Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4483

Experiment: m.b. D-Cycloserine 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.064 mg/ml
5,361,144	+		Echvi_4481	0.70	+3.8
5,361,144	+		Echvi_4481	0.70	-2.0
5,361,145	-		Echvi_4481	0.70	+0.2
5,361,214	-		Echvi_4481	0.74	+2.5
5,361,220	+		Echvi_4481	0.74	-1.5
5,361,221	-		Echvi_4481	0.74	+0.3
5,361,264	+		Echvi_4481	0.76	-0.5
5,361,265	-		Echvi_4481	0.76	-0.8
5,361,265	-		Echvi_4481	0.76	-0.7
5,361,284	+		Echvi_4481	0.77	+2.0
5,361,285	-		Echvi_4481	0.77	-0.2
5,361,308	-		Echvi_4481	0.79	-0.4
5,361,398	+		Echvi_4481	0.83	-1.4
5,361,398	+		Echvi_4481	0.83	-0.3
5,361,405	+		Echvi_4481	0.84	-1.6
5,361,405	+		Echvi_4481	0.84	-1.2
5,361,455	+		Echvi_4481	0.86	+0.6
5,361,485	+		Echvi_4481	0.88	-1.0
5,361,485	+		Echvi_4481	0.88	-2.0
5,361,489	+		Echvi_4481	0.88	+0.3
5,361,489	+		Echvi_4481	0.88	+0.5
5,361,489	+		Echvi_4481	0.88	-1.3
5,361,490	-		Echvi_4481	0.88	-1.0
5,361,490	-		Echvi_4481	0.88	-0.6
5,361,490	-		Echvi_4481	0.88	+1.1
5,361,490	-		Echvi_4481	0.88	-3.4
5,361,490	-		Echvi_4481	0.88	-0.7
5,361,490	-		Echvi_4481	0.88	-0.2
5,361,531	+				-1.0
5,361,532	-				+0.4
5,361,555	+				+1.1
5,361,686	+				+1.0
5,361,686	+				+1.3
5,361,687	-				+0.8
5,361,687	-				+2.9
5,361,698	+				+1.1
5,361,704	+				+1.2
5,361,704	+				-2.7
5,361,705	-				-1.9
5,361,705	-				-1.5
5,361,705	-				-0.1
5,361,705	-				+3.9
5,361,705	-				-2.4
5,361,728	+				-1.2
5,361,728	+				+1.1
5,361,729	-				-1.9
5,361,731	+				-0.8
5,361,731	+				+0.7
5,361,761	+				-0.2
5,361,762	-				+0.2
5,361,763	+				+2.7
5,361,763	+				+1.7
5,361,763	+				-2.0
5,361,764	-				-1.0
5,361,777	-		Echvi_4482	0.10	-2.1
5,361,796	-		Echvi_4482	0.16	-0.8
5,361,836	+		Echvi_4482	0.28	-0.9
5,361,905	-		Echvi_4482	0.48	-1.6
5,361,905	-		Echvi_4482	0.48	-1.8
5,361,924	+		Echvi_4482	0.54	+1.3
5,361,924	+		Echvi_4482	0.54	-0.6
5,361,982	-		Echvi_4482	0.71	+0.5
5,361,982	-		Echvi_4482	0.71	-1.1
5,361,982	-		Echvi_4482	0.71	-1.2
5,362,015	-		Echvi_4482	0.81	-1.4
5,362,021	+		Echvi_4482	0.82	-0.8
5,362,021	+		Echvi_4482	0.82	+3.7
5,362,021	+		Echvi_4482	0.82	-3.1
5,362,022	-		Echvi_4482	0.83	-1.5
5,362,022	-		Echvi_4482	0.83	-1.6
5,362,087	-				-1.2
5,362,132	+				+0.7
5,362,134	+				+0.9
5,362,134	+				+2.0
5,362,141	+				-2.4
5,362,141	+				-0.8
5,362,141	+				+1.9
5,362,179	-		Echvi_4483	0.14	-0.2
5,362,210	+		Echvi_4483	0.19	-0.7
5,362,211	-		Echvi_4483	0.19	-1.7
5,362,253	-		Echvi_4483	0.26	-0.9
5,362,272	-		Echvi_4483	0.29	-1.4
5,362,331	-		Echvi_4483	0.38	-0.8
5,362,352	-		Echvi_4483	0.41	+1.0
5,362,551	-		Echvi_4483	0.71	-2.6
5,362,571	+		Echvi_4483	0.74	-1.0
5,362,571	+		Echvi_4483	0.74	+0.4
5,362,572	-		Echvi_4483	0.74	-0.2
5,362,575	+		Echvi_4483	0.75	-0.5
5,362,655	-		Echvi_4483	0.87	+0.2
5,362,673	-				+2.2
5,362,682	+				+0.6
5,362,683	-				+1.4
5,362,715	-				-2.7
5,362,759	-				+1.3
5,362,761	+				+1.6
5,362,762	-				+2.2
5,362,762	-				+1.7
5,362,764	+				+1.0
5,362,764	+				-0.9
5,362,767	+				-0.5
5,362,783	+		Echvi_4484	0.13	+2.1
5,362,783	+		Echvi_4484	0.13	-0.7
5,362,784	-		Echvi_4484	0.13	-2.9
5,362,793	-		Echvi_4484	0.15	-0.3
5,362,803	+		Echvi_4484	0.18	+1.5
5,362,819	-		Echvi_4484	0.22	+0.3
5,362,823	+		Echvi_4484	0.23	+0.0
5,362,823	+		Echvi_4484	0.23	+0.4
5,362,883	-		Echvi_4484	0.39	-1.6
5,362,909	+		Echvi_4484	0.46	+1.7
5,362,909	+		Echvi_4484	0.46	-1.3
5,362,909	+		Echvi_4484	0.46	+1.0
5,362,910	-		Echvi_4484	0.46	-1.4
5,362,910	-		Echvi_4484	0.46	+0.2
5,362,911	+		Echvi_4484	0.47	-1.0
5,362,911	+		Echvi_4484	0.47	+0.9
5,362,912	-		Echvi_4484	0.47	+1.1
5,362,921	-		Echvi_4484	0.49	+1.9
5,362,956	+		Echvi_4484	0.58	+0.5
5,363,098	-				+1.7
5,363,103	+				-2.9
5,363,103	+				+1.3
5,363,212	+				-0.6
5,363,212	+				-1.4
5,363,212	+				+4.8
5,363,212	+				-2.1
5,363,212	+				+1.1
5,363,213	-				-0.2
5,363,213	-				+1.2
5,363,213	-				-1.7
5,363,233	+				-1.5
5,363,299	+				+2.6
5,363,394	+		Echvi_4485	0.12	-1.7
5,363,470	+		Echvi_4485	0.38	-1.3
5,363,471	-		Echvi_4485	0.38	-1.6
5,363,516	+		Echvi_4485	0.54	+0.0
5,363,537	-		Echvi_4485	0.61	+2.2
5,363,537	-		Echvi_4485	0.61	+4.6
5,363,573	+		Echvi_4485	0.73	+1.3
5,363,573	+		Echvi_4485	0.73	-0.7
5,363,574	-		Echvi_4485	0.73	-0.2
5,363,656	-				+2.5
5,363,656	-				-1.7