Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4490

Experiment: m.b. D-Cycloserine 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.064 mg/ml
5,365,829	+				+0.7
5,365,829	+				+0.8
5,365,830	-				+0.1
5,365,930	+		Echvi_4487	0.69	-0.4
5,365,930	+		Echvi_4487	0.69	-1.0
5,365,930	+		Echvi_4487	0.69	-2.3
5,365,931	-		Echvi_4487	0.69	-0.3
5,365,931	-		Echvi_4487	0.69	+1.1
5,365,961	+				-1.9
5,365,961	+				-1.7
5,365,961	+				-0.8
5,365,962	-				-2.9
5,365,962	-				-1.4
5,365,962	-				-3.5
5,365,971	-				-3.8
5,365,972	+				+0.1
5,365,972	+				+0.3
5,365,973	-				+2.0
5,365,973	-				+0.1
5,365,989	-				-1.9
5,366,006	+				-1.5
5,366,007	-				-3.2
5,366,030	+				+0.6
5,366,030	+				+1.7
5,366,031	-				-0.2
5,366,139	+		Echvi_4488	0.38	+0.8
5,366,139	+		Echvi_4488	0.38	-2.0
5,366,192	-		Echvi_4488	0.56	+0.1
5,366,201	+		Echvi_4488	0.59	+1.5
5,366,202	-		Echvi_4488	0.59	-0.7
5,366,313	+				-1.6
5,366,313	+				-0.6
5,366,345	+				+0.5
5,366,345	+				-0.5
5,366,354	+		Echvi_4489	0.11	+3.0
5,366,646	-				-1.5
5,366,647	+				-1.1
5,366,958	+				+0.8
5,367,116	-		Echvi_4490	0.19	-0.1
5,367,116	-		Echvi_4490	0.19	+1.4
5,367,116	-		Echvi_4490	0.19	+0.3
5,367,262	-		Echvi_4490	0.28	-0.8
5,367,262	-		Echvi_4490	0.28	+0.2
5,367,263	+		Echvi_4490	0.28	-2.4
5,367,276	+		Echvi_4490	0.29	+0.0
5,367,276	+		Echvi_4490	0.29	-1.5
5,367,276	+		Echvi_4490	0.29	-2.6
5,367,276	+		Echvi_4490	0.29	+0.3
5,367,277	-		Echvi_4490	0.29	-1.7
5,367,278	+		Echvi_4490	0.29	+0.3
5,367,292	-		Echvi_4490	0.30	-1.6
5,367,300	+		Echvi_4490	0.30	-0.6
5,367,414	-		Echvi_4490	0.38	-1.4
5,367,424	-		Echvi_4490	0.38	+0.6
5,367,434	+		Echvi_4490	0.39	+0.0
5,367,435	-		Echvi_4490	0.39	-3.1
5,367,533	-		Echvi_4490	0.45	+0.0
5,367,543	+		Echvi_4490	0.46	-0.2
5,367,580	-		Echvi_4490	0.48	+1.0
5,367,648	+		Echvi_4490	0.53	-1.7
5,367,649	-		Echvi_4490	0.53	+0.3
5,367,651	+		Echvi_4490	0.53	-1.4
5,367,659	-		Echvi_4490	0.54	-0.3
5,367,660	+		Echvi_4490	0.54	-0.8
5,367,660	+		Echvi_4490	0.54	-2.3
5,367,660	+		Echvi_4490	0.54	+0.2
5,367,661	-		Echvi_4490	0.54	-1.7
5,367,666	-		Echvi_4490	0.54	+0.0
5,367,686	-		Echvi_4490	0.55	+0.4
5,367,789	+		Echvi_4490	0.62	+2.0
5,367,800	+		Echvi_4490	0.63	+0.9
5,367,912	+		Echvi_4490	0.70	+4.0
5,368,085	+		Echvi_4490	0.81	-0.8
5,368,085	+		Echvi_4490	0.81	-1.0
5,368,086	-		Echvi_4490	0.81	-1.8
5,368,086	-		Echvi_4490	0.81	-1.7
5,368,086	-		Echvi_4490	0.81	-1.7
5,368,108	-		Echvi_4490	0.82	-0.2
5,368,108	-		Echvi_4490	0.82	+0.0
5,368,188	+		Echvi_4490	0.88	+0.3
5,368,189	-		Echvi_4490	0.88	+1.4
5,368,236	+				-1.6
5,368,237	-				-4.3
5,368,261	+				-3.2
5,368,262	-				-2.9
5,368,262	-				-0.7
5,368,307	+				-1.5
5,368,308	-				+1.3
5,368,325	+				-1.7
5,368,344	+				-2.0
5,368,381	-				-2.0
5,368,488	+				+3.6
5,368,489	-				-0.7
5,368,648	+				-0.7
5,368,648	+				+0.3
5,368,648	+				+1.8
5,368,746	-				+1.3
5,368,750	-				+0.1
5,368,754	+				+0.2
5,368,754	+				-1.8
5,368,759	+				+0.4
5,368,792	-				-2.8
5,368,805	-				-0.7
5,368,805	-				+2.0
5,368,805	-				+1.3
5,368,816	+				-1.9
5,368,816	+				-0.3
5,368,817	-				-2.7
5,368,817	-				-1.7
5,368,817	-				-2.6
5,368,820	+				+2.0
5,368,820	+				-2.1
5,368,848	+				-2.6
5,368,855	+				+0.3
5,368,987	+		Echvi_4491	0.50	+1.1
5,368,987	+		Echvi_4491	0.50	-1.0
5,368,988	-		Echvi_4491	0.51	+0.3
5,368,991	-		Echvi_4491	0.52	+3.1
5,369,008	-		Echvi_4491	0.57	+0.3
5,369,036	-		Echvi_4491	0.66	+1.1
5,369,036	-		Echvi_4491	0.66	-0.4
5,369,043	+		Echvi_4491	0.68	-0.2
5,369,097	+		Echvi_4491	0.85	-2.2
5,369,097	+		Echvi_4491	0.85	+0.5
5,369,098	-		Echvi_4491	0.86	-2.7
5,369,098	-		Echvi_4491	0.86	+0.1
5,369,150	-				+0.4
5,369,182	+				-0.6
5,369,185	-				+1.9
5,369,252	-				-1.0
5,369,252	-				+0.8
5,369,253	+				-3.4
5,369,253	+				-2.0
5,369,261	-				+0.2
5,369,304	+				-1.6
5,369,309	-				+0.7
5,369,309	-				-1.5
5,369,309	-				-0.8