Experiment: m.b. D-Cycloserine 0.064 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_4426 and Echvi_4427 are separated by 3 nucleotides Echvi_4427 and Echvi_4428 are separated by 517 nucleotides
Echvi_4426: Echvi_4426 - Outer membrane protein, at 5,293,756 to 5,295,111
_4426
Echvi_4427: Echvi_4427 - Transcriptional regulator, at 5,295,115 to 5,295,720
_4427
Echvi_4428: Echvi_4428 - Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain, at 5,296,238 to 5,299,924
_4428
Position (kb)
5295
5296 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 5294.124 kb on + strand, within Echvi_4426 at 5294.124 kb on + strand, within Echvi_4426 at 5294.124 kb on + strand, within Echvi_4426 at 5294.124 kb on + strand, within Echvi_4426 at 5294.125 kb on - strand, within Echvi_4426 at 5294.125 kb on - strand, within Echvi_4426 at 5294.125 kb on - strand, within Echvi_4426 at 5294.145 kb on + strand, within Echvi_4426 at 5294.205 kb on - strand, within Echvi_4426 at 5294.234 kb on + strand, within Echvi_4426 at 5294.267 kb on - strand, within Echvi_4426 at 5294.329 kb on + strand, within Echvi_4426 at 5294.329 kb on + strand, within Echvi_4426 at 5294.484 kb on - strand, within Echvi_4426 at 5294.697 kb on - strand, within Echvi_4426 at 5294.778 kb on - strand, within Echvi_4426 at 5295.016 kb on + strand at 5295.135 kb on + strand at 5295.137 kb on + strand at 5295.168 kb on + strand at 5295.168 kb on + strand at 5295.168 kb on + strand at 5295.168 kb on + strand at 5295.202 kb on + strand, within Echvi_4427 at 5295.211 kb on + strand, within Echvi_4427 at 5295.315 kb on + strand, within Echvi_4427 at 5295.316 kb on - strand, within Echvi_4427 at 5295.316 kb on - strand, within Echvi_4427 at 5295.316 kb on - strand, within Echvi_4427 at 5295.447 kb on - strand, within Echvi_4427 at 5295.468 kb on - strand, within Echvi_4427 at 5295.558 kb on + strand, within Echvi_4427 at 5295.602 kb on + strand, within Echvi_4427 at 5295.656 kb on + strand, within Echvi_4427 at 5295.656 kb on + strand, within Echvi_4427 at 5295.656 kb on + strand, within Echvi_4427 at 5295.656 kb on + strand, within Echvi_4427 at 5295.656 kb on + strand, within Echvi_4427 at 5295.656 kb on + strand, within Echvi_4427 at 5295.656 kb on + strand, within Echvi_4427 at 5295.656 kb on + strand, within Echvi_4427 at 5295.656 kb on + strand, within Echvi_4427 at 5295.656 kb on + strand, within Echvi_4427 at 5295.656 kb on + strand, within Echvi_4427 at 5295.657 kb on - strand, within Echvi_4427 at 5295.657 kb on - strand, within Echvi_4427 at 5295.657 kb on - strand, within Echvi_4427 at 5295.657 kb on - strand, within Echvi_4427 at 5295.657 kb on - strand, within Echvi_4427 at 5295.657 kb on - strand, within Echvi_4427 at 5295.657 kb on - strand, within Echvi_4427 at 5295.657 kb on - strand, within Echvi_4427 at 5295.657 kb on - strand, within Echvi_4427 at 5295.700 kb on + strand at 5295.701 kb on - strand at 5295.962 kb on + strand at 5295.994 kb on + strand at 5296.088 kb on + strand at 5296.093 kb on - strand at 5296.156 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. D-Cycloserine 0.064 mg/ml remove 5,294,124 + Echvi_4426 0.27 -1.3 5,294,124 + Echvi_4426 0.27 +0.9 5,294,124 + Echvi_4426 0.27 -1.1 5,294,124 + Echvi_4426 0.27 +1.7 5,294,125 - Echvi_4426 0.27 -1.0 5,294,125 - Echvi_4426 0.27 -0.4 5,294,125 - Echvi_4426 0.27 +0.9 5,294,145 + Echvi_4426 0.29 +0.5 5,294,205 - Echvi_4426 0.33 -1.6 5,294,234 + Echvi_4426 0.35 +0.9 5,294,267 - Echvi_4426 0.38 +1.7 5,294,329 + Echvi_4426 0.42 +1.0 5,294,329 + Echvi_4426 0.42 +2.4 5,294,484 - Echvi_4426 0.54 +0.8 5,294,697 - Echvi_4426 0.69 +0.0 5,294,778 - Echvi_4426 0.75 -1.3 5,295,016 + -1.0 5,295,135 + -0.6 5,295,137 + +2.1 5,295,168 + -0.6 5,295,168 + +2.4 5,295,168 + -1.0 5,295,168 + -0.9 5,295,202 + Echvi_4427 0.14 +0.0 5,295,211 + Echvi_4427 0.16 +2.0 5,295,315 + Echvi_4427 0.33 +1.1 5,295,316 - Echvi_4427 0.33 -0.5 5,295,316 - Echvi_4427 0.33 +0.9 5,295,316 - Echvi_4427 0.33 +1.6 5,295,447 - Echvi_4427 0.55 +0.2 5,295,468 - Echvi_4427 0.58 -0.5 5,295,558 + Echvi_4427 0.73 +0.4 5,295,602 + Echvi_4427 0.80 +2.0 5,295,656 + Echvi_4427 0.89 -1.1 5,295,656 + Echvi_4427 0.89 -2.8 5,295,656 + Echvi_4427 0.89 +1.0 5,295,656 + Echvi_4427 0.89 +3.4 5,295,656 + Echvi_4427 0.89 +0.5 5,295,656 + Echvi_4427 0.89 -0.1 5,295,656 + Echvi_4427 0.89 -1.1 5,295,656 + Echvi_4427 0.89 +0.6 5,295,656 + Echvi_4427 0.89 +1.4 5,295,656 + Echvi_4427 0.89 -0.8 5,295,656 + Echvi_4427 0.89 -2.6 5,295,657 - Echvi_4427 0.89 +0.2 5,295,657 - Echvi_4427 0.89 -0.7 5,295,657 - Echvi_4427 0.89 -0.6 5,295,657 - Echvi_4427 0.89 +0.0 5,295,657 - Echvi_4427 0.89 -1.0 5,295,657 - Echvi_4427 0.89 -0.3 5,295,657 - Echvi_4427 0.89 -0.6 5,295,657 - Echvi_4427 0.89 +0.7 5,295,657 - Echvi_4427 0.89 +0.4 5,295,700 + +0.4 5,295,701 - -1.0 5,295,962 + -0.1 5,295,994 + +2.3 5,296,088 + +1.5 5,296,093 - +2.5 5,296,156 + -2.3
Or see this region's nucleotide sequence