Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4108

Experiment: m.b. D-Cycloserine 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.064 mg/ml
4,921,097	-		Echvi_4106	0.52	+0.2
4,921,172	-				-0.6
4,921,220	+				-2.5
4,921,224	-				-0.8
4,921,225	+				-1.4
4,921,257	-				-0.8
4,921,293	+				-1.6
4,921,293	+				+0.0
4,921,293	+				+0.1
4,921,294	-				+1.4
4,921,294	-				-1.3
4,921,309	+				-1.6
4,921,348	+				-1.1
4,921,381	+				+0.5
4,921,382	-				+1.3
4,921,382	-				-1.6
4,921,382	-				+1.0
4,921,382	-				-2.0
4,921,446	-				+0.7
4,921,460	+				+0.2
4,921,491	+				+0.7
4,921,551	+				-1.0
4,921,551	+				-0.5
4,921,566	+				-0.7
4,921,567	+				-1.7
4,921,573	-				+1.2
4,921,601	+				-0.8
4,921,606	+				+2.3
4,921,606	+				+0.4
4,921,607	-				-0.0
4,921,609	+				+0.3
4,921,609	+				+0.5
4,921,610	-				+0.3
4,921,652	-				-1.0
4,921,664	-				+1.3
4,921,677	+				-1.8
4,921,680	+				-0.1
4,921,680	+				-3.2
4,921,680	+				-1.9
4,921,680	+				-2.2
4,921,681	-				+0.7
4,921,681	-				+1.1
4,921,682	+				+0.2
4,921,683	-				+0.1
4,921,693	+				+0.6
4,921,701	+				-3.3
4,921,701	+				-0.4
4,921,702	-				-2.1
4,921,708	-				+1.8
4,921,710	+				-1.5
4,921,728	-				+1.2
4,921,757	-				-0.1
4,921,797	-				-0.2
4,921,887	+		Echvi_4107	0.48	+0.2
4,921,935	+		Echvi_4107	0.78	+0.5
4,921,935	+		Echvi_4107	0.78	-0.3
4,921,938	+		Echvi_4107	0.80	-2.1
4,921,938	+		Echvi_4107	0.80	-1.1
4,921,938	+		Echvi_4107	0.80	-0.6
4,921,941	+		Echvi_4107	0.81	-0.3
4,921,942	-		Echvi_4107	0.82	-3.5
4,921,942	-		Echvi_4107	0.82	-2.5
4,921,945	-		Echvi_4107	0.84	+2.2
4,921,973	-				-0.2
4,921,976	+				+0.7
4,921,983	+				-2.1
4,921,984	-				-0.1
4,922,005	-				+0.2
4,922,141	+		Echvi_4108	0.19	+0.4
4,922,142	-		Echvi_4108	0.19	+1.1
4,922,174	+		Echvi_4108	0.23	-2.4
4,922,289	+		Echvi_4108	0.38	+3.5
4,922,289	+		Echvi_4108	0.38	+1.3
4,922,289	+		Echvi_4108	0.38	+0.7
4,922,290	-		Echvi_4108	0.38	+0.2
4,922,293	-		Echvi_4108	0.38	+0.5
4,922,369	+		Echvi_4108	0.48	-1.3
4,922,401	+		Echvi_4108	0.52	-1.7
4,922,401	+		Echvi_4108	0.52	+0.1
4,922,523	+		Echvi_4108	0.67	+0.3
4,922,553	+		Echvi_4108	0.71	-2.4
4,922,554	-		Echvi_4108	0.71	+1.2
4,922,556	-		Echvi_4108	0.72	+3.2
4,922,618	+		Echvi_4108	0.79	-0.5
4,922,619	-		Echvi_4108	0.80	-0.9
4,922,619	-		Echvi_4108	0.80	-3.7
4,922,619	-		Echvi_4108	0.80	+2.8
4,922,622	+		Echvi_4108	0.80	+1.2
4,922,623	-		Echvi_4108	0.80	-0.4
4,922,632	-		Echvi_4108	0.81	-1.5
4,922,650	-		Echvi_4108	0.83	-2.8
4,922,828	-		Echvi_4109	0.14	-0.6
4,922,841	-		Echvi_4109	0.18	-1.9
4,922,846	-		Echvi_4109	0.19	+0.6
4,922,858	+		Echvi_4109	0.22	+0.3
4,922,858	+		Echvi_4109	0.22	+1.2
4,922,859	-		Echvi_4109	0.23	-1.0
4,922,905	+		Echvi_4109	0.35	-1.1
4,922,906	-		Echvi_4109	0.36	-3.1
4,922,909	-		Echvi_4109	0.36	-0.3
4,922,912	+		Echvi_4109	0.37	-0.4
4,922,912	+		Echvi_4109	0.37	-0.8
4,922,913	-		Echvi_4109	0.37	+0.3
4,922,913	-		Echvi_4109	0.37	+3.1
4,922,913	-		Echvi_4109	0.37	+1.4
4,922,913	-		Echvi_4109	0.37	-1.8
4,922,957	+		Echvi_4109	0.50	+0.1
4,922,957	+		Echvi_4109	0.50	+1.0
4,923,007	+		Echvi_4109	0.63	+4.1
4,923,040	+		Echvi_4109	0.72	+1.4
4,923,040	+		Echvi_4109	0.72	+1.0
4,923,064	+		Echvi_4109	0.79	-0.2
4,923,064	+		Echvi_4109	0.79	-1.4
4,923,066	+		Echvi_4109	0.80	-2.8
4,923,083	-		Echvi_4109	0.84	-2.0
4,923,120	-				-1.2
4,923,120	-				-1.2
4,923,132	-				-0.3
4,923,132	-				-1.0
4,923,156	-				-0.9
4,923,158	-				+2.4
4,923,158	-				-0.6
4,923,158	-				-1.6
4,923,162	+				+0.7
4,923,170	+				+1.7
4,923,180	+				+1.9
4,923,222	+				-1.2
4,923,222	+				-2.6
4,923,222	+				+2.0
4,923,222	+				-1.2
4,923,222	+				-1.0
4,923,298	+				-1.8
4,923,299	-				-0.1
4,923,449	-		Echvi_4110	0.11	+0.7
4,923,463	-		Echvi_4110	0.12	-1.4
4,923,508	+		Echvi_4110	0.14	+0.7
4,923,509	-		Echvi_4110	0.14	-0.6
4,923,547	+		Echvi_4110	0.15	+1.9
4,923,684	+		Echvi_4110	0.21	-0.5
4,923,708	+		Echvi_4110	0.22	-1.2
4,923,765	+		Echvi_4110	0.24	+1.4
4,923,766	-		Echvi_4110	0.24	-2.2
4,923,768	+		Echvi_4110	0.24	-0.3