Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4084

Experiment: m.b. D-Cycloserine 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.064 mg/ml
4,901,039	+		Echvi_4083	0.87	+3.2
4,901,039	+		Echvi_4083	0.87	+2.2
4,901,039	+		Echvi_4083	0.87	+2.7
4,901,039	+		Echvi_4083	0.87	+3.3
4,901,040	-		Echvi_4083	0.87	+2.5
4,901,040	-		Echvi_4083	0.87	+1.7
4,901,040	-		Echvi_4083	0.87	+2.8
4,901,040	-		Echvi_4083	0.87	+4.1
4,901,040	-		Echvi_4083	0.87	+0.9
4,901,040	-		Echvi_4083	0.87	+3.4
4,901,041	+		Echvi_4083	0.87	+3.6
4,901,041	+		Echvi_4083	0.87	+2.4
4,901,041	+		Echvi_4083	0.87	+2.3
4,901,042	-		Echvi_4083	0.87	+3.2
4,901,170	+		Echvi_4083	0.89	+3.7
4,901,171	-		Echvi_4083	0.89	+3.3
4,901,187	+		Echvi_4083	0.89	+3.1
4,901,187	+		Echvi_4083	0.89	+1.7
4,901,187	+		Echvi_4083	0.89	+3.1
4,901,213	+		Echvi_4083	0.89	+0.9
4,901,213	+		Echvi_4083	0.89	+2.8
4,901,213	+		Echvi_4083	0.89	+3.8
4,901,213	+		Echvi_4083	0.89	+3.1
4,901,213	+		Echvi_4083	0.89	+3.0
4,901,213	+		Echvi_4083	0.89	+3.4
4,901,213	+		Echvi_4083	0.89	+2.9
4,901,214	-		Echvi_4083	0.89	+3.1
4,901,214	-		Echvi_4083	0.89	+2.2
4,901,214	-		Echvi_4083	0.89	+3.0
4,901,214	-		Echvi_4083	0.89	+2.7
4,901,215	+		Echvi_4083	0.89	+2.2
4,901,216	-		Echvi_4083	0.89	+3.8
4,901,303	-				+2.5
4,901,351	-				+2.2
4,901,351	-				+0.9
4,901,354	+				+3.0
4,901,354	+				+2.5
4,901,355	-				+4.0
4,901,355	-				+3.2
4,901,355	-				+2.7
4,901,355	-				+2.2
4,901,355	-				+2.3
4,901,355	-				+3.5
4,901,355	-				+2.8
4,901,356	+				+2.6
4,901,356	+				+3.3
4,901,356	+				+3.0
4,901,357	-				+3.2
4,901,357	-				+2.9
4,901,357	-				+2.1
4,901,357	-				+3.8
4,901,366	+				+2.8
4,901,366	+				+3.0
4,901,366	+				+2.3
4,901,366	+				+2.7
4,901,366	+				+3.5
4,901,367	-				+3.2
4,901,367	-				+2.7
4,901,367	-				+3.1
4,901,367	-				+2.2
4,901,367	-				+2.0
4,901,367	-				+3.0
4,901,367	-				+3.4
4,901,421	-				+3.2
4,901,421	-				+2.6
4,901,466	-				+2.6
4,901,474	+				-0.9
4,901,475	-				+3.5
4,901,475	-				+2.5
4,901,475	-				+2.3
4,901,476	+				+3.4
4,901,476	+				+3.1
4,901,477	-				+3.0
4,901,477	-				+3.1
4,901,485	-				+1.1
4,901,488	+				+3.6
4,901,488	+				+1.8
4,901,489	-				+2.6
4,901,489	-				+2.7
4,901,489	-				+2.6
4,901,569	-				+2.4
4,901,584	+				+3.4
4,901,585	-				+2.5
4,901,688	+				+3.4
4,901,740	-				+2.9
4,901,740	-				-1.7
4,901,826	+				+2.6
4,901,826	+				+3.5
4,901,827	-				+2.6
4,901,827	-				+3.2
4,901,832	+				+2.6
4,901,832	+				+2.6
4,901,845	-				+2.9
4,901,849	+				+3.4
4,901,849	+				+2.8
4,901,849	+				+3.7
4,901,849	+				+2.5
4,901,849	+				+3.1
4,901,849	+				+3.0
4,901,849	+				+2.9
4,901,849	+				+3.9
4,901,850	-				+3.1
4,901,850	-				+2.8
4,901,851	+				+2.9
4,901,851	+				+3.1
4,901,852	-				+2.5
4,901,852	-				+1.2
4,901,852	-				+3.1
4,901,882	+				+2.4
4,901,883	-				+3.0
4,901,883	-				+2.4
4,901,883	-				+2.8
4,901,898	+				-0.1
4,901,898	+				-1.0
4,901,898	+				-1.4
4,901,978	+				+0.4
4,901,979	-				+0.1
4,902,032	-				-1.5
4,902,033	+				-2.6
4,902,038	+				-2.9
4,902,038	+				-2.5
4,902,038	+				-1.4
4,902,063	+				-0.6
4,902,241	+		Echvi_4084	0.53	+1.2
4,902,253	+		Echvi_4084	0.57	-2.4
4,902,254	-		Echvi_4084	0.57	-1.1
4,902,414	+				-0.1
4,902,437	+				-1.3
4,902,468	-				-1.0
4,902,468	-				-2.9
4,902,470	+				-0.1
4,902,660	+		Echvi_4085	0.22	-2.0
4,902,660	+		Echvi_4085	0.22	+0.2
4,902,662	+		Echvi_4085	0.24	+0.5
4,902,683	+		Echvi_4085	0.41	-2.3
4,902,770	+				-0.4
4,902,856	+				-0.6
4,903,049	-		Echvi_4086	0.26	+0.6
4,903,411	-		Echvi_4086	0.80	+2.2