Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4010

Experiment: m.b. D-Cycloserine 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.064 mg/ml
4,801,377	-				-1.6
4,801,377	-				-3.3
4,801,396	+				-0.2
4,801,396	+				+0.9
4,801,396	+				-3.0
4,801,397	-				+0.6
4,801,397	-				-1.7
4,801,397	-				-1.4
4,801,411	-				-1.0
4,801,491	+		Echvi_4009	0.15	-0.5
4,801,492	-		Echvi_4009	0.15	-1.6
4,801,504	+		Echvi_4009	0.17	+0.9
4,801,504	+		Echvi_4009	0.17	-0.8
4,801,505	-		Echvi_4009	0.17	+1.2
4,801,541	+		Echvi_4009	0.20	-0.5
4,801,542	-		Echvi_4009	0.20	+1.0
4,801,542	-		Echvi_4009	0.20	-0.0
4,801,542	-		Echvi_4009	0.20	-1.8
4,801,542	-		Echvi_4009	0.20	+1.1
4,801,561	+		Echvi_4009	0.22	+1.4
4,801,561	+		Echvi_4009	0.22	+1.4
4,801,616	-		Echvi_4009	0.28	-1.6
4,801,712	+		Echvi_4009	0.37	-2.0
4,801,763	+		Echvi_4009	0.42	+1.0
4,801,773	+		Echvi_4009	0.43	-1.2
4,801,909	+		Echvi_4009	0.56	+0.9
4,801,995	+		Echvi_4009	0.65	+0.1
4,802,016	+		Echvi_4009	0.67	-2.3
4,802,017	-		Echvi_4009	0.67	-0.7
4,802,044	-		Echvi_4009	0.70	-1.0
4,802,219	-		Echvi_4009	0.87	-0.8
4,802,255	+				+2.9
4,802,255	+				+0.5
4,802,337	+				+1.1
4,802,354	+				+1.1
4,802,354	+				-0.8
4,802,354	+				+2.6
4,802,465	+		Echvi_4010	0.24	-0.5
4,802,465	+		Echvi_4010	0.24	-0.9
4,802,507	+		Echvi_4010	0.34	-1.6
4,802,507	+		Echvi_4010	0.34	-1.0
4,802,507	+		Echvi_4010	0.34	-0.2
4,802,508	-		Echvi_4010	0.34	+0.5
4,802,587	+		Echvi_4010	0.53	-2.4
4,802,639	-		Echvi_4010	0.65	-1.0
4,802,671	+		Echvi_4010	0.73	-3.0
4,802,692	-		Echvi_4010	0.78	-2.2
4,802,750	+				-2.5
4,802,750	+				-0.5
4,802,750	+				-0.7
4,802,751	-				+0.7
4,802,751	-				-0.7
4,802,751	-				-0.5
4,802,751	-				-2.0
4,802,886	+				+1.3
4,802,886	+				-2.9
4,802,938	+				+1.3
4,802,949	+				+2.1
4,802,949	+				-1.7
4,802,949	+				-1.7
4,802,949	+				+0.1
4,803,023	+				-4.6
4,803,023	+				+2.1
4,803,041	+				-0.2
4,803,041	+				-3.0
4,803,111	+		Echvi_4011	0.14	+1.3
4,803,136	+		Echvi_4011	0.20	-1.2
4,803,136	+		Echvi_4011	0.20	+2.0
4,803,136	+		Echvi_4011	0.20	-1.5
4,803,138	+		Echvi_4011	0.21	+1.5
4,803,138	+		Echvi_4011	0.21	-1.6
4,803,139	-		Echvi_4011	0.21	-1.5
4,803,139	-		Echvi_4011	0.21	-2.2
4,803,198	+		Echvi_4011	0.37	-0.5
4,803,199	-		Echvi_4011	0.37	+0.3
4,803,199	-		Echvi_4011	0.37	-4.0
4,803,208	+		Echvi_4011	0.39	+1.1
4,803,242	+		Echvi_4011	0.49	-2.0
4,803,242	+		Echvi_4011	0.49	+0.4
4,803,243	-		Echvi_4011	0.49	-0.6
4,803,348	-		Echvi_4011	0.77	-1.2
4,803,353	+		Echvi_4011	0.78	-3.8
4,803,353	+		Echvi_4011	0.78	+0.1
4,803,354	-		Echvi_4011	0.78	+0.6
4,803,390	+		Echvi_4011	0.88	-1.7
4,803,390	+		Echvi_4011	0.88	+1.4
4,803,391	-		Echvi_4011	0.88	-1.9
4,803,448	+				+0.4
4,803,449	-				+0.9
4,803,449	-				-0.3
4,803,449	-				+1.1
4,803,506	+				+1.1
4,803,507	-				+2.2
4,803,507	-				-1.8
4,803,578	-				+0.8
4,803,662	+		Echvi_4012	0.11	-0.6
4,803,693	-		Echvi_4012	0.13	-0.2
4,803,700	-		Echvi_4012	0.14	-0.4
4,803,740	-		Echvi_4012	0.17	+0.5
4,803,743	+		Echvi_4012	0.17	-1.2
4,803,759	-		Echvi_4012	0.18	-2.3