660	+				+2.0
5,372,660	+				+1.6
5,372,665	-				+0.7
5,372,665	-				-1.7
5,372,681	+				-1.4
5,372,681	+				+1.3
5,372,753	+				-0.2
5,372,754	-				+0.3
5,372,784	+				+0.2
5,372,852	-		Echvi_4494	0.12	-0.7
5,372,852	-		Echvi_4494	0.12	-1.6
5,372,889	+		Echvi_4494	0.15	+1.2
5,372,890	-		Echvi_4494	0.15	+1.4
5,372,890	-		Echvi_4494	0.15	-1.2
5,372,890	-				+1.3
5,372,895	-		Echvi_4494	0.15	+2.4
5,372,895	-		Echvi_4494	0.15	+0.2
5,372,900	+		Echvi_4494	0.16	+1.2
5,372,900	+		Echvi_4494	0.16	-2.5
5,372,900	+		Echvi_4494	0.16	+0.8
5,372,900	+		Echvi_4494	0.16	+1.9
5,372,900	+		Echvi_4494	0.16	-1.9
5,372,900	+		Echvi_4494	0.16	+1.8
5,372,900	+		Echvi_4494	0.16	-1.0
5,372,900	+		Echvi_4494	0.16	+1.3
5,372,900	+		Echvi_4494	0.16	+2.2
5,372,901	-		Echvi_4494	0.16	+2.1
5,372,901	-		Echvi_4494	0.16	+1.5
5,372,901	-		Echvi_4494	0.16	-3.2
5,372,901	-		Echvi_4494	0.16	+0.1
5,372,901	-		Echvi_4494	0.16	-1.7
5,372,901	-		Echvi_4494	0.16	-2.8
5,372,912	+		Echvi_4494	0.17	-2.5
5,372,922	+		Echvi_4494	0.18	-1.8
5,372,922	+		Echvi_4494	0.18	+0.2
5,372,922	+		Echvi_4494	0.18	-1.7
5,372,923	-		Echvi_4494	0.18	-0.1
5,372,923	-		Echvi_4494	0.18	-1.5
5,372,952	-		Echvi_4494	0.20	+0.0