Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4355

Experiment: m.b. D-Cycloserine 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.064 mg/ml
5,210,977	+		Echvi_4353	0.90	+0.7
5,211,008	+				-2.9
5,211,008	+				+0.0
5,211,009	-				-2.6
5,211,009	-				-1.1
5,211,009	-				+0.2
5,211,009	-				-1.1
5,211,009	-				-1.2
5,211,068	-				-2.8
5,211,097	+				+2.9
5,211,103	+				+3.0
5,211,113	-				-1.3
5,211,125	+				-0.8
5,211,125	+				+0.6
5,211,125	+				-2.0
5,211,126	-				-2.9
5,211,126	-				+1.4
5,211,126	-				-2.9
5,211,131	-				-0.1
5,211,134	-				+0.3
5,211,134	-				-1.5
5,211,153	+				+0.5
5,211,153	+				-2.9
5,211,154	-				+1.8
5,211,156	-				+1.2
5,211,167	+				+1.0
5,211,167	+				-0.1
5,211,167	+				+1.4
5,211,167	+				-1.0
5,211,168	-				+1.7
5,211,169	+				-2.6
5,211,169	+				-2.4
5,211,169	+				-2.2
5,211,170	-				+0.2
5,211,229	-		Echvi_4354	0.20	-1.1
5,211,233	+		Echvi_4354	0.21	-0.2
5,211,241	+		Echvi_4354	0.22	+0.3
5,211,241	+		Echvi_4354	0.22	-1.0
5,211,241	+		Echvi_4354	0.22	+0.8
5,211,244	+		Echvi_4354	0.23	+3.2
5,211,244	+		Echvi_4354	0.23	+0.8
5,211,244	+		Echvi_4354	0.23	+0.8
5,211,245	-		Echvi_4354	0.23	-1.6
5,211,310	-		Echvi_4354	0.35	-1.8
5,211,326	-		Echvi_4354	0.37	-2.7
5,211,330	+		Echvi_4354	0.38	+3.3
5,211,330	+		Echvi_4354	0.38	+1.2
5,211,330	+		Echvi_4354	0.38	+1.5
5,211,331	-		Echvi_4354	0.38	+0.0
5,211,331	-		Echvi_4354	0.38	+0.3
5,211,331	-		Echvi_4354	0.38	+1.8
5,211,345	-		Echvi_4354	0.41	-0.0
5,211,345	-		Echvi_4354	0.41	-0.3
5,211,347	-		Echvi_4354	0.41	-1.4
5,211,347	-		Echvi_4354	0.41	+0.0
5,211,347	-		Echvi_4354	0.41	-1.9
5,211,347	-		Echvi_4354	0.41	+1.6
5,211,372	-		Echvi_4354	0.46	+0.8
5,211,378	+		Echvi_4354	0.47	+1.7
5,211,418	+		Echvi_4354	0.54	-2.2
5,211,419	-		Echvi_4354	0.54	+0.5
5,211,421	+		Echvi_4354	0.54	+0.6
5,211,421	+		Echvi_4354	0.54	-0.2
5,211,422	-		Echvi_4354	0.55	-2.5
5,211,462	+		Echvi_4354	0.62	+0.4
5,211,534	+		Echvi_4354	0.75	-0.2
5,211,534	+		Echvi_4354	0.75	+1.0
5,211,535	-		Echvi_4354	0.75	-1.7
5,211,538	+		Echvi_4354	0.75	+1.8
5,211,571	+		Echvi_4354	0.81	-0.7
5,211,597	-		Echvi_4354	0.86	-0.5
5,211,776	+				+1.3
5,211,777	-				+2.1
5,211,809	-				-0.8
5,211,833	+				+1.4
5,211,889	+				+0.4
5,211,889	+				-2.5
5,211,892	+				+2.4
5,211,893	-				-0.9
5,211,912	+				-1.5
5,211,913	-				-2.8
5,211,913	-				+1.4
5,211,913	-				-3.0
5,211,913	-				-0.5
5,212,107	+		Echvi_4355	0.25	-0.4
5,212,107	+		Echvi_4355	0.25	+0.8
5,212,107	+		Echvi_4355	0.25	+0.4
5,212,107	+		Echvi_4355	0.25	-1.1
5,212,107	+		Echvi_4355	0.25	+1.4
5,212,107	+		Echvi_4355	0.25	-3.2
5,212,107	+		Echvi_4355	0.25	+0.0
5,212,108	-		Echvi_4355	0.25	-2.4
5,212,108	-		Echvi_4355	0.25	-1.2
5,212,149	+		Echvi_4355	0.31	-3.6
5,212,195	+		Echvi_4355	0.36	-0.4
5,212,267	-		Echvi_4355	0.46	-0.5
5,212,267	-		Echvi_4355	0.46	-1.4
5,212,267	-		Echvi_4355	0.46	+1.2
5,212,274	+		Echvi_4355	0.47	+0.3
5,212,426	-		Echvi_4355	0.66	-1.2
5,212,482	+		Echvi_4355	0.73	+1.8
5,212,482	+		Echvi_4355	0.73	+1.0
5,212,483	-		Echvi_4355	0.73	-1.4
5,212,483	-		Echvi_4355	0.73	-0.1
5,212,556	+		Echvi_4355	0.83	+1.5
5,212,648	-				-0.2
5,212,799	+		Echvi_4356	0.12	-0.1
5,212,799	+		Echvi_4356	0.12	+1.7
5,212,799	+		Echvi_4356	0.12	+0.2
5,212,799	+		Echvi_4356	0.12	-2.5
5,213,146	+		Echvi_4356	0.52	-0.5
5,213,147	-		Echvi_4356	0.52	-0.2
5,213,150	+		Echvi_4356	0.52	-2.0
5,213,150	+		Echvi_4356	0.52	+2.4
5,213,150	+		Echvi_4356	0.52	-2.4
5,213,151	-		Echvi_4356	0.52	-1.3
5,213,192	+		Echvi_4356	0.57	+2.4
5,213,420	+		Echvi_4356	0.83	+1.3
5,213,558	+				-2.4
5,213,558	+				-1.2