Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4054

Experiment: m.b. D-Cycloserine 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.064 mg/ml
4,861,219	-		Echvi_4052	0.60	+1.2
4,861,219	-		Echvi_4052	0.60	-1.3
4,861,231	-		Echvi_4052	0.61	-1.9
4,861,313	+		Echvi_4052	0.72	+0.5
4,861,314	-		Echvi_4052	0.72	-1.8
4,861,399	+		Echvi_4052	0.83	-0.3
4,861,400	-		Echvi_4052	0.83	-1.3
4,861,400	-		Echvi_4052	0.83	+4.5
4,861,402	+		Echvi_4052	0.83	+2.9
4,861,403	-		Echvi_4052	0.83	+0.2
4,861,403	-		Echvi_4052	0.83	-0.1
4,861,474	-				-1.6
4,861,507	+				-0.4
4,861,507	+				-3.2
4,861,508	-				+0.5
4,861,508	-				-0.3
4,861,509	+				-4.8
4,861,509	+				-3.1
4,861,510	-				+0.6
4,861,510	-				+0.9
4,861,515	-				+0.8
4,861,517	+				-1.9
4,861,517	+				+2.8
4,861,518	-				+0.1
4,861,541	+				-0.5
4,861,542	-				-2.6
4,861,542	-				-0.6
4,861,664	-		Echvi_4053	0.22	+0.4
4,862,046	+				+1.5
4,862,047	-				-0.7
4,862,263	+		Echvi_4054	0.22	+0.5
4,862,288	+		Echvi_4054	0.27	+1.6
4,862,319	-		Echvi_4054	0.34	+1.3
4,862,319	-		Echvi_4054	0.34	-0.4
4,862,319	-		Echvi_4054	0.34	-0.0
4,862,342	-		Echvi_4054	0.38	-1.5
4,862,350	-		Echvi_4054	0.40	+0.8
4,862,350	-		Echvi_4054	0.40	+1.7
4,862,416	+		Echvi_4054	0.53	+0.6
4,862,416	+		Echvi_4054	0.53	-1.8
4,862,420	+		Echvi_4054	0.54	+0.6
4,862,420	+		Echvi_4054	0.54	+1.6
4,862,421	-		Echvi_4054	0.54	-1.5
4,862,455	+		Echvi_4054	0.61	+0.8
4,862,553	+		Echvi_4054	0.81	+1.6
4,862,554	-		Echvi_4054	0.81	-0.7
4,862,554	-		Echvi_4054	0.81	-1.8
4,862,592	+		Echvi_4054	0.89	+1.4
4,862,600	+				+2.9
4,862,601	-				-2.9
4,862,621	+				-2.5
4,862,624	-				-0.1
4,862,637	+				+1.4
4,862,659	+				+0.7
4,862,879	+		Echvi_4055	0.30	-2.5
4,862,897	+		Echvi_4055	0.32	-1.4
4,862,898	-		Echvi_4055	0.32	+1.4
4,862,957	+		Echvi_4055	0.40	+1.2
4,863,151	-		Echvi_4055	0.66	-1.4
4,863,262	+		Echvi_4055	0.81	-1.7
4,863,396	-				-0.2
4,863,413	-				-2.3
4,863,459	+				-0.0
4,863,460	-				-0.3
4,863,463	+				+2.2
4,863,463	+				+0.5
4,863,463	+				+2.8
4,863,463	+				-3.2
4,863,464	-				+0.1
4,863,464	-				-0.8
4,863,505	+		Echvi_4056	0.10	+0.9
4,863,621	-		Echvi_4056	0.22	-0.5